Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049613
CDS Infomation

pacid=37433703 polypeptide=PGSC0003DMP400033488 locus=PGSC0003DMG400019274 ID=PGSC0003DMT400049613.v4.03 annot-version=v4.03
Sequence

ATGCCTGAGGCACCAAAATCAGATGTTGTTACTGAAAACAACAAGCAAGTTCTTCATTTT
ATTGAAGAAGTTACCACAAATGCTGATGAAATTCAAAAGAAAGTCCTTGCTGAAATACTA
ACAAAAAATGCTTATGTTGAGTATTTGCAGCGCCATGGCCTTAATGGTCATATTGATAGA
GAAAATTTCAAGAAAATCATGCCTGCTATTACTTATGAGGATATTCAATCTGATATCACT
CGTATCGCCAATGGCGATAAATCTCAAATCCTCTGCTCTCAACCCATCTCTGAGTTTTTA
ACAAGTTCCGGTACGTCTGGTGGGGAACGAAAACTGATGCCAACGATTGAGGAGGAACTT
GCAAGAAGATCACAGCTTTACAGTCTTTTAATGCCTGTGATGAGTCAATTTGTTCCAGAC
CTTGAAAAAGGAAAAGGAATGTATTTTTTGTTTATAAAATCAGAGGCTAAAACACCAGGT
GGATTACCAGCTCGTCCTGTTTTAACAAGTTATTATAAAAGCCCTCATTTCAAAAATAGG
CGTCCTGATCCATACACTAACTACACGAGCCCCAACGATACGATTCTCTGTTCTGATTCA
TACCAAAGTATGTATTCCCAAATGCTTTGTGGTCTATGCCAAAACAAAGAAGTTCTTCGT
GTTGGGGCTGTTTTTGCCTCAGGTTTTATCCGTGCTATTCGATTCCTAGAAAAGCATTGG
CCACTTCTTTGTCATGATATCAGAGCCGGAACCATTAATTCCCAAATCACTGATCTCTCA
GTTCGAGAGGCGGTGATGAAGATCCTTAAACCAGATAAAAATTTAGCTGATTTTGTTGAG
GCTGAATGTAGTAAAGATTCATGGCAAGGGATTATTACTAGATTGTGGCCTAATACCAAA
TACATAGATGTCATTGTGACTGGTACTATGTCACAATATATACCAACTCTTGATTACTAT
AGCAATGGTTTGCCTCTTGTTTGCACTATGTATGCTTCTTCTGAGTGCTATTTTGGTGTC
AATTTGAACCCCCTTTGTAAGCCTAGTGAAGTTGCTTATACCCTTATTCCTACTATGGGG
TATTTTGAATTCTTGCCTGTTCATCGAAACAATGGTGTGACGAATTCTATTTCCATGCCT
AAATCACTTAATGAGAAAGAACAACAAGAATTGGTTGATTTAGTTGATGTCAAGATTGGG
CAAGAGTATGAGCTTATTGTCACAACATATGCTGGGCTTTATAGGTATCGTGTAGGCGAT
GTGCTACGTGTAGCTGGATTCAAGAACAACGCGCCTCAATTCAACTTCATATGTAGGAAG
AATGTGGTGCTAAGTATTGATTCAGACAAGACAGATGAAGTTGAACTACAAAATGCAGTA
AAAAATGCAGTGACACATCTTATGCCATTTGATGCACATGTGACAGAATACACAAGTTAT
GCTGATACAACAACAACAATTCCAGGGCATTATGTGTTATACTGGGAGCTGAATGTGAAT
GGATCAACCCCAGTTCCTCCATCTGTTTTCGAAGATTGTTGCCTCACTATCGAAGAGTCC
CTCAACAGTGTATACCGTCAGGGACGTGCCTCGGACAAGTCCATCGGGCCATTGGAAATC
AAGATTGTTGAAAGTGGTACTTTTGACAAGTTAATGGACTATGCTATAAGTTTAGGTGCT
TCAATAAATCAGTACAAGACGCCAAGATGTGTGAAATTTGAACCCATTGTTGAGTTATTG
AATTCAAAAGTAGTGTCAAACTACTTTAGCCCCAAATGCCCAAAATGGGTGCCAGGACAC
AAGCAATGGAACAACATGAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033488
PEP Infomation

pacid=37433703 transcript=PGSC0003DMT400049613 locus=PGSC0003DMG400019274 ID=PGSC0003DMT400049613.v4.03 annot-version=v4.03
Sequence

MPEAPKSDVVTENNKQVLHFIEEVTTNADEIQKKVLAEILTKNAYVEYLQRHGLNGHIDR
ENFKKIMPAITYEDIQSDITRIANGDKSQILCSQPISEFLTSSGTSGGERKLMPTIEEEL
ARRSQLYSLLMPVMSQFVPDLEKGKGMYFLFIKSEAKTPGGLPARPVLTSYYKSPHFKNR
RPDPYTNYTSPNDTILCSDSYQSMYSQMLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHW
PLLCHDIRAGTINSQITDLSVREAVMKILKPDKNLADFVEAECSKDSWQGIITRLWPNTK
YIDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVAYTLIPTMG
YFEFLPVHRNNGVTNSISMPKSLNEKEQQELVDLVDVKIGQEYELIVTTYAGLYRYRVGD
VLRVAGFKNNAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLMPFDAHVTEYTSY
ADTTTTIPGHYVLYWELNVNGSTPVPPSVFEDCCLTIEESLNSVYRQGRASDKSIGPLEI
KIVESGTFDKLMDYAISLGASINQYKTPRCVKFEPIVELLNSKVVSNYFSPKCPKWVPGH
KQWNNMN*

Transcript Sequence

Transcript ID

PGSC0003DMT400049613
Transcript Infomation

pacid=37433703 locus=PGSC0003DMG400019274 ID=PGSC0003DMT400049613.v4.03 annot-version=v4.03
Sequence

ATGCCTGAGGCACCAAAATCAGATGTTGTTACTGAAAACAACAAGCAAGTTCTTCATTTT
ATTGAAGAAGTTACCACAAATGCTGATGAAATTCAAAAGAAAGTCCTTGCTGAAATACTA
ACAAAAAATGCTTATGTTGAGTATTTGCAGCGCCATGGCCTTAATGGTCATATTGATAGA
GAAAATTTCAAGAAAATCATGCCTGCTATTACTTATGAGGATATTCAATCTGATATCACT
CGTATCGCCAATGGCGATAAATCTCAAATCCTCTGCTCTCAACCCATCTCTGAGTTTTTA
ACAAGTTCCGGTACGTCTGGTGGGGAACGAAAACTGATGCCAACGATTGAGGAGGAACTT
GCAAGAAGATCACAGCTTTACAGTCTTTTAATGCCTGTGATGAGTCAATTTGTTCCAGAC
CTTGAAAAAGGAAAAGGAATGTATTTTTTGTTTATAAAATCAGAGGCTAAAACACCAGGT
GGATTACCAGCTCGTCCTGTTTTAACAAGTTATTATAAAAGCCCTCATTTCAAAAATAGG
CGTCCTGATCCATACACTAACTACACGAGCCCCAACGATACGATTCTCTGTTCTGATTCA
TACCAAAGTATGTATTCCCAAATGCTTTGTGGTCTATGCCAAAACAAAGAAGTTCTTCGT
GTTGGGGCTGTTTTTGCCTCAGGTTTTATCCGTGCTATTCGATTCCTAGAAAAGCATTGG
CCACTTCTTTGTCATGATATCAGAGCCGGAACCATTAATTCCCAAATCACTGATCTCTCA
GTTCGAGAGGCGGTGATGAAGATCCTTAAACCAGATAAAAATTTAGCTGATTTTGTTGAG
GCTGAATGTAGTAAAGATTCATGGCAAGGGATTATTACTAGATTGTGGCCTAATACCAAA
TACATAGATGTCATTGTGACTGGTACTATGTCACAATATATACCAACTCTTGATTACTAT
AGCAATGGTTTGCCTCTTGTTTGCACTATGTATGCTTCTTCTGAGTGCTATTTTGGTGTC
AATTTGAACCCCCTTTGTAAGCCTAGTGAAGTTGCTTATACCCTTATTCCTACTATGGGG
TATTTTGAATTCTTGCCTGTTCATCGAAACAATGGTGTGACGAATTCTATTTCCATGCCT
AAATCACTTAATGAGAAAGAACAACAAGAATTGGTTGATTTAGTTGATGTCAAGATTGGG
CAAGAGTATGAGCTTATTGTCACAACATATGCTGGGCTTTATAGGTATCGTGTAGGCGAT
GTGCTACGTGTAGCTGGATTCAAGAACAACGCGCCTCAATTCAACTTCATATGTAGGAAG
AATGTGGTGCTAAGTATTGATTCAGACAAGACAGATGAAGTTGAACTACAAAATGCAGTA
AAAAATGCAGTGACACATCTTATGCCATTTGATGCACATGTGACAGAATACACAAGTTAT
GCTGATACAACAACAACAATTCCAGGGCATTATGTGTTATACTGGGAGCTGAATGTGAAT
GGATCAACCCCAGTTCCTCCATCTGTTTTCGAAGATTGTTGCCTCACTATCGAAGAGTCC
CTCAACAGTGTATACCGTCAGGGACGTGCCTCGGACAAGTCCATCGGGCCATTGGAAATC
AAGATTGTTGAAAGTGGTACTTTTGACAAGTTAATGGACTATGCTATAAGTTTAGGTGCT
TCAATAAATCAGTACAAGACGCCAAGATGTGTGAAATTTGAACCCATTGTTGAGTTATTG
AATTCAAAAGTAGTGTCAAACTACTTTAGCCCCAAATGCCCAAAATGGGTGCCAGGACAC
AAGCAATGGAACAACATGAACTAA