Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049566
CDS Infomation

pacid=37432468 polypeptide=PGSC0003DMP400033459 locus=PGSC0003DMG402019255 ID=PGSC0003DMT400049566.v4.03 annot-version=v4.03
Sequence

ATGAACAATGCAATTCCAGTGGTTCGCAAAATCAAGAATCAGATCAATGACATTCGTCAA
CAAGGGGCTTTAACTGATTGTCTTGAGCTTCTTGATCTGTCAGTTGATTTAGTATCTGAT
TCAATTGCAGCAATTGATAAAAGAAGTCGTTTGGAGCATGCCAATGCGCAAAGTTGGCTA
AGTGGTGTGCTTACTAACCACGTTACATGCCTTGATTCGTTAAGTACTAAGAATGGAACA
GTTCTTGATGAGTTGATCACTAGAGCTAAGGTAGCATTGGCGATGCTCACATCTGTAACA
ACTCAGAATGAGGATGTTTTCAGGACGGTTTTAGGAAAAATGCCATCTTGGGTGAGTTCG
AGGGATAGGAAGCTGATGGAGAGGTCGGGTAAGGACATCAAAGCAAATGCAGTGGTGGCA
CAAGATGGAACAGGGGATTATCAAACACTTGCTGAAGCAGTTGCTGCAGCACCAGATAGG
AGTAAGACGCGTTATGTAATTTATGTAAAGATGGGAATTTATAAAGAGAATGTTGAGGTG
ACTAGCAGGAAAATGAACTTGATGATTGTTGGTGATGGCATGAATGCTACCATCATTACT
GGTAGCCTTAATTTTGTTGATGGAACAACAACCTTCCGCTCTGCCACTCTTGCTGCAGTT
GGGCAAGGATTTATACTACAGGACATATGTATACAGAACACAGCAGGACCAGAGAAACAC
CAAGCAGTGGCACTTCGAGTTGGAGGTGATATGTCTGTCATAAATCGTTGCCGTATTGAT
GCTTATCAAGACACCCTATATGCACATTCTCAAAGGCAATTCTATCGAGACTCTTACGTG
TCAGGGACTATTGATTTCATATTTGGTAATGCAGCAGTTGTATTCCAGAAATGCCAGCTC
GTAGCTAGAAAACCGAGTAAATATCAGAAAAACATGGTGACTGCACAAGGCAGGACGGAC
CCAAATCAGGCCACGGGGACATCAATTCAATTCTGTGACATAATAGCTAGTCCGGACCTT
GAACCAGTCGTGAATGAATTCAAAACATATCTTGGTAGGCCATGGAAAGAATATTCAAGA
ACTGTAGTGATGCAATCATACTTAGGTGGTCTCATTGATCCAGCGGGTTGGGCTGAGTGG
AACGGAGAATTTGCGTTGAAGACATTGTATTATGGTGAGTATATGAACAATGGACCTGGT
GCTGGTACTAGTAAGCGTGTCAAGTGGCCTGGTTATCATGTCATTACTGACCCCGCTGAA
GCTATGCCGTTCACTGTGGCTGAGCTGATTTGGGGTAGATCATGGTTGAGTTCTACTGGC
GTGGCGTATGTGGATGGATTAAATGATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400033459
PEP Infomation

pacid=37432468 transcript=PGSC0003DMT400049566 locus=PGSC0003DMG402019255 ID=PGSC0003DMT400049566.v4.03 annot-version=v4.03
Sequence

MNNAIPVVRKIKNQINDIRQQGALTDCLELLDLSVDLVSDSIAAIDKRSRLEHANAQSWL
SGVLTNHVTCLDSLSTKNGTVLDELITRAKVALAMLTSVTTQNEDVFRTVLGKMPSWVSS
RDRKLMERSGKDIKANAVVAQDGTGDYQTLAEAVAAAPDRSKTRYVIYVKMGIYKENVEV
TSRKMNLMIVGDGMNATIITGSLNFVDGTTTFRSATLAAVGQGFILQDICIQNTAGPEKH
QAVALRVGGDMSVINRCRIDAYQDTLYAHSQRQFYRDSYVSGTIDFIFGNAAVVFQKCQL
VARKPSKYQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVVNEFKTYLGRPWKEYSR
TVVMQSYLGGLIDPAGWAEWNGEFALKTLYYGEYMNNGPGAGTSKRVKWPGYHVITDPAE
AMPFTVAELIWGRSWLSSTGVAYVDGLND*

Transcript Sequence

Transcript ID

PGSC0003DMT400049566
Transcript Infomation

pacid=37432468 locus=PGSC0003DMG402019255 ID=PGSC0003DMT400049566.v4.03 annot-version=v4.03
Sequence

ATGAACAATGCAATTCCAGTGGTTCGCAAAATCAAGAATCAGATCAATGACATTCGTCAA
CAAGGGGCTTTAACTGATTGTCTTGAGCTTCTTGATCTGTCAGTTGATTTAGTATCTGAT
TCAATTGCAGCAATTGATAAAAGAAGTCGTTTGGAGCATGCCAATGCGCAAAGTTGGCTA
AGTGGTGTGCTTACTAACCACGTTACATGCCTTGATTCGTTAAGTACTAAGAATGGAACA
GTTCTTGATGAGTTGATCACTAGAGCTAAGGTAGCATTGGCGATGCTCACATCTGTAACA
ACTCAGAATGAGGATGTTTTCAGGACGGTTTTAGGAAAAATGCCATCTTGGGTGAGTTCG
AGGGATAGGAAGCTGATGGAGAGGTCGGGTAAGGACATCAAAGCAAATGCAGTGGTGGCA
CAAGATGGAACAGGGGATTATCAAACACTTGCTGAAGCAGTTGCTGCAGCACCAGATAGG
AGTAAGACGCGTTATGTAATTTATGTAAAGATGGGAATTTATAAAGAGAATGTTGAGGTG
ACTAGCAGGAAAATGAACTTGATGATTGTTGGTGATGGCATGAATGCTACCATCATTACT
GGTAGCCTTAATTTTGTTGATGGAACAACAACCTTCCGCTCTGCCACTCTTGCTGCAGTT
GGGCAAGGATTTATACTACAGGACATATGTATACAGAACACAGCAGGACCAGAGAAACAC
CAAGCAGTGGCACTTCGAGTTGGAGGTGATATGTCTGTCATAAATCGTTGCCGTATTGAT
GCTTATCAAGACACCCTATATGCACATTCTCAAAGGCAATTCTATCGAGACTCTTACGTG
TCAGGGACTATTGATTTCATATTTGGTAATGCAGCAGTTGTATTCCAGAAATGCCAGCTC
GTAGCTAGAAAACCGAGTAAATATCAGAAAAACATGGTGACTGCACAAGGCAGGACGGAC
CCAAATCAGGCCACGGGGACATCAATTCAATTCTGTGACATAATAGCTAGTCCGGACCTT
GAACCAGTCGTGAATGAATTCAAAACATATCTTGGTAGGCCATGGAAAGAATATTCAAGA
ACTGTAGTGATGCAATCATACTTAGGTGGTCTCATTGATCCAGCGGGTTGGGCTGAGTGG
AACGGAGAATTTGCGTTGAAGACATTGTATTATGGTGAGTATATGAACAATGGACCTGGT
GCTGGTACTAGTAAGCGTGTCAAGTGGCCTGGTTATCATGTCATTACTGACCCCGCTGAA
GCTATGCCGTTCACTGTGGCTGAGCTGATTTGGGGTAGATCATGGTTGAGTTCTACTGGC
GTGGCGTATGTGGATGGATTAAATGATTAG