Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049441
CDS Infomation

pacid=37479151 polypeptide=PGSC0003DMP400033372 locus=PGSC0003DMG400019208 ID=PGSC0003DMT400049441.v4.03 annot-version=v4.03
Sequence

ATGGCCGGCAAGGGAGAAGGACCGGCGATCGGAATTGATCTCGGTACTACATACTCATGC
GTCGGTGTATGGCAACACGATCGTGTTGAAATCATTGCCAATGATCAAGGTAACAGAACG
ACGCCGTCCTACGTTGGTTTCACTGATTCTGAGCGTCTCATTGGTGATGCTGCCAAAAAT
CAAGTCGCCATGAACCCTATCAACACAGTTTTCGATGCTAAAAGGTTGATTGGTAGGAGA
TTTAGTGATGCTTCTGTGCAGAGTGACATGAAATTATGGCCATTCAAGGTCATTCCTGGT
CCTGGCGATAAGCCCATGATTGTTGTCAACTACAAGGGTGAGGACAAGCAGTTTTCTGCT
GAGGAGATCTCATCTATGGTGCTCATTAAGATGAAAGAGATTGCTGAAGCTTTCCTTGGA
TCAACTGTTAAGAATGCTGTGGTTACTGTTCCAGCCTACTTTAATGACTCTCAACGTCAG
GCCACCAAGGATGCTGGTGTTATTTCTGGGCTAAATGTTATGCGTATTATCAATGAACCT
ACAGCAGCTGCTATTGCTTATGGTCTTGATAAGAAGGCAACCAGTGTTGGTGAGAAGAAT
GTGCTCATCTTTGATCTTGGTGGTGGTACATTTGATGTTTCTCTACTCACAATTGAGGAA
GGTATCTTTGAGGTGAAAGCTACTGCTGGAGATACCCATCTTGGAGGCGAGGACTTTGAC
AACAGGATGGTAAATCATTTTGTCCAGGAATTTAAAAGGAAGAACAAAAAGGATATCAGT
GGTAATCCTAGGGCACTCAGGAGGTTGAGAACTGCATGTGAGAGGGCAAAGAGGACACTT
TCATCCACTGCCCAGACCACCATTGAAATTGACTCTCTGTACGAGGGTATTGATTTTTAC
TCCACCATCACACGTGCTAGATTTGAAGAGCTTAACATGGATCTGTTTAGGAAGTGTATG
GAACCAGTTGAGAAGTGTTTGAGGGATGCTAAGATGGACAAGAGCACAGTTCATGATGTC
GTTTTGGTTGGTGGCTCCACTAGAATCCCGAAGGTTCAACAACTTTTGCAGGACTTCTTC
AACGGGAAGGAGCTCTGCAAGAGCATTAACCCTGATGAGGCTGTTGCTTATGGTGCTGCA
GTGCAAGCTGCAATTTTGAGTGGTGAGGGTAATGAGAAGGTGCAGGACCTTTTGCTGTTG
GATGTTGCCCCTCTGTCCCTTGGTCTGGAAACAGCTGGTGGTGTCATGACTGTGTTGATT
CCCAGAAACACGACTATCCCAACCAAGAAGGAGCAGGTCTTCTCAACCTACTCTGACAAC
CAGCCTGGTGTGTTGATTCAAGTGTATGAAGGTGAGAGAACAAGGACCAGGGACAACAAC
TTGCTTGGCAAATTTGAGCTTTCTGGTATCCCTCCTGCCCCCAGGGGAGTTCCTCAAATC
ACAGTGTGCTTTGACATTGATGCGAATGGTATCTTAAATGTCTCTGCTGAGGATAAGACC
ACCGGACAGAAGAACAAGATTACCATCACCAATGACAAGGGCAGACTCTCAAAGGAGGAG
ATCGAAAAGATGGTTCAGGAAGCAGAGAAATACAAATCTGAGGATGAGGAGCACAAGAAG
AAGGTTGAGGCAAAGAATGCTTTGGAGAACTATGCATACAATATGAGGAACACAATTAAG
GATGAGAAGATTGCATCCAAACTGTCCGCTGATGACAAGACTAAGATTGACGATGCTATT
GAGCAAGCCATCCAGTGGCTCGATGGCAACCAGCTTGCTGAGGCTGAAGAGTTTGAGGAC
AAAATGAAAGAGCTAGAGAGTCTCTGCAACCCAATCATTGCAAAAATGTACCAGGGGGCA
GGTGGTGACGGTGGTGACATGGATGACGAAGGTCCTGCTCCTAGTGGCGGTGGTGCTGGT
CCCAAGATTGAGGAGGTGGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033372
PEP Infomation

pacid=37479151 transcript=PGSC0003DMT400049441 locus=PGSC0003DMG400019208 ID=PGSC0003DMT400049441.v4.03 annot-version=v4.03
Sequence

MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFSDASVQSDMKLWPFKVIPGPGDKPMIVVNYKGEDKQFSA
EEISSMVLIKMKEIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVAPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK
KVEAKNALENYAYNMRNTIKDEKIASKLSADDKTKIDDAIEQAIQWLDGNQLAEAEEFED
KMKELESLCNPIIAKMYQGAGGDGGDMDDEGPAPSGGGAGPKIEEVD*

Transcript Sequence

Transcript ID

PGSC0003DMT400049441
Transcript Infomation

pacid=37479151 locus=PGSC0003DMG400019208 ID=PGSC0003DMT400049441.v4.03 annot-version=v4.03
Sequence

ATGGCCGGCAAGGGAGAAGGACCGGCGATCGGAATTGATCTCGGTACTACATACTCATGC
GTCGGTGTATGGCAACACGATCGTGTTGAAATCATTGCCAATGATCAAGGTAACAGAACG
ACGCCGTCCTACGTTGGTTTCACTGATTCTGAGCGTCTCATTGGTGATGCTGCCAAAAAT
CAAGTCGCCATGAACCCTATCAACACAGTTTTCGATGCTAAAAGGTTGATTGGTAGGAGA
TTTAGTGATGCTTCTGTGCAGAGTGACATGAAATTATGGCCATTCAAGGTCATTCCTGGT
CCTGGCGATAAGCCCATGATTGTTGTCAACTACAAGGGTGAGGACAAGCAGTTTTCTGCT
GAGGAGATCTCATCTATGGTGCTCATTAAGATGAAAGAGATTGCTGAAGCTTTCCTTGGA
TCAACTGTTAAGAATGCTGTGGTTACTGTTCCAGCCTACTTTAATGACTCTCAACGTCAG
GCCACCAAGGATGCTGGTGTTATTTCTGGGCTAAATGTTATGCGTATTATCAATGAACCT
ACAGCAGCTGCTATTGCTTATGGTCTTGATAAGAAGGCAACCAGTGTTGGTGAGAAGAAT
GTGCTCATCTTTGATCTTGGTGGTGGTACATTTGATGTTTCTCTACTCACAATTGAGGAA
GGTATCTTTGAGGTGAAAGCTACTGCTGGAGATACCCATCTTGGAGGCGAGGACTTTGAC
AACAGGATGGTAAATCATTTTGTCCAGGAATTTAAAAGGAAGAACAAAAAGGATATCAGT
GGTAATCCTAGGGCACTCAGGAGGTTGAGAACTGCATGTGAGAGGGCAAAGAGGACACTT
TCATCCACTGCCCAGACCACCATTGAAATTGACTCTCTGTACGAGGGTATTGATTTTTAC
TCCACCATCACACGTGCTAGATTTGAAGAGCTTAACATGGATCTGTTTAGGAAGTGTATG
GAACCAGTTGAGAAGTGTTTGAGGGATGCTAAGATGGACAAGAGCACAGTTCATGATGTC
GTTTTGGTTGGTGGCTCCACTAGAATCCCGAAGGTTCAACAACTTTTGCAGGACTTCTTC
AACGGGAAGGAGCTCTGCAAGAGCATTAACCCTGATGAGGCTGTTGCTTATGGTGCTGCA
GTGCAAGCTGCAATTTTGAGTGGTGAGGGTAATGAGAAGGTGCAGGACCTTTTGCTGTTG
GATGTTGCCCCTCTGTCCCTTGGTCTGGAAACAGCTGGTGGTGTCATGACTGTGTTGATT
CCCAGAAACACGACTATCCCAACCAAGAAGGAGCAGGTCTTCTCAACCTACTCTGACAAC
CAGCCTGGTGTGTTGATTCAAGTGTATGAAGGTGAGAGAACAAGGACCAGGGACAACAAC
TTGCTTGGCAAATTTGAGCTTTCTGGTATCCCTCCTGCCCCCAGGGGAGTTCCTCAAATC
ACAGTGTGCTTTGACATTGATGCGAATGGTATCTTAAATGTCTCTGCTGAGGATAAGACC
ACCGGACAGAAGAACAAGATTACCATCACCAATGACAAGGGCAGACTCTCAAAGGAGGAG
ATCGAAAAGATGGTTCAGGAAGCAGAGAAATACAAATCTGAGGATGAGGAGCACAAGAAG
AAGGTTGAGGCAAAGAATGCTTTGGAGAACTATGCATACAATATGAGGAACACAATTAAG
GATGAGAAGATTGCATCCAAACTGTCCGCTGATGACAAGACTAAGATTGACGATGCTATT
GAGCAAGCCATCCAGTGGCTCGATGGCAACCAGCTTGCTGAGGCTGAAGAGTTTGAGGAC
AAAATGAAAGAGCTAGAGAGTCTCTGCAACCCAATCATTGCAAAAATGTACCAGGGGGCA
GGTGGTGACGGTGGTGACATGGATGACGAAGGTCCTGCTCCTAGTGGCGGTGGTGCTGGT
CCCAAGATTGAGGAGGTGGACTAA