Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049548
CDS Infomation

pacid=37433151 polypeptide=PGSC0003DMP400033443 locus=PGSC0003DMG400019246 ID=PGSC0003DMT400049548.v4.03 annot-version=v4.03
Sequence

ATGGCCATCGCCGACCACCACAAGTCACATAACTCCGACGGAAAGCTCTGGAAGCTTTGT
CCTCTCTGGCAATCAGGAACTTCTTCTTCTTCGTCGTCTACACAGAATCTTCACTCTCAG
AATCACAGTCACCAAAACGGCGTCGGATCTAACAGCTCTCGTGCTTCTACGTCAGTTAGC
TCCGTTGCTAGATCACTGCTTCCGGCTCGACGTAGACTTCGGCTCGATCCAGCTAACAGT
CTCTACTTCCCTTATGAACCGGGAAAGCAGGTGAAGAGTGCTGTAAAGATTAAGAACACT
AGCAAATCTTATGTTGCATTTAAGTTTCAAACTACTGCACCAAAGAGCTGCTACATGCGA
CCTCCTGGAGGCATTCTCGAACCCGGTGAAAGTGTTGTTGCCACTGTCTTCAAGTTTGTC
GAGCACCCTGAGAACAACGAAAAGCCTGTTGACCAAAAGAGCAAAGTCAAGTTCAAGATC
ATGAGCTTGAAGGTGAAAGAAGGAGTAGATTACGTACCTGAGTTGTTTGAAGAACAGAAG
GATCAAGTGACTATTGAACGTATCCTACGGGTGGTGTTCTTGGACCCAGAACGACCTTCT
CCAGTACTGGAAAAACTAAAACGTCAGTTGGCTGAAGCCGAGGCAGCATTAGAATCTCGC
AAGAAACCTCCTGTTGAAACTGGACCTAAAGTTGTAGGAGAAGGTCTAGTAATAGATGAA
TGGAAGGAACGAAGGGAGAAGTATCTCGCTCGGCAGCAGGTTGAGGCTGTTGATTCAGTG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400033443
PEP Infomation

pacid=37433151 transcript=PGSC0003DMT400049548 locus=PGSC0003DMG400019246 ID=PGSC0003DMT400049548.v4.03 annot-version=v4.03
Sequence

MAIADHHKSHNSDGKLWKLCPLWQSGTSSSSSSTQNLHSQNHSHQNGVGSNSSRASTSVS
SVARSLLPARRRLRLDPANSLYFPYEPGKQVKSAVKIKNTSKSYVAFKFQTTAPKSCYMR
PPGGILEPGESVVATVFKFVEHPENNEKPVDQKSKVKFKIMSLKVKEGVDYVPELFEEQK
DQVTIERILRVVFLDPERPSPVLEKLKRQLAEAEAALESRKKPPVETGPKVVGEGLVIDE
WKERREKYLARQQVEAVDSV*

Transcript Sequence

Transcript ID

PGSC0003DMT400049548
Transcript Infomation

pacid=37433151 locus=PGSC0003DMG400019246 ID=PGSC0003DMT400049548.v4.03 annot-version=v4.03
Sequence

ATGGCCATCGCCGACCACCACAAGTCACATAACTCCGACGGAAAGCTCTGGAAGCTTTGT
CCTCTCTGGCAATCAGGAACTTCTTCTTCTTCGTCGTCTACACAGAATCTTCACTCTCAG
AATCACAGTCACCAAAACGGCGTCGGATCTAACAGCTCTCGTGCTTCTACGTCAGTTAGC
TCCGTTGCTAGATCACTGCTTCCGGCTCGACGTAGACTTCGGCTCGATCCAGCTAACAGT
CTCTACTTCCCTTATGAACCGGGAAAGCAGGTGAAGAGTGCTGTAAAGATTAAGAACACT
AGCAAATCTTATGTTGCATTTAAGTTTCAAACTACTGCACCAAAGAGCTGCTACATGCGA
CCTCCTGGAGGCATTCTCGAACCCGGTGAAAGTGTTGTTGCCACTGTCTTCAAGTTTGTC
GAGCACCCTGAGAACAACGAAAAGCCTGTTGACCAAAAGAGCAAAGTCAAGTTCAAGATC
ATGAGCTTGAAGGTGAAAGAAGGAGTAGATTACGTACCTGAGTTGTTTGAAGAACAGAAG
GATCAAGTGACTATTGAACGTATCCTACGGGTGGTGTTCTTGGACCCAGAACGACCTTCT
CCAGTACTGGAAAAACTAAAACGTCAGTTGGCTGAAGCCGAGGCAGCATTAGAATCTCGC
AAGAAACCTCCTGTTGAAACTGGACCTAAAGTTGTAGGAGAAGGTCTAGTAATAGATGAA
TGGAAGGAACGAAGGGAGAAGTATCTCGCTCGGCAGCAGGTTGAGGCTGTTGATTCAGTG
TAA