Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049493
CDS Infomation

pacid=37432430 polypeptide=PGSC0003DMP400033411 locus=PGSC0003DMG400019232 ID=PGSC0003DMT400049493.v4.03 annot-version=v4.03
Sequence

ATGGAATCACACCATCTGTATGGATATGGTGGGACTGATGTGAATTTGCCATATTCTTAC
GCTATGACTACTACTCCTTCGATACCTAATAGGCTGTTGGGAACATTGAAATTTGATTCG
GGAAATTCTCCAAATTCTCCATTTGCAAACTATAATGATCCTGGTACCCCTACCACATTA
AGTGATAGCCTGGAGCAACACAGCTCTACTGAAAATATTTCAGGGACTAGTCCTTGCAGT
AATTCCTCGCGGGATTATAATCTTTATTTCTGCAGGCCTAGCCCCTCAGCAGATATCCGC
CATAACAGTCTTCTGGTTTATTCTGGTGATAATTCTTTACTCCAGTATGCAAATCACGGT
CACAACATGAAACGTGCACTGCTTCAATTGGAGACCGCTTTAATGGGGCCAGAAGAAGTC
ACAACATACAGCCCTTCTGCAGGGGAAATTCAGCAGCCACAAGCATCAGGTCAGAGGTCC
GGGATGTGGCACCAAGATGGCCAGGTTTCGTATCGAATTGAAACACAGCCATCACATGTT
TCTGTCTTTGGCATATCAGGCAATATAATTCAAAGTGAGAAGCATCACAAACCAATGGTG
GATTATCCGTCACAGGGGATTCCTTTTGGCAACCTAAAGCAGCTGCTTATCGCGTGTGCC
AGAGCTCTTGCTGAGAACAACTTGGATGATTTTGAAAAATTGATTGCCAAGGCAAGAAGT
GCTGTGTCCATTACTGGTGATCCAATCCAGCGTCTCGGTGCTTACATCGTAGAAGGGCTA
GTAGCAAGAAAAGAAGCATCCGGAACCAACATTTACAGGGCTCTCAGGTGTAAGGAACCA
GCTGGCAGGGACTTGCTTTCCTACATGCATATCTTATATGAGATATGCCCTTATCTAAAG
TTCGGTTACATGGCTGCGAATGGTGCAATAGCAGATGCGTGTAGAAATGAAAATCGCATT
CACATTATAGACTTCCAGATTGCACAAGGGACTCAATGGATGACTCTTCTTCAAGCTCTT
GCTGCCAGGCCTAGCGGTGCACCTTATGTACGTATTACAGGTATTGATGATCCAGTTTCA
AAATATGCCCGGGGAGATGGATTGACGTTAGTGGGAAAAAAGCTGGCAGCCATTTCTGAG
AAATTCAACATTCCGGTTGAGTTTCATGCAGTGCCAGTTTTTGCTCCTGATGTCACCAGG
GATATGCTTGATGTGAGGCCTGGTGAGGCTCTGGCAGTAAACTTCCCTTTGTCACTTCAC
CACACACCCGATGAGAGCGTTGATGTTACTAATCCAAGGGATGAGCTTCTAAGGATGGTG
AAATCGTTTTCTCCCAAGGTAGTCACTTTGGTGGAACAAGAATCAAACACAAACACTGCC
CCCTTTTTCCCTCGATTTCAAGAAGCTCTAGACTACTATTCTGCAATGTTCGAGTCCATA
GATGTAACGTTAGAAAGGGACAAGAAGGAGAGGATCAACGTGGAGCAGCATTGTTTGGCA
AGGGATATAGTTAACGTCATAGCATGCGAAGGCAAGGAAAGAGCGGAACGCCACGAGCTA
TTAGGGAAATGGAAATTGAGGTTCGCAATGGCAGGGTTTCACCAGTATCCTCTGAGCTCT
TACGTAAATTCGGTGATAAAGAGCCTCATGAGGTGCTACTCAGAGAATTATACACTGGTG
GAAGAAGATGGAGCTATGTTGTTGGGATGGAAAAAGAGGTACCTAATCTCTGCATCAGCT
TGGCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400033411
PEP Infomation

pacid=37432430 transcript=PGSC0003DMT400049493 locus=PGSC0003DMG400019232 ID=PGSC0003DMT400049493.v4.03 annot-version=v4.03
Sequence

MESHHLYGYGGTDVNLPYSYAMTTTPSIPNRLLGTLKFDSGNSPNSPFANYNDPGTPTTL
SDSLEQHSSTENISGTSPCSNSSRDYNLYFCRPSPSADIRHNSLLVYSGDNSLLQYANHG
HNMKRALLQLETALMGPEEVTTYSPSAGEIQQPQASGQRSGMWHQDGQVSYRIETQPSHV
SVFGISGNIIQSEKHHKPMVDYPSQGIPFGNLKQLLIACARALAENNLDDFEKLIAKARS
AVSITGDPIQRLGAYIVEGLVARKEASGTNIYRALRCKEPAGRDLLSYMHILYEICPYLK
FGYMAANGAIADACRNENRIHIIDFQIAQGTQWMTLLQALAARPSGAPYVRITGIDDPVS
KYARGDGLTLVGKKLAAISEKFNIPVEFHAVPVFAPDVTRDMLDVRPGEALAVNFPLSLH
HTPDESVDVTNPRDELLRMVKSFSPKVVTLVEQESNTNTAPFFPRFQEALDYYSAMFESI
DVTLERDKKERINVEQHCLARDIVNVIACEGKERAERHELLGKWKLRFAMAGFHQYPLSS
YVNSVIKSLMRCYSENYTLVEEDGAMLLGWKKRYLISASAWH*

Transcript Sequence

Transcript ID

PGSC0003DMT400049493
Transcript Infomation

pacid=37432430 locus=PGSC0003DMG400019232 ID=PGSC0003DMT400049493.v4.03 annot-version=v4.03
Sequence

ATGGAATCACACCATCTGTATGGATATGGTGGGACTGATGTGAATTTGCCATATTCTTAC
GCTATGACTACTACTCCTTCGATACCTAATAGGCTGTTGGGAACATTGAAATTTGATTCG
GGAAATTCTCCAAATTCTCCATTTGCAAACTATAATGATCCTGGTACCCCTACCACATTA
AGTGATAGCCTGGAGCAACACAGCTCTACTGAAAATATTTCAGGGACTAGTCCTTGCAGT
AATTCCTCGCGGGATTATAATCTTTATTTCTGCAGGCCTAGCCCCTCAGCAGATATCCGC
CATAACAGTCTTCTGGTTTATTCTGGTGATAATTCTTTACTCCAGTATGCAAATCACGGT
CACAACATGAAACGTGCACTGCTTCAATTGGAGACCGCTTTAATGGGGCCAGAAGAAGTC
ACAACATACAGCCCTTCTGCAGGGGAAATTCAGCAGCCACAAGCATCAGGTCAGAGGTCC
GGGATGTGGCACCAAGATGGCCAGGTTTCGTATCGAATTGAAACACAGCCATCACATGTT
TCTGTCTTTGGCATATCAGGCAATATAATTCAAAGTGAGAAGCATCACAAACCAATGGTG
GATTATCCGTCACAGGGGATTCCTTTTGGCAACCTAAAGCAGCTGCTTATCGCGTGTGCC
AGAGCTCTTGCTGAGAACAACTTGGATGATTTTGAAAAATTGATTGCCAAGGCAAGAAGT
GCTGTGTCCATTACTGGTGATCCAATCCAGCGTCTCGGTGCTTACATCGTAGAAGGGCTA
GTAGCAAGAAAAGAAGCATCCGGAACCAACATTTACAGGGCTCTCAGGTGTAAGGAACCA
GCTGGCAGGGACTTGCTTTCCTACATGCATATCTTATATGAGATATGCCCTTATCTAAAG
TTCGGTTACATGGCTGCGAATGGTGCAATAGCAGATGCGTGTAGAAATGAAAATCGCATT
CACATTATAGACTTCCAGATTGCACAAGGGACTCAATGGATGACTCTTCTTCAAGCTCTT
GCTGCCAGGCCTAGCGGTGCACCTTATGTACGTATTACAGGTATTGATGATCCAGTTTCA
AAATATGCCCGGGGAGATGGATTGACGTTAGTGGGAAAAAAGCTGGCAGCCATTTCTGAG
AAATTCAACATTCCGGTTGAGTTTCATGCAGTGCCAGTTTTTGCTCCTGATGTCACCAGG
GATATGCTTGATGTGAGGCCTGGTGAGGCTCTGGCAGTAAACTTCCCTTTGTCACTTCAC
CACACACCCGATGAGAGCGTTGATGTTACTAATCCAAGGGATGAGCTTCTAAGGATGGTG
AAATCGTTTTCTCCCAAGGTAGTCACTTTGGTGGAACAAGAATCAAACACAAACACTGCC
CCCTTTTTCCCTCGATTTCAAGAAGCTCTAGACTACTATTCTGCAATGTTCGAGTCCATA
GATGTAACGTTAGAAAGGGACAAGAAGGAGAGGATCAACGTGGAGCAGCATTGTTTGGCA
AGGGATATAGTTAACGTCATAGCATGCGAAGGCAAGGAAAGAGCGGAACGCCACGAGCTA
TTAGGGAAATGGAAATTGAGGTTCGCAATGGCAGGGTTTCACCAGTATCCTCTGAGCTCT
TACGTAAATTCGGTGATAAAGAGCCTCATGAGGTGCTACTCAGAGAATTATACACTGGTG
GAAGAAGATGGAGCTATGTTGTTGGGATGGAAAAAGAGGTACCTAATCTCTGCATCAGCT
TGGCACTGA