Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049594
CDS Infomation

pacid=37432484 polypeptide=PGSC0003DMP400033474 locus=PGSC0003DMG400019264 ID=PGSC0003DMT400049594.v4.03 annot-version=v4.03
Sequence

ATGGCTCCTACCAGGAACCAGAACAGAGCGCCTCTTCCTTCTAGTCCTTCCAATAGTAAG
TATGCGACAGATGACATAACAGTAGAGAAGAAGAGGAAAATTGCGAATCCGAGAATGCCG
ACTGCAGCTACTGGTGGTAGACCAATTAGGCAAGCATTTGCAGTGGTGAATGCGGCACCA
GATCTGGCTCCAGCCAGTGGACCACCAAGTACTACTGGTTCAGATAGCCCTGTCTTTGAG
TTTACAAAAGAGGATGTCGAAGCTTTACTGGCGGAGAAATTGAAAACTAAGAACAAGTTT
AACACTAAGGAAAAGTGTGATCTCATGTCAGAATACATAAGAAGACTTAAGCTTTGCATT
AAGTGGTTCCAGCAGCTTGAAGAAAACAATGTCACACAACAAGCATCACTTAAAAGTTTG
TTAGAGTCAGCAGAAAAGAAATGCAACGAGATGGAGGGCTTAATGAAAGCCAAAGAGGAA
GAGTTGAATTCAATCATAATGGAGTTAAGGAAAACCATTGAAGCTCTGCAAGAAAAGTGT
GCAAAAGAGGAGTCAGCCAAATTGGAAGCGATGGATTCTTTTAGTAGAGAGAAAGAGGCT
AGAGATGCAGCAGAGAAACTGCAAGCTTCAGTTTCTGAAGAGCTCAAGAGATCTCAACAA
GACAACTCAAGTGCAACTCAAAAGATTCAATCACTAAATGAAATGTACAAGCGGTTACAG
GAGTATAATACAAGTTTACAGCAGTACAACAGTAAGCTCCAGTCCGAACTTGCTTCAACA
AATGAAACATTGAAGCGAGTGGAGAAGGAGAAAGCTGCTGTTTTTGAAAATCTCAGCACT
CTCAGAGGTCACTATACTTCTTTGCAGGAACAGCTCTCTTCTTCTAGAGCTGTTCAAGAT
GAGGCTGTCAAACAAAAAGAAACTTTAGCAAGTGAAGTTGGATGTTTGCGGGGAGATTTA
CAAAAGATGAGGGATGATCGTGATCAACAGTTGTATCAAGTCCAGGTTCTAAATGCTGAA
TTACTAAAATATAAGGAATGTAATGGGAAATCTGTTGCTGAGTTAGAGAACATGACAGTA
AGGGCAAACGAGCTGGAGGCAAGTTGTCTGTCTCAATCTGAACAAATTAACAGATTGCAA
GAAAAACTTACTTTTGCAGAGAAGAGATTAGAGATGTCCGACATGTCAGCACTCGAAACC
AGATCAGAATATGAGGAGCAAAAGAAAGTAATTTTTGATTTGCGTCAGCGTCTTGTTGAT
GCAGAAACAAAAGTTGTGGAAGGAGAGAAACTTCGGAAAAAATTGCACAATACTATACTG
GAACTGAAAGGCAACATACGGGTTTTCTGTAGAGTGAGACCTTTATTATCTGAAGACGGT
GTTGGTGCAGAAGCAAATGTCGTCTCTTTTCCATCTTCAATGGAAGCACAAGGGAGAGGC
ATTGACTTGGCACAAAATGGACAAAAGCATTCCTTCACATTTGACAAAGTTTTCACGCCC
GAGGCTTCACAAGAAGATGTTTTTGTTGAGATATCCCAGCTTGTACAGAGTGCTCTTGAT
GGTTATAAGGTTTGCATATTTGCCTATGGACAAACTGGTTCTGGCAAGACATATACAATG
ATGGGCAACCCAGAAAGTGCAGAGAATAAAGGACTAATACCTCGCACTTTAGAACAGGTA
TTTGAGACCCGGCAGTCTCTTCAAGCACAAGGGTGGAAATATGAAATGCAGGTCTCAATG
CTTGAAATATACAACGAGACTATTCGAGACCTTTTGTCAGGTTTCGATGTTTCAAGACCA
GAAAATGGCGGAAAGCAATATACAATCAAACATGATGCAAATGGCCACACCCATGTCTCA
GATCTGACAGTTGTAGATGTTCAAAGTAGTAGCAAGGTCTCTTCTCTTCTAAGGCGGGCT
GCACAAAGCAGGTCTGTTGGCAAGACTCAGATGAATGAAAATTCTTCAAGAAGTCATTTT
GTTTTCACTTTAAGAATTTCGGGTGTTAATGAGAGCACAGAACAACAAGTACAAGGCGTA
CTCAATTTGATTGATCTTGCTGGCAGTGAGCGCCTATCTAAGAGTGGGTCTACTGGAGAT
CGGTTGAAAGAAACTCAGGCTATCAACAAGAGTTTATCATCTTTAAGTGATGTTATATTT
GCTCTTGCAAAGAAAGAGGAGCATGTACCATTTAGGAACTCAAAGCTTACATACCTTCTC
CAGCCTTGTCTAGGTGGTGACTCGAAGACGTTGATGTTTGTCAATGTAGCACCAGATCCT
TCTTCTACTGGTGAGTCCCTATGTTCACTCCGATTTGCAGCAAGGGTTAACGCGTGTGAG
ATTGGGATTCCAAGACGTCAAACAAGCATGCGTTCATCAGATTCTCGCTTGAGCATTGGC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400033474
PEP Infomation

pacid=37432484 transcript=PGSC0003DMT400049594 locus=PGSC0003DMG400019264 ID=PGSC0003DMT400049594.v4.03 annot-version=v4.03
Sequence

MAPTRNQNRAPLPSSPSNSKYATDDITVEKKRKIANPRMPTAATGGRPIRQAFAVVNAAP
DLAPASGPPSTTGSDSPVFEFTKEDVEALLAEKLKTKNKFNTKEKCDLMSEYIRRLKLCI
KWFQQLEENNVTQQASLKSLLESAEKKCNEMEGLMKAKEEELNSIIMELRKTIEALQEKC
AKEESAKLEAMDSFSREKEARDAAEKLQASVSEELKRSQQDNSSATQKIQSLNEMYKRLQ
EYNTSLQQYNSKLQSELASTNETLKRVEKEKAAVFENLSTLRGHYTSLQEQLSSSRAVQD
EAVKQKETLASEVGCLRGDLQKMRDDRDQQLYQVQVLNAELLKYKECNGKSVAELENMTV
RANELEASCLSQSEQINRLQEKLTFAEKRLEMSDMSALETRSEYEEQKKVIFDLRQRLVD
AETKVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLSEDGVGAEANVVSFPSSMEAQGRG
IDLAQNGQKHSFTFDKVFTPEASQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTM
MGNPESAENKGLIPRTLEQVFETRQSLQAQGWKYEMQVSMLEIYNETIRDLLSGFDVSRP
ENGGKQYTIKHDANGHTHVSDLTVVDVQSSSKVSSLLRRAAQSRSVGKTQMNENSSRSHF
VFTLRISGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIF
ALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNVAPDPSSTGESLCSLRFAARVNACE
IGIPRRQTSMRSSDSRLSIG*

Transcript Sequence

Transcript ID

PGSC0003DMT400049594
Transcript Infomation

pacid=37432484 locus=PGSC0003DMG400019264 ID=PGSC0003DMT400049594.v4.03 annot-version=v4.03
Sequence

ATGGCTCCTACCAGGAACCAGAACAGAGCGCCTCTTCCTTCTAGTCCTTCCAATAGTAAG
TATGCGACAGATGACATAACAGTAGAGAAGAAGAGGAAAATTGCGAATCCGAGAATGCCG
ACTGCAGCTACTGGTGGTAGACCAATTAGGCAAGCATTTGCAGTGGTGAATGCGGCACCA
GATCTGGCTCCAGCCAGTGGACCACCAAGTACTACTGGTTCAGATAGCCCTGTCTTTGAG
TTTACAAAAGAGGATGTCGAAGCTTTACTGGCGGAGAAATTGAAAACTAAGAACAAGTTT
AACACTAAGGAAAAGTGTGATCTCATGTCAGAATACATAAGAAGACTTAAGCTTTGCATT
AAGTGGTTCCAGCAGCTTGAAGAAAACAATGTCACACAACAAGCATCACTTAAAAGTTTG
TTAGAGTCAGCAGAAAAGAAATGCAACGAGATGGAGGGCTTAATGAAAGCCAAAGAGGAA
GAGTTGAATTCAATCATAATGGAGTTAAGGAAAACCATTGAAGCTCTGCAAGAAAAGTGT
GCAAAAGAGGAGTCAGCCAAATTGGAAGCGATGGATTCTTTTAGTAGAGAGAAAGAGGCT
AGAGATGCAGCAGAGAAACTGCAAGCTTCAGTTTCTGAAGAGCTCAAGAGATCTCAACAA
GACAACTCAAGTGCAACTCAAAAGATTCAATCACTAAATGAAATGTACAAGCGGTTACAG
GAGTATAATACAAGTTTACAGCAGTACAACAGTAAGCTCCAGTCCGAACTTGCTTCAACA
AATGAAACATTGAAGCGAGTGGAGAAGGAGAAAGCTGCTGTTTTTGAAAATCTCAGCACT
CTCAGAGGTCACTATACTTCTTTGCAGGAACAGCTCTCTTCTTCTAGAGCTGTTCAAGAT
GAGGCTGTCAAACAAAAAGAAACTTTAGCAAGTGAAGTTGGATGTTTGCGGGGAGATTTA
CAAAAGATGAGGGATGATCGTGATCAACAGTTGTATCAAGTCCAGGTTCTAAATGCTGAA
TTACTAAAATATAAGGAATGTAATGGGAAATCTGTTGCTGAGTTAGAGAACATGACAGTA
AGGGCAAACGAGCTGGAGGCAAGTTGTCTGTCTCAATCTGAACAAATTAACAGATTGCAA
GAAAAACTTACTTTTGCAGAGAAGAGATTAGAGATGTCCGACATGTCAGCACTCGAAACC
AGATCAGAATATGAGGAGCAAAAGAAAGTAATTTTTGATTTGCGTCAGCGTCTTGTTGAT
GCAGAAACAAAAGTTGTGGAAGGAGAGAAACTTCGGAAAAAATTGCACAATACTATACTG
GAACTGAAAGGCAACATACGGGTTTTCTGTAGAGTGAGACCTTTATTATCTGAAGACGGT
GTTGGTGCAGAAGCAAATGTCGTCTCTTTTCCATCTTCAATGGAAGCACAAGGGAGAGGC
ATTGACTTGGCACAAAATGGACAAAAGCATTCCTTCACATTTGACAAAGTTTTCACGCCC
GAGGCTTCACAAGAAGATGTTTTTGTTGAGATATCCCAGCTTGTACAGAGTGCTCTTGAT
GGTTATAAGGTTTGCATATTTGCCTATGGACAAACTGGTTCTGGCAAGACATATACAATG
ATGGGCAACCCAGAAAGTGCAGAGAATAAAGGACTAATACCTCGCACTTTAGAACAGGTA
TTTGAGACCCGGCAGTCTCTTCAAGCACAAGGGTGGAAATATGAAATGCAGGTCTCAATG
CTTGAAATATACAACGAGACTATTCGAGACCTTTTGTCAGGTTTCGATGTTTCAAGACCA
GAAAATGGCGGAAAGCAATATACAATCAAACATGATGCAAATGGCCACACCCATGTCTCA
GATCTGACAGTTGTAGATGTTCAAAGTAGTAGCAAGGTCTCTTCTCTTCTAAGGCGGGCT
GCACAAAGCAGGTCTGTTGGCAAGACTCAGATGAATGAAAATTCTTCAAGAAGTCATTTT
GTTTTCACTTTAAGAATTTCGGGTGTTAATGAGAGCACAGAACAACAAGTACAAGGCGTA
CTCAATTTGATTGATCTTGCTGGCAGTGAGCGCCTATCTAAGAGTGGGTCTACTGGAGAT
CGGTTGAAAGAAACTCAGGCTATCAACAAGAGTTTATCATCTTTAAGTGATGTTATATTT
GCTCTTGCAAAGAAAGAGGAGCATGTACCATTTAGGAACTCAAAGCTTACATACCTTCTC
CAGCCTTGTCTAGGTGGTGACTCGAAGACGTTGATGTTTGTCAATGTAGCACCAGATCCT
TCTTCTACTGGTGAGTCCCTATGTTCACTCCGATTTGCAGCAAGGGTTAACGCGTGTGAG
ATTGGGATTCCAAGACGTCAAACAAGCATGCGTTCATCAGATTCTCGCTTGAGCATTGGC
TAA