Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049576
CDS Infomation

pacid=37434740 polypeptide=PGSC0003DMP400033463 locus=PGSC0003DMG400019259 ID=PGSC0003DMT400049576.v4.03 annot-version=v4.03
Sequence

ATGGGAGGTAATAATAAACAAGGCATGTTTAGATTTGCTGATAAAAAAGATAAGTTGTTA
ATGTTCTTTGGAACATTAGGTAGTATGGGAGATGGTCTTCAGATTCCTCTAATGATGTTT
GTGCTTAGTGATGTAATTAATGATTATGGAAATCTAAGTAACTCTGTTTCTATGAAGACT
GTCAACAAGTATTCTCTCAGGTTACTCTATGTTGCATTTGGAGTTGGACTGGCTGCTTTT
GTTGAAGGATTATGTTGGGCAAGAACTGCAGAAAGACAAACATCTAGAATGAGATTAGAG
TACCTAAAATCTGTTCTAAGGCAAGAAGTTGGATTTTTCGATACACAGGCAGCTGAATCT
TCCACTACTTATCAAGTAATTTCGACTGTATCAGCTGATTCAACTACCATCCAAATCACC
ATAGGCGAGAAGATACCTGATTGCCTGGCTTACATGTCATCCTTCCTGTTCTGTCATATC
TTTGCCTTTCTACTCTCATGGAAGATCACGTTGGCCGCGATACCATTCACCTTAATGTTC
ATCATTCCTGGACTTGGATTTGGTACAATGATGATGAATGTGGGAATGCAGATGATAGAG
TCATATGGAGTCGCCGGGGGAATAGCAGAACAAGCTATCTCTTCTATAAGAACATTGTAC
TCTTATGTGGCTGAGAACCAAACTCTCGAGAAGTTCAGTCAATCGTTGCAGAAAGTTATG
GAACTAGGAATCAAACAAGGCTTTGCTAGAGGGTTGTTGCTAGGTAGCTTGGGAATGGTT
TATATTAGTTGGGCTTTTCAAGCATGGCTGGGATCGATTCTAGTTAGCAAACATGGAGAA
AAAGGAGGTGATGTATTTGTAGCAGGTTTCAATGTTCTTATGGGAGGATTAAACATTCTG
TCGGCTCTTCCAAATCTTACAGCAATCACGGAGGCAAAATCTGCTGCAATTCGGATCACA
GAGATGATTGATCGACAACCTGCAATTGACACTGAAGACAAGAAGGGGAAAGCATTGTCA
TATGTAAGAGGAGAAATCGAATTCAATGGTGTATACTTCAGTTACCCCTCAAGGCCTGAT
ACGCCTATCTTGCAAGGCCTGAATCTTAGAATTTCACCTGGGAAAACTACAGGACTTGTT
GGGGGTAGTGGTTCAGGGAAGTCCACAATCATTTCATTGCTTCAGAGATTCTACGATCCC
ATTGAAGGCGATATTTCGTTGGATGGTCACAAGATAAAGAAACTCCATATAAAGTGGCTG
AGGTCCCAAATAGGTCTGGTTAATCAAGAACCAATTCTCTTTGCAACAACCATAAAAGAG
AACATACTATTTGGCAAAGAGGGAGCAACTATGGAAGAAGTAGAGAAGGCAACAAAAGCT
GCAAATGCTCATGATTTTATTATAAAGTTACCAGATGCATATGAAACTCAGGTTGGGCAA
TTTGGTCTGCAGTTATCTGGAGGACAAAAGCAGCGAATAGCCATAGCGAGGGCTTTGATA
AGAGATCCAAAAGTCCTGCTGCTCGATGAAGCTACAAGTGCATTGGATTCACAATCTGAA
AGAGTTGTACAACAGGCCCTGGATCATGCATCTATGGGAAGAACTGCAATCGTCATAGCT
CACCGTCTGTCCACCATTAGAATGGCGAATAGGATAGTAGTTCTTCAACAAGGGAGAGTA
ATCGAGTCTGGAACACACGAAGAGCTTATGCAAATGACTGATGGCGAAGGTGGAGAGTAT
TACAAAATGGTGCAGCTGCAGCAACTAGCCACATTAAATGATGTTGCCAATACCCCTAAT
CAAAAGACTGGTGGAAGAAGTAGCTATCGAAAAGGTAGTAATACCCCTCAAAGTCCATTC
AACATGATATCTAGTGCAGCAGCCACACCGGTTATGTACTCGTTCAGTCCAGCATTTTCT
AGAAGTACACCATTGTCAGTTCCTTATTCCGTCCAGTACGAAGAATCATATGACAGTTAT
GATAACCATTCCACAAAAGAGGCTCATCCAGCACCTTCACAATTGCGTTTACTCCAAATG
AATGCTCCTGAATGGGGTAGAGCTTTGCTCGGATGCATAGGAGCGATAGGCTCAGGAGCT
GTTCAGCCAATAAATGCCTACTGCGTGGGGGCAGTTATATCTGTTTACTTCCGGCCTGAT
AAATCCTCCATCCAATCCCACGCGAGGATCTATTCTTTCATATTCATAGGTCTTGCTGTT
TTCAACTTCTTCACGAATGTTATCCAACACTACAATTTTGCTGTCATGGGAGAAAGGCTA
ACCAGAAGGATTAGGGAAATGCTGCTTGCCAAACTCATGACGTTTGAGATCAAATGGTTT
GATCAAGACGAGAACACGAGTGCAGCCATATGTGCTCGGCTATCAACTGAAGCAAACATG
GTTCGTTCCCTTGTGGGAGACCGTATGTCATTGCTAGCTCAAGCATTCTTTGCTGCTACA
TTTGCTTATACATTAGGACTTTTCCTAACATGGAAGCTGTCCTTAGTGATGATGGCAGCT
CAGCCTTTGCTCATTGGAAGTTTTTACGCGAGGACTGTACTGATGAAGAGTATGTCTGTA
AAAGCACAGAAAGCTCAAAGAGAGGGAAGCCAATTAGCAAGTGAAGCTGTTATTAATCAT
AGAACAATAACTGCTTTCTCATCTCAGAAAAGGATAGTAGGGCTCTTTAGAGACTCATTA
GAAGGTCCTAGAAAGGAAAGCATACGACAATCTTGGTATGCCGGTATAGGTCTATGTAGC
TCTCAATTCCTAGCTGCAGCTTCTACAGCTTTAGCTTACTGGTATGGCGGAAAACTATTG
TCACAAGGGGACATATCTCCTGAGAAACTTTTTCAAGCATTTCTAGCATTGCTTTTCACT
GCTTATACTATTGCTGAGGCAGGAAGCATGACTAAAGATATATCTAGAGGAAATAATGCT
GTGGGTTCAGTCTTTGCAATCCTCGATAGAAACACTGAGATCAATCCAGATAATTCATCA
GCAATAGATGCAACGAGAACACAAATAAGGGGACGTGTGGAGCTGAAAAGACTATTTTTT
GCTTATCCATCAAGACCAGATCAGCTGATTTTCAGAGGATTAAGCCTCAAGATAAGTGCA
GGAACTACAGTAGCATTAGTTGGACAAAGTGGTTGTGGAAAATCAACGATAATTGGGCTT
ATTGAAAGATTTTATGATCCAGATAAAGGATCAGTCTATATCGACGAAAGGGATGTAAAA
GACTACAACTTGAGATCCCTGAGGCAAAGTATTGCATTAGTTAGCCAAGAACCAACTCTC
TTTGCAGGAACTATCTATGAGAACATTGCATATGGAAAAGAGAACGCCAGCGAATCTGAG
ATAATAAAGGCTGCTGTGCTTGCTAATGCTCATGAATTTATAAGTGGAATGAATGATGGA
TATGAAACACAATGTGGACAAAGGGGAGTGCAACTATCAGGAGGTCAGAAACAACGAATA
GCCATTGCCCGAGCAATACTCAAGAGCCCGAAAATCCTGTTGTTAGATGAAGCAACTAGT
GCTCTTGACACTGTATCTGAAAGCGCGGTCCAAGAAGCACTAGAGAAAATGATGGTTGGA
CGAACATGCATTGTCGTGGCTCATCGCCTTTCTACAATACAGAAAGCTAGTTCCATTGCT
GTTATAAAGGATGGAATAGTTGCAGAACAAGGCTCACATTCTGATCTACTTTCTATAGGA
AAATATGGTTCATATTATTCTTTGGTCAAGTTACAAGGGGGAAACTCTCCTTACAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033463
PEP Infomation

pacid=37434740 transcript=PGSC0003DMT400049576 locus=PGSC0003DMG400019259 ID=PGSC0003DMT400049576.v4.03 annot-version=v4.03
Sequence

MGGNNKQGMFRFADKKDKLLMFFGTLGSMGDGLQIPLMMFVLSDVINDYGNLSNSVSMKT
VNKYSLRLLYVAFGVGLAAFVEGLCWARTAERQTSRMRLEYLKSVLRQEVGFFDTQAAES
STTYQVISTVSADSTTIQITIGEKIPDCLAYMSSFLFCHIFAFLLSWKITLAAIPFTLMF
IIPGLGFGTMMMNVGMQMIESYGVAGGIAEQAISSIRTLYSYVAENQTLEKFSQSLQKVM
ELGIKQGFARGLLLGSLGMVYISWAFQAWLGSILVSKHGEKGGDVFVAGFNVLMGGLNIL
SALPNLTAITEAKSAAIRITEMIDRQPAIDTEDKKGKALSYVRGEIEFNGVYFSYPSRPD
TPILQGLNLRISPGKTTGLVGGSGSGKSTIISLLQRFYDPIEGDISLDGHKIKKLHIKWL
RSQIGLVNQEPILFATTIKENILFGKEGATMEEVEKATKAANAHDFIIKLPDAYETQVGQ
FGLQLSGGQKQRIAIARALIRDPKVLLLDEATSALDSQSERVVQQALDHASMGRTAIVIA
HRLSTIRMANRIVVLQQGRVIESGTHEELMQMTDGEGGEYYKMVQLQQLATLNDVANTPN
QKTGGRSSYRKGSNTPQSPFNMISSAAATPVMYSFSPAFSRSTPLSVPYSVQYEESYDSY
DNHSTKEAHPAPSQLRLLQMNAPEWGRALLGCIGAIGSGAVQPINAYCVGAVISVYFRPD
KSSIQSHARIYSFIFIGLAVFNFFTNVIQHYNFAVMGERLTRRIREMLLAKLMTFEIKWF
DQDENTSAAICARLSTEANMVRSLVGDRMSLLAQAFFAATFAYTLGLFLTWKLSLVMMAA
QPLLIGSFYARTVLMKSMSVKAQKAQREGSQLASEAVINHRTITAFSSQKRIVGLFRDSL
EGPRKESIRQSWYAGIGLCSSQFLAAASTALAYWYGGKLLSQGDISPEKLFQAFLALLFT
AYTIAEAGSMTKDISRGNNAVGSVFAILDRNTEINPDNSSAIDATRTQIRGRVELKRLFF
AYPSRPDQLIFRGLSLKISAGTTVALVGQSGCGKSTIIGLIERFYDPDKGSVYIDERDVK
DYNLRSLRQSIALVSQEPTLFAGTIYENIAYGKENASESEIIKAAVLANAHEFISGMNDG
YETQCGQRGVQLSGGQKQRIAIARAILKSPKILLLDEATSALDTVSESAVQEALEKMMVG
RTCIVVAHRLSTIQKASSIAVIKDGIVAEQGSHSDLLSIGKYGSYYSLVKLQGGNSPYR*

Transcript Sequence

Transcript ID

PGSC0003DMT400049576
Transcript Infomation

pacid=37434740 locus=PGSC0003DMG400019259 ID=PGSC0003DMT400049576.v4.03 annot-version=v4.03
Sequence

ATGGGAGGTAATAATAAACAAGGCATGTTTAGATTTGCTGATAAAAAAGATAAGTTGTTA
ATGTTCTTTGGAACATTAGGTAGTATGGGAGATGGTCTTCAGATTCCTCTAATGATGTTT
GTGCTTAGTGATGTAATTAATGATTATGGAAATCTAAGTAACTCTGTTTCTATGAAGACT
GTCAACAAGTATTCTCTCAGGTTACTCTATGTTGCATTTGGAGTTGGACTGGCTGCTTTT
GTTGAAGGATTATGTTGGGCAAGAACTGCAGAAAGACAAACATCTAGAATGAGATTAGAG
TACCTAAAATCTGTTCTAAGGCAAGAAGTTGGATTTTTCGATACACAGGCAGCTGAATCT
TCCACTACTTATCAAGTAATTTCGACTGTATCAGCTGATTCAACTACCATCCAAATCACC
ATAGGCGAGAAGATACCTGATTGCCTGGCTTACATGTCATCCTTCCTGTTCTGTCATATC
TTTGCCTTTCTACTCTCATGGAAGATCACGTTGGCCGCGATACCATTCACCTTAATGTTC
ATCATTCCTGGACTTGGATTTGGTACAATGATGATGAATGTGGGAATGCAGATGATAGAG
TCATATGGAGTCGCCGGGGGAATAGCAGAACAAGCTATCTCTTCTATAAGAACATTGTAC
TCTTATGTGGCTGAGAACCAAACTCTCGAGAAGTTCAGTCAATCGTTGCAGAAAGTTATG
GAACTAGGAATCAAACAAGGCTTTGCTAGAGGGTTGTTGCTAGGTAGCTTGGGAATGGTT
TATATTAGTTGGGCTTTTCAAGCATGGCTGGGATCGATTCTAGTTAGCAAACATGGAGAA
AAAGGAGGTGATGTATTTGTAGCAGGTTTCAATGTTCTTATGGGAGGATTAAACATTCTG
TCGGCTCTTCCAAATCTTACAGCAATCACGGAGGCAAAATCTGCTGCAATTCGGATCACA
GAGATGATTGATCGACAACCTGCAATTGACACTGAAGACAAGAAGGGGAAAGCATTGTCA
TATGTAAGAGGAGAAATCGAATTCAATGGTGTATACTTCAGTTACCCCTCAAGGCCTGAT
ACGCCTATCTTGCAAGGCCTGAATCTTAGAATTTCACCTGGGAAAACTACAGGACTTGTT
GGGGGTAGTGGTTCAGGGAAGTCCACAATCATTTCATTGCTTCAGAGATTCTACGATCCC
ATTGAAGGCGATATTTCGTTGGATGGTCACAAGATAAAGAAACTCCATATAAAGTGGCTG
AGGTCCCAAATAGGTCTGGTTAATCAAGAACCAATTCTCTTTGCAACAACCATAAAAGAG
AACATACTATTTGGCAAAGAGGGAGCAACTATGGAAGAAGTAGAGAAGGCAACAAAAGCT
GCAAATGCTCATGATTTTATTATAAAGTTACCAGATGCATATGAAACTCAGGTTGGGCAA
TTTGGTCTGCAGTTATCTGGAGGACAAAAGCAGCGAATAGCCATAGCGAGGGCTTTGATA
AGAGATCCAAAAGTCCTGCTGCTCGATGAAGCTACAAGTGCATTGGATTCACAATCTGAA
AGAGTTGTACAACAGGCCCTGGATCATGCATCTATGGGAAGAACTGCAATCGTCATAGCT
CACCGTCTGTCCACCATTAGAATGGCGAATAGGATAGTAGTTCTTCAACAAGGGAGAGTA
ATCGAGTCTGGAACACACGAAGAGCTTATGCAAATGACTGATGGCGAAGGTGGAGAGTAT
TACAAAATGGTGCAGCTGCAGCAACTAGCCACATTAAATGATGTTGCCAATACCCCTAAT
CAAAAGACTGGTGGAAGAAGTAGCTATCGAAAAGGTAGTAATACCCCTCAAAGTCCATTC
AACATGATATCTAGTGCAGCAGCCACACCGGTTATGTACTCGTTCAGTCCAGCATTTTCT
AGAAGTACACCATTGTCAGTTCCTTATTCCGTCCAGTACGAAGAATCATATGACAGTTAT
GATAACCATTCCACAAAAGAGGCTCATCCAGCACCTTCACAATTGCGTTTACTCCAAATG
AATGCTCCTGAATGGGGTAGAGCTTTGCTCGGATGCATAGGAGCGATAGGCTCAGGAGCT
GTTCAGCCAATAAATGCCTACTGCGTGGGGGCAGTTATATCTGTTTACTTCCGGCCTGAT
AAATCCTCCATCCAATCCCACGCGAGGATCTATTCTTTCATATTCATAGGTCTTGCTGTT
TTCAACTTCTTCACGAATGTTATCCAACACTACAATTTTGCTGTCATGGGAGAAAGGCTA
ACCAGAAGGATTAGGGAAATGCTGCTTGCCAAACTCATGACGTTTGAGATCAAATGGTTT
GATCAAGACGAGAACACGAGTGCAGCCATATGTGCTCGGCTATCAACTGAAGCAAACATG
GTTCGTTCCCTTGTGGGAGACCGTATGTCATTGCTAGCTCAAGCATTCTTTGCTGCTACA
TTTGCTTATACATTAGGACTTTTCCTAACATGGAAGCTGTCCTTAGTGATGATGGCAGCT
CAGCCTTTGCTCATTGGAAGTTTTTACGCGAGGACTGTACTGATGAAGAGTATGTCTGTA
AAAGCACAGAAAGCTCAAAGAGAGGGAAGCCAATTAGCAAGTGAAGCTGTTATTAATCAT
AGAACAATAACTGCTTTCTCATCTCAGAAAAGGATAGTAGGGCTCTTTAGAGACTCATTA
GAAGGTCCTAGAAAGGAAAGCATACGACAATCTTGGTATGCCGGTATAGGTCTATGTAGC
TCTCAATTCCTAGCTGCAGCTTCTACAGCTTTAGCTTACTGGTATGGCGGAAAACTATTG
TCACAAGGGGACATATCTCCTGAGAAACTTTTTCAAGCATTTCTAGCATTGCTTTTCACT
GCTTATACTATTGCTGAGGCAGGAAGCATGACTAAAGATATATCTAGAGGAAATAATGCT
GTGGGTTCAGTCTTTGCAATCCTCGATAGAAACACTGAGATCAATCCAGATAATTCATCA
GCAATAGATGCAACGAGAACACAAATAAGGGGACGTGTGGAGCTGAAAAGACTATTTTTT
GCTTATCCATCAAGACCAGATCAGCTGATTTTCAGAGGATTAAGCCTCAAGATAAGTGCA
GGAACTACAGTAGCATTAGTTGGACAAAGTGGTTGTGGAAAATCAACGATAATTGGGCTT
ATTGAAAGATTTTATGATCCAGATAAAGGATCAGTCTATATCGACGAAAGGGATGTAAAA
GACTACAACTTGAGATCCCTGAGGCAAAGTATTGCATTAGTTAGCCAAGAACCAACTCTC
TTTGCAGGAACTATCTATGAGAACATTGCATATGGAAAAGAGAACGCCAGCGAATCTGAG
ATAATAAAGGCTGCTGTGCTTGCTAATGCTCATGAATTTATAAGTGGAATGAATGATGGA
TATGAAACACAATGTGGACAAAGGGGAGTGCAACTATCAGGAGGTCAGAAACAACGAATA
GCCATTGCCCGAGCAATACTCAAGAGCCCGAAAATCCTGTTGTTAGATGAAGCAACTAGT
GCTCTTGACACTGTATCTGAAAGCGCGGTCCAAGAAGCACTAGAGAAAATGATGGTTGGA
CGAACATGCATTGTCGTGGCTCATCGCCTTTCTACAATACAGAAAGCTAGTTCCATTGCT
GTTATAAAGGATGGAATAGTTGCAGAACAAGGCTCACATTCTGATCTACTTTCTATAGGA
AAATATGGTTCATATTATTCTTTGGTCAAGTTACAAGGGGGAAACTCTCCTTACAGGTAA