Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049508
CDS Infomation

pacid=37432519 polypeptide=PGSC0003DMP400033421 locus=PGSC0003DMG400019238 ID=PGSC0003DMT400049508.v4.03 annot-version=v4.03
Sequence

ATGAATGCAATACAAAGGAATGATTTTTACTTGTTATTGTTATTGTACTTGTATTCGATC
AACCATACTTTTGGTGCTACAGATAGTACTATAACAGCTACTCAGTTTCTGAAAGATGGC
GATAAAATTGCTTCACATAGTGGAAGCTTTGAAATGGGGTTCTTCAGTCCAGGTGATTCA
GAGAATCGCTATGTGGGTATATGGTACAAGAACATATCTGTTAGGACTGTGGTGTGGGTA
GCTAACAGAGAAGCTCCTTTGACCGGTGAATCAGGTATCTTGAAAGTCATTGAACAAGGA
ATTCTTGTCCTTCTCAATGGTACTAACAATGTTGTGTGGTCAACTAATACCTCTAGATCT
GTGCAGAATCCTGTTGCACAGTTGCTGGATTCGGGGAATCTTGTTTTAAAACAAGCTGAT
GATGATAACTCGGGAAATTTCCTCTGGCAGAGTTTTGATCACCCAAGTGATACACTATTA
CCAAGCATGAAGCTCGGTTGGAACTTTGTAACTGGCCGAGAGGTGTACTTGTCATCATGG
AAGAACGAGGAGGATCCAGCTCCCGGTGATTATACATATCATTGTGATCCTTCTGGATAT
CCACAGAACATCCTGAAGAAGGGTTCAGATGTTGTGTATCGGTCTGGACCGTGGAATGGT
CTTCATTTTAGTGGTGCATTAAGCTCAAGAGACAGTCCTTTGTATACATTTGGGATATTC
TCAAGTAAGACGGAGGTGTATTTTGGATTTTATCTCACATCTTCGGTTATCACAAGGTTG
ACACTAAGTCAGAATGGTGCATTACAGCGTTGGACTTGGGGTGACCGTGCACAGGATTGG
ATCCCTTACCTCTCAATACCCACAGACAACTGCGATGTTTACAAACTGTGTGGCGCATAT
GGTAGCTGCAACAGTCAAAATTCTCCTGTATGTGGATGCTTAGACAAATTTGTGCCAAAA
CATAATGAAGATTGGCAAAAGGCAGACTGGTCAACTGGCTGTGTTAGGAGGACTGAACTA
AACTGCCTCCAGGGAGATGTATTTTTGAAGTATTCGCATATTAAATTGCCAGACACACGG
AATTCCTGGTCCAATGTGACTATGACACTAGAAGAATGCAAGACTATATGCTCTAGAAAT
TGCTCATGTATGGCTTACTCAAATATTGACATACGCAATGGAGGAAGTGGATGCTTATTG
TGGTTCAAGGATCTGCTTGACATTCGACAGCTATCTAAAGAGGGACAAGATATCTATATA
AGAATAGCTGCCTCTGAATTAGATAGTCTGGAGAAATCAGATGGTGAAAAAGGAAGAGCA
CTATGCTGGATTCTTCCATTATCCGTTGGTTTAGTTCTAGTAATCCTTAGCATATTGCTG
ATATGCCACAGAAGAAGGAAGAAGGCTTTAAAGCTTACAACGAAAGAAAAATCGAGATAC
AGCGGAAGTATCAAGCAGGATTACAACAGTGGTAGTTGCACTGAAGAATTTGAGATACCA
CTGTTTGACTTATCTACCATAACTAAGGCTACCGATAACTTTTCAGTAAACAGAAAGATT
GGAGAGGGGGGCTTTGGTCCTGTTTATAAGGGAATACTTGAAAAAGGACGAGAAATAGCT
GTCAAGCGGCTGTCTAAAACATCCACGCAAGGAGAAGATGAGTTCAAGAACGAAGTGGTA
TATATTGCCAAACTTCAGCATAGAAATCTTGTGAAGATTCTTGGATGTTGCATTGAAGGA
GAAGAAAAAATGCTGATATATGAATACTTGTCAAACGGAAGTCTTGATTCATTTATATTT
GGTGGCAGACAAAGCAGGATATTAGACTGGTCTGAGCGATTTCACATCATCAATGGGATT
GCTCGGGGACTTGTGTATCTGCATCAAGATTCTCAACTGCGGATAATTCATAGAGACCTG
AAAGCTAATAACATCTTGCTAGACAATGATATGAATGCAAAGATATCAGACTTTGGTATA
GCAAGATGCCATGAAGAGGATGGTAATGAAGCCATGACAAACCGAGTTATTGGAACATAC
GGATACCTCTCACCAGAATATGCGCTATATGGGCAATACTCTGTAAAATCAGATGTGTAT
AGCTTTGGTATCTTAGTACTGGAAATTGTGAGTGGAAAAAGCAACAGACGATTCGCTCCT
TCAAACCTTAACCGTAGTCTAATCGGGCATGCATGGGAACTCAACAAGGAAGGTAGGTCA
ATAGAACTACTTGATGAACGCGTAGGTGATTCTTGTTCTACACCTCAAGAAGTGGTACGA
TCAATTGGTGTTGGTCTATTATGTGTCCAAGAACGTCCAGATGATCGTCCAAGTATGTCT
TCCGTAGTTCTAATGTTAAACAATGAAGGTACGCTGCCTCAGGCTAAACTACTAGCTTTT
TACATGGAAGGAGATGCATCAGATACTGAATTACTTTCTACCCAATCACATATTACAACG
GATGACACCCCGTTAGAAATTAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400033421
PEP Infomation

pacid=37432519 transcript=PGSC0003DMT400049508 locus=PGSC0003DMG400019238 ID=PGSC0003DMT400049508.v4.03 annot-version=v4.03
Sequence

MNAIQRNDFYLLLLLYLYSINHTFGATDSTITATQFLKDGDKIASHSGSFEMGFFSPGDS
ENRYVGIWYKNISVRTVVWVANREAPLTGESGILKVIEQGILVLLNGTNNVVWSTNTSRS
VQNPVAQLLDSGNLVLKQADDDNSGNFLWQSFDHPSDTLLPSMKLGWNFVTGREVYLSSW
KNEEDPAPGDYTYHCDPSGYPQNILKKGSDVVYRSGPWNGLHFSGALSSRDSPLYTFGIF
SSKTEVYFGFYLTSSVITRLTLSQNGALQRWTWGDRAQDWIPYLSIPTDNCDVYKLCGAY
GSCNSQNSPVCGCLDKFVPKHNEDWQKADWSTGCVRRTELNCLQGDVFLKYSHIKLPDTR
NSWSNVTMTLEECKTICSRNCSCMAYSNIDIRNGGSGCLLWFKDLLDIRQLSKEGQDIYI
RIAASELDSLEKSDGEKGRALCWILPLSVGLVLVILSILLICHRRRKKALKLTTKEKSRY
SGSIKQDYNSGSCTEEFEIPLFDLSTITKATDNFSVNRKIGEGGFGPVYKGILEKGREIA
VKRLSKTSTQGEDEFKNEVVYIAKLQHRNLVKILGCCIEGEEKMLIYEYLSNGSLDSFIF
GGRQSRILDWSERFHIINGIARGLVYLHQDSQLRIIHRDLKANNILLDNDMNAKISDFGI
ARCHEEDGNEAMTNRVIGTYGYLSPEYALYGQYSVKSDVYSFGILVLEIVSGKSNRRFAP
SNLNRSLIGHAWELNKEGRSIELLDERVGDSCSTPQEVVRSIGVGLLCVQERPDDRPSMS
SVVLMLNNEGTLPQAKLLAFYMEGDASDTELLSTQSHITTDDTPLEIR*

Transcript Sequence

Transcript ID

PGSC0003DMT400049508
Transcript Infomation

pacid=37432519 locus=PGSC0003DMG400019238 ID=PGSC0003DMT400049508.v4.03 annot-version=v4.03
Sequence

ATGAATGCAATACAAAGGAATGATTTTTACTTGTTATTGTTATTGTACTTGTATTCGATC
AACCATACTTTTGGTGCTACAGATAGTACTATAACAGCTACTCAGTTTCTGAAAGATGGC
GATAAAATTGCTTCACATAGTGGAAGCTTTGAAATGGGGTTCTTCAGTCCAGGTGATTCA
GAGAATCGCTATGTGGGTATATGGTACAAGAACATATCTGTTAGGACTGTGGTGTGGGTA
GCTAACAGAGAAGCTCCTTTGACCGGTGAATCAGGTATCTTGAAAGTCATTGAACAAGGA
ATTCTTGTCCTTCTCAATGGTACTAACAATGTTGTGTGGTCAACTAATACCTCTAGATCT
GTGCAGAATCCTGTTGCACAGTTGCTGGATTCGGGGAATCTTGTTTTAAAACAAGCTGAT
GATGATAACTCGGGAAATTTCCTCTGGCAGAGTTTTGATCACCCAAGTGATACACTATTA
CCAAGCATGAAGCTCGGTTGGAACTTTGTAACTGGCCGAGAGGTGTACTTGTCATCATGG
AAGAACGAGGAGGATCCAGCTCCCGGTGATTATACATATCATTGTGATCCTTCTGGATAT
CCACAGAACATCCTGAAGAAGGGTTCAGATGTTGTGTATCGGTCTGGACCGTGGAATGGT
CTTCATTTTAGTGGTGCATTAAGCTCAAGAGACAGTCCTTTGTATACATTTGGGATATTC
TCAAGTAAGACGGAGGTGTATTTTGGATTTTATCTCACATCTTCGGTTATCACAAGGTTG
ACACTAAGTCAGAATGGTGCATTACAGCGTTGGACTTGGGGTGACCGTGCACAGGATTGG
ATCCCTTACCTCTCAATACCCACAGACAACTGCGATGTTTACAAACTGTGTGGCGCATAT
GGTAGCTGCAACAGTCAAAATTCTCCTGTATGTGGATGCTTAGACAAATTTGTGCCAAAA
CATAATGAAGATTGGCAAAAGGCAGACTGGTCAACTGGCTGTGTTAGGAGGACTGAACTA
AACTGCCTCCAGGGAGATGTATTTTTGAAGTATTCGCATATTAAATTGCCAGACACACGG
AATTCCTGGTCCAATGTGACTATGACACTAGAAGAATGCAAGACTATATGCTCTAGAAAT
TGCTCATGTATGGCTTACTCAAATATTGACATACGCAATGGAGGAAGTGGATGCTTATTG
TGGTTCAAGGATCTGCTTGACATTCGACAGCTATCTAAAGAGGGACAAGATATCTATATA
AGAATAGCTGCCTCTGAATTAGATAGTCTGGAGAAATCAGATGGTGAAAAAGGAAGAGCA
CTATGCTGGATTCTTCCATTATCCGTTGGTTTAGTTCTAGTAATCCTTAGCATATTGCTG
ATATGCCACAGAAGAAGGAAGAAGGCTTTAAAGCTTACAACGAAAGAAAAATCGAGATAC
AGCGGAAGTATCAAGCAGGATTACAACAGTGGTAGTTGCACTGAAGAATTTGAGATACCA
CTGTTTGACTTATCTACCATAACTAAGGCTACCGATAACTTTTCAGTAAACAGAAAGATT
GGAGAGGGGGGCTTTGGTCCTGTTTATAAGGGAATACTTGAAAAAGGACGAGAAATAGCT
GTCAAGCGGCTGTCTAAAACATCCACGCAAGGAGAAGATGAGTTCAAGAACGAAGTGGTA
TATATTGCCAAACTTCAGCATAGAAATCTTGTGAAGATTCTTGGATGTTGCATTGAAGGA
GAAGAAAAAATGCTGATATATGAATACTTGTCAAACGGAAGTCTTGATTCATTTATATTT
GGTGGCAGACAAAGCAGGATATTAGACTGGTCTGAGCGATTTCACATCATCAATGGGATT
GCTCGGGGACTTGTGTATCTGCATCAAGATTCTCAACTGCGGATAATTCATAGAGACCTG
AAAGCTAATAACATCTTGCTAGACAATGATATGAATGCAAAGATATCAGACTTTGGTATA
GCAAGATGCCATGAAGAGGATGGTAATGAAGCCATGACAAACCGAGTTATTGGAACATAC
GGATACCTCTCACCAGAATATGCGCTATATGGGCAATACTCTGTAAAATCAGATGTGTAT
AGCTTTGGTATCTTAGTACTGGAAATTGTGAGTGGAAAAAGCAACAGACGATTCGCTCCT
TCAAACCTTAACCGTAGTCTAATCGGGCATGCATGGGAACTCAACAAGGAAGGTAGGTCA
ATAGAACTACTTGATGAACGCGTAGGTGATTCTTGTTCTACACCTCAAGAAGTGGTACGA
TCAATTGGTGTTGGTCTATTATGTGTCCAAGAACGTCCAGATGATCGTCCAAGTATGTCT
TCCGTAGTTCTAATGTTAAACAATGAAGGTACGCTGCCTCAGGCTAAACTACTAGCTTTT
TACATGGAAGGAGATGCATCAGATACTGAATTACTTTCTACCCAATCACATATTACAACG
GATGACACCCCGTTAGAAATTAGATGA