Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049453
CDS Infomation

pacid=37478894 polypeptide=PGSC0003DMP400033384 locus=PGSC0003DMG400019214 ID=PGSC0003DMT400049453.v4.03 annot-version=v4.03
Sequence

ATGTCGTTAACACCGGATATAAATCGGAAAGTGGGAGTGGGAGTAGCTCCATCTCCGTCG
CCGTTTTTTACACCTAGACCGGAACGGAGGAGAGGCCCGGATCCTAGGGGGATTGATTAC
GGATCCAATCGTCTGGATAAAGATAAAGAGGTCAATGTCCAAGTTCTGGTTAGATGCAGG
CCGTTGAATGATGATGAGCAAAGGGTAAATGTTCCGAAGGCCATAACATGTAATGAAAGC
AAAAGAGAAATTTCTATTGTACAAAATGTAGCTAATAAGCAAGTAGACAAAGTCTTCACG
TTTGACAAGGTTTTTGGCCCAAAAGCACAGCAAAGATCAATATATGATCAAGCCATTTCG
CCCATTGTTAAGGAAGTTCTTGATGGATTTAATTGCACTGTATTTGCATACGGGCAGACT
GGTACAGGAAAAACATATACAATGGAAGGAGGGATGAGGAATAAGGCTGGTGAATTACCA
GCTGAAGCAGGTATAATTCCAAGGGCAGTTCGACAAATTTTTGATACACTTGAAGCGCAA
CATGCAGACTATAGCATGAAAGTGACCTTTTGGGAACTATACAATGAGGAAATCATTGAC
TTGCTAGCTTCAGAAGAGCCCTCAAAGTTTTCAGAAGAGAGACAAAGGAAGCCCATATCC
CTCATGGAGGATGGAAAAGGTTTAGTTGTAGTGAGGGGCCTTGAGGAAGAAGCTGTGTAC
AGTGCAAATGACATTTATAACCTCCTGGAACGAGGAGCAGCTAGGAGGCGCACAGCAGAC
ACTCTATTAAACAAGCGAAGCAGTCGCTCTCACTCTGTATTTAGCATAACTATTCATGTC
AAAGAAATGACTGTTGGAGATGAGGAGCTCATTAAGTGTGGCAAGCTCAACCTTGTTGAT
TTAGCAGGATCAGAAAATATTTCTCGATCAGGCGCCCGAGAGGGCCGTGCAAGAGAAGCC
GGAGAAATCAACAAGAGTTTGCTTACTCTTGGTCGTGTCATAACAGCTTTGGTTGAGCAC
TCCATTCATGTACCTTACAGGGATAGTAAGCTCACAAGACTACTACGAGATTCACTAGGA
GGAAAAACAAAAACTTGTATCATTGCAACAATTTCGCTCTCTGCCCACTGTCTCGAAGAA
ACTTTAAGCACTCTAGATTATGCACACCGTGCTAAAAACATCAAAAACAAACCGGAGGCT
AACCAGAGAATGTCCAAGGCAGTGCTGCTCAAAGATCTATATTTGGAACTAGAAAGGATG
AAACAAGATGTCCGAGCTGCAAGAGAAAAGAATGGAGTTTATGTTCCACATGAAAGATTT
TTGCAGGATGAAGCGGAAAAGAAGGCAAAGAATGAGAAAATAGAGCAGCTGGAGATTGAT
CTAAACATTAGTGAAAAGCAAGTTGATAAATTCCGTGAGCTTTATCTTAGTGAGCAAGAA
GAAAAATTGAACCTCAAAGCTGAACTCAAAGAATGCCAGGCGAATCTGGAAAATAGTAAA
AAGGCATTACATGAGCTTCAAGAGAATTACAGGATTGCTATTTCAACACTGAAGGAAAAG
GAGTTAATTATTTCTAAACAAATACATTCAGAAAATTGTCTGATCGATTGTGCAAAGGAC
TTGCAGAAAAATTTGCAGAATGCATCAGAAGATATAACTTCACTTTTTGCAAGAATAGAT
CACAAAGACAAGCTGGAGGCAGATAATCAAAATCTGCTACGTACATTTGGTTCACGGCTT
GATGATAGTTTAAATGACCTGCATAAGGTTATTCACGGGTTGATATCCCAGCAACAGCAG
CAGTTAAGAGGCATGGAGGAGCATGTCAGCTCATTTCTTGCCAGCAAATGTGATGTTACT
AAGGTCATGGAATCAAAGATCAATAAAATGACTCAGACATACACTTCTGGCATGACAAGC
TTGAAGGAACTTGTTGATGTGTTGCAGTTGGAAGCTTCTTCTGATTTGGACCAGATCAAG
TCTAAAATATCATCTCAAGCTACCACAGTTGAGAAGTTCCTTACAGCTGCATCTTTGGAG
GCAAAAGATTTTGTTTGTGATATTAAGAATTCTCTGGACGAACAAAGACAAATACTAGAT
TGGTCTGCTAAACAACAAGAAGAGGGTCTTCGTCGAAGTCTTGTTTCAGCAGAATTAATT
TCTCAGGCAACTGTAAACTTCTTTGATGATCTCCATCAACGTGCTTCTGAAGTGATGAGA
CTTCTAGATAAGAGCAATATTAGTACAGCTGACCAACTACAAAAGTTTGAGAAGGAATTC
AAGGAAGAGTCACTTAAAGAAGAAAATTCAGCTCTTGAGAAAATTGCTGCAATACTGGCA
ACTCTAACAACTAAGAAAGCAGCTATGGTGTCAGAGGCGTCAAGAAACTTCCAGGATTCT
AGTGCAAAAGAAAATAAGCAGCTGTTCGAAGAAATATCAGGTGTCCAGCAGGTTTCAGCT
AGTGCAAAGCAAAAATTGAATGGATACATTAATGAGGTGAAACAAAATTTCTTGGAAGAC
ACGTTCATGTATGCAGAAAATAGTCTGACTTTGGAAAATTGCCTTCAAGAGTGCACAAAC
AAGGTGGATAACTTGAATGAACAATTGGGAGAAACTCAATTAGGAGTCCATCAAATTCTT
ACAAACAATCTTGCAGATATAGAACATATTTCACGGGAAAGCTCCACCAGAATTGGCTGT
GCATATGACAAATTTCTCTCTACTTCCTCATGTGTGGATGGGAAAGTTGAAGCCCATAGT
CGTGATTTGCAGACTTCTTTCAATGATTCTTTGACATTGGACATGGAACACAAGAAAAGA
ATCGAGTCAACGAGTAACATCTGTCTGAATCAGCTGAGCTCTACTCAACAGAACCATGGT
GAATGTATATCAGATATACAATGTACAGCAGAACAATGCCTCCAAAAAGATTACATGGTT
GATATGTGCACTGATAAGACACCAATGAAGCGACCGATACAAATTCCGAGCCTTTCATCC
ATTGAAGATATGAGAACAGTGATATCTAAAGTTAGTCCGGAGAATGAATCGAAGTGGAGT
AGTGCTGAGGGCAAGAATCAGAGGCAATTACAACAATGTAATGGAGTATCTCCCAATAGA
ACTCCATTTGCAGATGTCAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400033384
PEP Infomation

pacid=37478894 transcript=PGSC0003DMT400049453 locus=PGSC0003DMG400019214 ID=PGSC0003DMT400049453.v4.03 annot-version=v4.03
Sequence

MSLTPDINRKVGVGVAPSPSPFFTPRPERRRGPDPRGIDYGSNRLDKDKEVNVQVLVRCR
PLNDDEQRVNVPKAITCNESKREISIVQNVANKQVDKVFTFDKVFGPKAQQRSIYDQAIS
PIVKEVLDGFNCTVFAYGQTGTGKTYTMEGGMRNKAGELPAEAGIIPRAVRQIFDTLEAQ
HADYSMKVTFWELYNEEIIDLLASEEPSKFSEERQRKPISLMEDGKGLVVVRGLEEEAVY
SANDIYNLLERGAARRRTADTLLNKRSSRSHSVFSITIHVKEMTVGDEELIKCGKLNLVD
LAGSENISRSGAREGRAREAGEINKSLLTLGRVITALVEHSIHVPYRDSKLTRLLRDSLG
GKTKTCIIATISLSAHCLEETLSTLDYAHRAKNIKNKPEANQRMSKAVLLKDLYLELERM
KQDVRAAREKNGVYVPHERFLQDEAEKKAKNEKIEQLEIDLNISEKQVDKFRELYLSEQE
EKLNLKAELKECQANLENSKKALHELQENYRIAISTLKEKELIISKQIHSENCLIDCAKD
LQKNLQNASEDITSLFARIDHKDKLEADNQNLLRTFGSRLDDSLNDLHKVIHGLISQQQQ
QLRGMEEHVSSFLASKCDVTKVMESKINKMTQTYTSGMTSLKELVDVLQLEASSDLDQIK
SKISSQATTVEKFLTAASLEAKDFVCDIKNSLDEQRQILDWSAKQQEEGLRRSLVSAELI
SQATVNFFDDLHQRASEVMRLLDKSNISTADQLQKFEKEFKEESLKEENSALEKIAAILA
TLTTKKAAMVSEASRNFQDSSAKENKQLFEEISGVQQVSASAKQKLNGYINEVKQNFLED
TFMYAENSLTLENCLQECTNKVDNLNEQLGETQLGVHQILTNNLADIEHISRESSTRIGC
AYDKFLSTSSCVDGKVEAHSRDLQTSFNDSLTLDMEHKKRIESTSNICLNQLSSTQQNHG
ECISDIQCTAEQCLQKDYMVDMCTDKTPMKRPIQIPSLSSIEDMRTVISKVSPENESKWS
SAEGKNQRQLQQCNGVSPNRTPFADVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400049453
Transcript Infomation

pacid=37478894 locus=PGSC0003DMG400019214 ID=PGSC0003DMT400049453.v4.03 annot-version=v4.03
Sequence

ATGTCGTTAACACCGGATATAAATCGGAAAGTGGGAGTGGGAGTAGCTCCATCTCCGTCG
CCGTTTTTTACACCTAGACCGGAACGGAGGAGAGGCCCGGATCCTAGGGGGATTGATTAC
GGATCCAATCGTCTGGATAAAGATAAAGAGGTCAATGTCCAAGTTCTGGTTAGATGCAGG
CCGTTGAATGATGATGAGCAAAGGGTAAATGTTCCGAAGGCCATAACATGTAATGAAAGC
AAAAGAGAAATTTCTATTGTACAAAATGTAGCTAATAAGCAAGTAGACAAAGTCTTCACG
TTTGACAAGGTTTTTGGCCCAAAAGCACAGCAAAGATCAATATATGATCAAGCCATTTCG
CCCATTGTTAAGGAAGTTCTTGATGGATTTAATTGCACTGTATTTGCATACGGGCAGACT
GGTACAGGAAAAACATATACAATGGAAGGAGGGATGAGGAATAAGGCTGGTGAATTACCA
GCTGAAGCAGGTATAATTCCAAGGGCAGTTCGACAAATTTTTGATACACTTGAAGCGCAA
CATGCAGACTATAGCATGAAAGTGACCTTTTGGGAACTATACAATGAGGAAATCATTGAC
TTGCTAGCTTCAGAAGAGCCCTCAAAGTTTTCAGAAGAGAGACAAAGGAAGCCCATATCC
CTCATGGAGGATGGAAAAGGTTTAGTTGTAGTGAGGGGCCTTGAGGAAGAAGCTGTGTAC
AGTGCAAATGACATTTATAACCTCCTGGAACGAGGAGCAGCTAGGAGGCGCACAGCAGAC
ACTCTATTAAACAAGCGAAGCAGTCGCTCTCACTCTGTATTTAGCATAACTATTCATGTC
AAAGAAATGACTGTTGGAGATGAGGAGCTCATTAAGTGTGGCAAGCTCAACCTTGTTGAT
TTAGCAGGATCAGAAAATATTTCTCGATCAGGCGCCCGAGAGGGCCGTGCAAGAGAAGCC
GGAGAAATCAACAAGAGTTTGCTTACTCTTGGTCGTGTCATAACAGCTTTGGTTGAGCAC
TCCATTCATGTACCTTACAGGGATAGTAAGCTCACAAGACTACTACGAGATTCACTAGGA
GGAAAAACAAAAACTTGTATCATTGCAACAATTTCGCTCTCTGCCCACTGTCTCGAAGAA
ACTTTAAGCACTCTAGATTATGCACACCGTGCTAAAAACATCAAAAACAAACCGGAGGCT
AACCAGAGAATGTCCAAGGCAGTGCTGCTCAAAGATCTATATTTGGAACTAGAAAGGATG
AAACAAGATGTCCGAGCTGCAAGAGAAAAGAATGGAGTTTATGTTCCACATGAAAGATTT
TTGCAGGATGAAGCGGAAAAGAAGGCAAAGAATGAGAAAATAGAGCAGCTGGAGATTGAT
CTAAACATTAGTGAAAAGCAAGTTGATAAATTCCGTGAGCTTTATCTTAGTGAGCAAGAA
GAAAAATTGAACCTCAAAGCTGAACTCAAAGAATGCCAGGCGAATCTGGAAAATAGTAAA
AAGGCATTACATGAGCTTCAAGAGAATTACAGGATTGCTATTTCAACACTGAAGGAAAAG
GAGTTAATTATTTCTAAACAAATACATTCAGAAAATTGTCTGATCGATTGTGCAAAGGAC
TTGCAGAAAAATTTGCAGAATGCATCAGAAGATATAACTTCACTTTTTGCAAGAATAGAT
CACAAAGACAAGCTGGAGGCAGATAATCAAAATCTGCTACGTACATTTGGTTCACGGCTT
GATGATAGTTTAAATGACCTGCATAAGGTTATTCACGGGTTGATATCCCAGCAACAGCAG
CAGTTAAGAGGCATGGAGGAGCATGTCAGCTCATTTCTTGCCAGCAAATGTGATGTTACT
AAGGTCATGGAATCAAAGATCAATAAAATGACTCAGACATACACTTCTGGCATGACAAGC
TTGAAGGAACTTGTTGATGTGTTGCAGTTGGAAGCTTCTTCTGATTTGGACCAGATCAAG
TCTAAAATATCATCTCAAGCTACCACAGTTGAGAAGTTCCTTACAGCTGCATCTTTGGAG
GCAAAAGATTTTGTTTGTGATATTAAGAATTCTCTGGACGAACAAAGACAAATACTAGAT
TGGTCTGCTAAACAACAAGAAGAGGGTCTTCGTCGAAGTCTTGTTTCAGCAGAATTAATT
TCTCAGGCAACTGTAAACTTCTTTGATGATCTCCATCAACGTGCTTCTGAAGTGATGAGA
CTTCTAGATAAGAGCAATATTAGTACAGCTGACCAACTACAAAAGTTTGAGAAGGAATTC
AAGGAAGAGTCACTTAAAGAAGAAAATTCAGCTCTTGAGAAAATTGCTGCAATACTGGCA
ACTCTAACAACTAAGAAAGCAGCTATGGTGTCAGAGGCGTCAAGAAACTTCCAGGATTCT
AGTGCAAAAGAAAATAAGCAGCTGTTCGAAGAAATATCAGGTGTCCAGCAGGTTTCAGCT
AGTGCAAAGCAAAAATTGAATGGATACATTAATGAGGTGAAACAAAATTTCTTGGAAGAC
ACGTTCATGTATGCAGAAAATAGTCTGACTTTGGAAAATTGCCTTCAAGAGTGCACAAAC
AAGGTGGATAACTTGAATGAACAATTGGGAGAAACTCAATTAGGAGTCCATCAAATTCTT
ACAAACAATCTTGCAGATATAGAACATATTTCACGGGAAAGCTCCACCAGAATTGGCTGT
GCATATGACAAATTTCTCTCTACTTCCTCATGTGTGGATGGGAAAGTTGAAGCCCATAGT
CGTGATTTGCAGACTTCTTTCAATGATTCTTTGACATTGGACATGGAACACAAGAAAAGA
ATCGAGTCAACGAGTAACATCTGTCTGAATCAGCTGAGCTCTACTCAACAGAACCATGGT
GAATGTATATCAGATATACAATGTACAGCAGAACAATGCCTCCAAAAAGATTACATGGTT
GATATGTGCACTGATAAGACACCAATGAAGCGACCGATACAAATTCCGAGCCTTTCATCC
ATTGAAGATATGAGAACAGTGATATCTAAAGTTAGTCCGGAGAATGAATCGAAGTGGAGT
AGTGCTGAGGGCAAGAATCAGAGGCAATTACAACAATGTAATGGAGTATCTCCCAATAGA
ACTCCATTTGCAGATGTCAATTGA