Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049448
CDS Infomation

pacid=37477495 polypeptide=PGSC0003DMP400033379 locus=PGSC0003DMG400019212 ID=PGSC0003DMT400049448.v4.03 annot-version=v4.03
Sequence

ATGAGTTCACGAGAGATATCCATGGATACAATTATGGAAGATGAAGATTCCTTTGGTTCT
AATACAAATGCAATCATCTACGCTGCTTCTGATATGTCAGGCTGGACTCACAGTTTGATC
TCAGATAACAATATTCCTAATTCGTCCTCTTCTACCAGTGTAAACGTACACCACCAGCAG
CATCAGATTTCGACTGCTGCTGGTGATGATGATGATTCGATGTTTGTATCATCAAGTGCA
TCTTCCAGCTGGTTTAATAATAATAAACAAATTGATGATCACCAAGAGATTAGGATATTT
AATGTTGATTTCAGAGCACTTTGCAACAACACCAGCGGTGGATCCGAATTTCGCGGCCAT
TTATTGCCAGATACTGGTAGGACATTGAACGAAGAGACTAGCATTAGGCTGGTCAATGCG
TTGATGGCTTGTGCCGAGGCGATCCAAGAGAACAACTTAACTCTAGCGGATGTACTAAAC
AGTCAATTAAGAAGATTTACAATTGGAGGAACAATGAAGAAAGTGGCGACTTATTTTGCA
GGAGCTTTGTATCATAAGATTCACAGATTGAATCCACGAGATATTGTTGAATCATTCTAT
TCCACGGACCAACTCTTGCATATGAGCTTCTACGAGAGTTGCCCCTTACTCAAATTCGCG
CACTTCTCAGCCAATCAATCCATTTTGGAGGCCTTCGCTGATTCCAAGAGAGTACATGTA
ATTGATTTCAGCTTGAATCAAGGTTTGCAATGGCCGGCACTTTTGCAGGCTCTCGCTTTG
CGTCCTGGCGGTCCACCAGCTTTTCGGCTCTCAGGAATTAGTGGCCAACCTAAGTTTCAT
GAAGGTAGCGATCCCTTACGGGAAGTTGGTTTTAAACTCGCCCAATTTGCAGAGTCAATT
CGTGTAGAATTTGAATTCTGTGGATTCATGGTCCATACTTTAGCTGATCTTGAAGCACCA
ATGTTGAATATTAGACCCAGTAATGTGGAAACAGTGGCTGTGAACTCTGTTTTTGAGCTT
CACCGTTTGTTTTCCATTCCAGGAGCATTTGAGGAAGTGTTGGATTTAATAAAACAAATA
CAACCGAAGATTGTGACCATCGCCGAACAAGAAGCGAATCACAATGGGAGTTGCTATATG
AACAGGATTAAGGAAGCATGGCTTTACTATTCAACAATGTTCTACGTGCTGGAGAACTCA
GAGTCAACTCAGACCAACAATCGAGACTTGGATATGGCGGAGCAGTACCTAGGGCGGGAG
GTCTATAATTTGGTGGCTTGCGAAGGAACTAAGCAAATTGTGCGACACGAGACGTTGAGT
CAATGGCGAGTGAGGTTTAACTCTGCAGGGTTCAACCTGGTTCCCCTGGGTTCAAATACG
TACAGAAATGCAAACATGTTATTGGCCTTGTTCACAAATGAAGAAGGATATAGAGTAGAG
GAGAAAGATGGGTGTCTTATGTTGAGTTGTCATAGTCGCCCGCTCTTCACCACATCTGCT
TGGTGCGGCTATGTCGCCAAGTCTAGGGATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400033379
PEP Infomation

pacid=37477495 transcript=PGSC0003DMT400049448 locus=PGSC0003DMG400019212 ID=PGSC0003DMT400049448.v4.03 annot-version=v4.03
Sequence

MSSREISMDTIMEDEDSFGSNTNAIIYAASDMSGWTHSLISDNNIPNSSSSTSVNVHHQQ
HQISTAAGDDDDSMFVSSSASSSWFNNNKQIDDHQEIRIFNVDFRALCNNTSGGSEFRGH
LLPDTGRTLNEETSIRLVNALMACAEAIQENNLTLADVLNSQLRRFTIGGTMKKVATYFA
GALYHKIHRLNPRDIVESFYSTDQLLHMSFYESCPLLKFAHFSANQSILEAFADSKRVHV
IDFSLNQGLQWPALLQALALRPGGPPAFRLSGISGQPKFHEGSDPLREVGFKLAQFAESI
RVEFEFCGFMVHTLADLEAPMLNIRPSNVETVAVNSVFELHRLFSIPGAFEEVLDLIKQI
QPKIVTIAEQEANHNGSCYMNRIKEAWLYYSTMFYVLENSESTQTNNRDLDMAEQYLGRE
VYNLVACEGTKQIVRHETLSQWRVRFNSAGFNLVPLGSNTYRNANMLLALFTNEEGYRVE
EKDGCLMLSCHSRPLFTTSAWCGYVAKSRD*

Transcript Sequence

Transcript ID

PGSC0003DMT400049448
Transcript Infomation

pacid=37477495 locus=PGSC0003DMG400019212 ID=PGSC0003DMT400049448.v4.03 annot-version=v4.03
Sequence

ATGAGTTCACGAGAGATATCCATGGATACAATTATGGAAGATGAAGATTCCTTTGGTTCT
AATACAAATGCAATCATCTACGCTGCTTCTGATATGTCAGGCTGGACTCACAGTTTGATC
TCAGATAACAATATTCCTAATTCGTCCTCTTCTACCAGTGTAAACGTACACCACCAGCAG
CATCAGATTTCGACTGCTGCTGGTGATGATGATGATTCGATGTTTGTATCATCAAGTGCA
TCTTCCAGCTGGTTTAATAATAATAAACAAATTGATGATCACCAAGAGATTAGGATATTT
AATGTTGATTTCAGAGCACTTTGCAACAACACCAGCGGTGGATCCGAATTTCGCGGCCAT
TTATTGCCAGATACTGGTAGGACATTGAACGAAGAGACTAGCATTAGGCTGGTCAATGCG
TTGATGGCTTGTGCCGAGGCGATCCAAGAGAACAACTTAACTCTAGCGGATGTACTAAAC
AGTCAATTAAGAAGATTTACAATTGGAGGAACAATGAAGAAAGTGGCGACTTATTTTGCA
GGAGCTTTGTATCATAAGATTCACAGATTGAATCCACGAGATATTGTTGAATCATTCTAT
TCCACGGACCAACTCTTGCATATGAGCTTCTACGAGAGTTGCCCCTTACTCAAATTCGCG
CACTTCTCAGCCAATCAATCCATTTTGGAGGCCTTCGCTGATTCCAAGAGAGTACATGTA
ATTGATTTCAGCTTGAATCAAGGTTTGCAATGGCCGGCACTTTTGCAGGCTCTCGCTTTG
CGTCCTGGCGGTCCACCAGCTTTTCGGCTCTCAGGAATTAGTGGCCAACCTAAGTTTCAT
GAAGGTAGCGATCCCTTACGGGAAGTTGGTTTTAAACTCGCCCAATTTGCAGAGTCAATT
CGTGTAGAATTTGAATTCTGTGGATTCATGGTCCATACTTTAGCTGATCTTGAAGCACCA
ATGTTGAATATTAGACCCAGTAATGTGGAAACAGTGGCTGTGAACTCTGTTTTTGAGCTT
CACCGTTTGTTTTCCATTCCAGGAGCATTTGAGGAAGTGTTGGATTTAATAAAACAAATA
CAACCGAAGATTGTGACCATCGCCGAACAAGAAGCGAATCACAATGGGAGTTGCTATATG
AACAGGATTAAGGAAGCATGGCTTTACTATTCAACAATGTTCTACGTGCTGGAGAACTCA
GAGTCAACTCAGACCAACAATCGAGACTTGGATATGGCGGAGCAGTACCTAGGGCGGGAG
GTCTATAATTTGGTGGCTTGCGAAGGAACTAAGCAAATTGTGCGACACGAGACGTTGAGT
CAATGGCGAGTGAGGTTTAACTCTGCAGGGTTCAACCTGGTTCCCCTGGGTTCAAATACG
TACAGAAATGCAAACATGTTATTGGCCTTGTTCACAAATGAAGAAGGATATAGAGTAGAG
GAGAAAGATGGGTGTCTTATGTTGAGTTGTCATAGTCGCCCGCTCTTCACCACATCTGCT
TGGTGCGGCTATGTCGCCAAGTCTAGGGATTAG