Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049440
CDS Infomation

pacid=37480378 polypeptide=PGSC0003DMP400033371 locus=PGSC0003DMG400019207 ID=PGSC0003DMT400049440.v4.03 annot-version=v4.03
Sequence

ATGTATCGCAGGACGCTGACTATAAACTGGGATGGTCTCGGAGAAGACGATGACGATGAT
CACTTCTTCGAGTCCCACGACCGCCTTTCCACGGTCGTTCCCCAAGACTTGGCGTCCTCG
GGGTCAGATGATGAGGTCGAATTTGAGGATAGTAGACGTTCCTTCTCGGCCTCACTTTCT
ATCAAGAATACTTTCCGAGGCCTTGAGATGGGGACAGCGAAAACAAAAACCGTCTCCATC
TCCAATCCTTCTCCGTCTCCACCTCCTCCTATTGTCATGGAAGACTACGGCATGTGGATG
GCTGAACCAGGAGATGTTAAAGAGCGTCGAAAACGCTTACTCCAGGGAATGGGGTTGACA
AGTAGTAAGGAACTCCTCAAGCTAACAAGTGCTAAAGTTGTGAGAGCCATTTCAAGAAAA
GTTGATACATGTCAAGATTCTTCCATACCAAAAGTTGAGATTAGTCCTTCCAATCAAGAG
CTAATTAAACAAGAGGAAGAACAAGAACAAGAACAAGAGCCAGAGGCTTCAAATTCGCCA
CCAATTTTGCTGCTCAGGTCGAGATCAGACGGTGACATAGAGTTTTTCTCCGTAAATACC
AAGAAAAGGAAAGAACAGTTACTCGGAGACGTTTCTAAACAACGTCTTACCAGGACATTT
TCAGGAGTTTTAGGACCAGCTACAAGAATATGCCAGTATACAAATTCTGCTGCTGTAATG
GTGCCGCATAAAAAGGGAACATGTAAATCTACATCACCACAAAATGGAGGTGAAACACCA
TCATCCACATTGCCAAATGGAAATGCTGATTCGGGATTTGCTTCGTTTTTCCTGATAAAA
AATCTGGACACTGGAAATGAATTCATTGTTAAAGAGTCCAATGAAGAGGGAATGTGGAAT
AAGCTCAGTGATCTACAAACAGGGAAGCAACTTTCCATGGAGGAATTTGAGAAATCTGTG
GGATACTCACCTGTTGTTAAGGAACTGATGCGCCGTGCAAATGTTTCAACAAATGATGAA
AGAAAACTTAACGTAAATGCGTATCTCAGCAAGAGTTTCAGATATAGCAAGAAAACAGGA
GTTGCTCTATTGAAGAACATAAAAGGAGTTGCAAATAGTATGAGCATGTCAAAAGTTGAT
AAAGAAATTGAGATACCTGCACTAGTGGAACAGAAACAGAAACAGAATTCCTCCCAATGG
ATTAAAGCGCGGCAGCAAGGAAAGATTCACAAAGAATTCACAGCTTTGCAATTGTGTCAG
GAAATTCAAGCTCATGAAGGCTCCATATGGACCATAAGATTCACCGCGGATGGTCGGTAT
CTAGCAACTGCAGGGGAAGACAGGGTGATTCATGTATGGGAAGTGCAAGAATGTGATGTT
ATGTCTACAAAACAATCCGATGATCCGAATTCTGTCAGTGACACACCAATGGCTGGTAGT
AATTCGGATCGTCCACCTCTGCCAGTTATGACTAATATGCAATCAGAAAGAAGGAAAAAG
GGGAAGACTTCTAATAAAAAGAAGGGAAACTCACTTCCAGAGTATGTAAATGTACCTGAA
ATTGTATTTGCTCTCTCAGACAAACCAGTATGCACTTTCAGTGGTCATCAAGATGATGTC
CTGGACCTATCTTGGTCAAGTTCTCAGCAACTCCTTTCATCCTCAATGGACAAGACAGTC
AGGCTATGGGATATCGAGACTCAGACCTGCTTAAAAATGTTTGCACATAACGATTATGTG
ACCTGCATACACTTCAATCCAGTAGATGACGACCACTTTATCAGCGGTTCACTGGATGGA
AAAGTTCGAATTTGGAATGTATCTGATCGGAAAGTTGTGGACTGGACAGATCTTCATGAA
ATGGTTACTGCTACTTGCTACTCTCCTGATGGCGAGGGTGCTTTAATTGGCTCACATAAA
GGGAGCTGTCGCATGTACAGTACCTCTGAATGCAAGCTGGAACAAAAGGACAGCTTTGAA
CTCGAACCCAAAAAGAAGTCCGTAGCCAAAAAAGTCACTGGTTTTCAGTTTGCTCCAGGG
AATCCAGCAGAAGTGCTTATAACTTCAGCTGATTCTCGTGTCAGAATTTTTGATGGATCG
GAAATGACCCATAAATTTAAAGGTTTACGGAATACAAGCAGCCAAATTTCAGCTACATTT
AGTCAAGATGGGAAGTATATCGTAAGTGCAAGTGAAGACTCTCAGGTGTATATCTGGAAG
AGAGAAGAACCTAAAAGTGCAACTAGTAAAACTAAAAGTGTAGTAAATGTTCAATCGTAC
GAGCACTTCCCATGTAAAGATGTTTCAGTTGCCATCACGTGGCCTGGCAGTATAAAGAAT
CAGCCACCACTTGCAGATCAGATACATTCAAGAAGGGATTCGAAACGTTCCCCACCACCT
CCACTTCCCATCAGTGGCTCTCCCACGAGGGAAGACAACTCGGCTGGTGCAAATAGCAAG
AGGAATTTACCACCTCTGCCGGCCAAGAAAAACAGTGCAGCGGAAAAAATCCAAACTTGT
CAAGATGAGGACTCAGCTCAAGAATCTCCAACAGATCCTGGAGTTGGTGCTAGTGAATCG
TTTTCATCGAGTTCTCCATCGATCAGAGATGGCGACTCACCTTCTGTGTCTTCGTCCAGC
AGGTTTGATGGTAGCAACAACCAAGGAAATAACATTATCCAATCCACAGCATGGGGCATG
GTAATTGTGACAGCAAGCTCGGGAGGGGAAATCAGAGTCTATCAAAACTTCGGGATGCCA
TTGAAAGCTAGTCGTCCGAACAATCTCTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400033371
PEP Infomation

pacid=37480378 transcript=PGSC0003DMT400049440 locus=PGSC0003DMG400019207 ID=PGSC0003DMT400049440.v4.03 annot-version=v4.03
Sequence

MYRRTLTINWDGLGEDDDDDHFFESHDRLSTVVPQDLASSGSDDEVEFEDSRRSFSASLS
IKNTFRGLEMGTAKTKTVSISNPSPSPPPPIVMEDYGMWMAEPGDVKERRKRLLQGMGLT
SSKELLKLTSAKVVRAISRKVDTCQDSSIPKVEISPSNQELIKQEEEQEQEQEPEASNSP
PILLLRSRSDGDIEFFSVNTKKRKEQLLGDVSKQRLTRTFSGVLGPATRICQYTNSAAVM
VPHKKGTCKSTSPQNGGETPSSTLPNGNADSGFASFFLIKNLDTGNEFIVKESNEEGMWN
KLSDLQTGKQLSMEEFEKSVGYSPVVKELMRRANVSTNDERKLNVNAYLSKSFRYSKKTG
VALLKNIKGVANSMSMSKVDKEIEIPALVEQKQKQNSSQWIKARQQGKIHKEFTALQLCQ
EIQAHEGSIWTIRFTADGRYLATAGEDRVIHVWEVQECDVMSTKQSDDPNSVSDTPMAGS
NSDRPPLPVMTNMQSERRKKGKTSNKKKGNSLPEYVNVPEIVFALSDKPVCTFSGHQDDV
LDLSWSSSQQLLSSSMDKTVRLWDIETQTCLKMFAHNDYVTCIHFNPVDDDHFISGSLDG
KVRIWNVSDRKVVDWTDLHEMVTATCYSPDGEGALIGSHKGSCRMYSTSECKLEQKDSFE
LEPKKKSVAKKVTGFQFAPGNPAEVLITSADSRVRIFDGSEMTHKFKGLRNTSSQISATF
SQDGKYIVSASEDSQVYIWKREEPKSATSKTKSVVNVQSYEHFPCKDVSVAITWPGSIKN
QPPLADQIHSRRDSKRSPPPPLPISGSPTREDNSAGANSKRNLPPLPAKKNSAAEKIQTC
QDEDSAQESPTDPGVGASESFSSSSPSIRDGDSPSVSSSSRFDGSNNQGNNIIQSTAWGM
VIVTASSGGEIRVYQNFGMPLKASRPNNLF*

Transcript Sequence

Transcript ID

PGSC0003DMT400049440
Transcript Infomation

pacid=37480378 locus=PGSC0003DMG400019207 ID=PGSC0003DMT400049440.v4.03 annot-version=v4.03
Sequence

ATGTATCGCAGGACGCTGACTATAAACTGGGATGGTCTCGGAGAAGACGATGACGATGAT
CACTTCTTCGAGTCCCACGACCGCCTTTCCACGGTCGTTCCCCAAGACTTGGCGTCCTCG
GGGTCAGATGATGAGGTCGAATTTGAGGATAGTAGACGTTCCTTCTCGGCCTCACTTTCT
ATCAAGAATACTTTCCGAGGCCTTGAGATGGGGACAGCGAAAACAAAAACCGTCTCCATC
TCCAATCCTTCTCCGTCTCCACCTCCTCCTATTGTCATGGAAGACTACGGCATGTGGATG
GCTGAACCAGGAGATGTTAAAGAGCGTCGAAAACGCTTACTCCAGGGAATGGGGTTGACA
AGTAGTAAGGAACTCCTCAAGCTAACAAGTGCTAAAGTTGTGAGAGCCATTTCAAGAAAA
GTTGATACATGTCAAGATTCTTCCATACCAAAAGTTGAGATTAGTCCTTCCAATCAAGAG
CTAATTAAACAAGAGGAAGAACAAGAACAAGAACAAGAGCCAGAGGCTTCAAATTCGCCA
CCAATTTTGCTGCTCAGGTCGAGATCAGACGGTGACATAGAGTTTTTCTCCGTAAATACC
AAGAAAAGGAAAGAACAGTTACTCGGAGACGTTTCTAAACAACGTCTTACCAGGACATTT
TCAGGAGTTTTAGGACCAGCTACAAGAATATGCCAGTATACAAATTCTGCTGCTGTAATG
GTGCCGCATAAAAAGGGAACATGTAAATCTACATCACCACAAAATGGAGGTGAAACACCA
TCATCCACATTGCCAAATGGAAATGCTGATTCGGGATTTGCTTCGTTTTTCCTGATAAAA
AATCTGGACACTGGAAATGAATTCATTGTTAAAGAGTCCAATGAAGAGGGAATGTGGAAT
AAGCTCAGTGATCTACAAACAGGGAAGCAACTTTCCATGGAGGAATTTGAGAAATCTGTG
GGATACTCACCTGTTGTTAAGGAACTGATGCGCCGTGCAAATGTTTCAACAAATGATGAA
AGAAAACTTAACGTAAATGCGTATCTCAGCAAGAGTTTCAGATATAGCAAGAAAACAGGA
GTTGCTCTATTGAAGAACATAAAAGGAGTTGCAAATAGTATGAGCATGTCAAAAGTTGAT
AAAGAAATTGAGATACCTGCACTAGTGGAACAGAAACAGAAACAGAATTCCTCCCAATGG
ATTAAAGCGCGGCAGCAAGGAAAGATTCACAAAGAATTCACAGCTTTGCAATTGTGTCAG
GAAATTCAAGCTCATGAAGGCTCCATATGGACCATAAGATTCACCGCGGATGGTCGGTAT
CTAGCAACTGCAGGGGAAGACAGGGTGATTCATGTATGGGAAGTGCAAGAATGTGATGTT
ATGTCTACAAAACAATCCGATGATCCGAATTCTGTCAGTGACACACCAATGGCTGGTAGT
AATTCGGATCGTCCACCTCTGCCAGTTATGACTAATATGCAATCAGAAAGAAGGAAAAAG
GGGAAGACTTCTAATAAAAAGAAGGGAAACTCACTTCCAGAGTATGTAAATGTACCTGAA
ATTGTATTTGCTCTCTCAGACAAACCAGTATGCACTTTCAGTGGTCATCAAGATGATGTC
CTGGACCTATCTTGGTCAAGTTCTCAGCAACTCCTTTCATCCTCAATGGACAAGACAGTC
AGGCTATGGGATATCGAGACTCAGACCTGCTTAAAAATGTTTGCACATAACGATTATGTG
ACCTGCATACACTTCAATCCAGTAGATGACGACCACTTTATCAGCGGTTCACTGGATGGA
AAAGTTCGAATTTGGAATGTATCTGATCGGAAAGTTGTGGACTGGACAGATCTTCATGAA
ATGGTTACTGCTACTTGCTACTCTCCTGATGGCGAGGGTGCTTTAATTGGCTCACATAAA
GGGAGCTGTCGCATGTACAGTACCTCTGAATGCAAGCTGGAACAAAAGGACAGCTTTGAA
CTCGAACCCAAAAAGAAGTCCGTAGCCAAAAAAGTCACTGGTTTTCAGTTTGCTCCAGGG
AATCCAGCAGAAGTGCTTATAACTTCAGCTGATTCTCGTGTCAGAATTTTTGATGGATCG
GAAATGACCCATAAATTTAAAGGTTTACGGAATACAAGCAGCCAAATTTCAGCTACATTT
AGTCAAGATGGGAAGTATATCGTAAGTGCAAGTGAAGACTCTCAGGTGTATATCTGGAAG
AGAGAAGAACCTAAAAGTGCAACTAGTAAAACTAAAAGTGTAGTAAATGTTCAATCGTAC
GAGCACTTCCCATGTAAAGATGTTTCAGTTGCCATCACGTGGCCTGGCAGTATAAAGAAT
CAGCCACCACTTGCAGATCAGATACATTCAAGAAGGGATTCGAAACGTTCCCCACCACCT
CCACTTCCCATCAGTGGCTCTCCCACGAGGGAAGACAACTCGGCTGGTGCAAATAGCAAG
AGGAATTTACCACCTCTGCCGGCCAAGAAAAACAGTGCAGCGGAAAAAATCCAAACTTGT
CAAGATGAGGACTCAGCTCAAGAATCTCCAACAGATCCTGGAGTTGGTGCTAGTGAATCG
TTTTCATCGAGTTCTCCATCGATCAGAGATGGCGACTCACCTTCTGTGTCTTCGTCCAGC
AGGTTTGATGGTAGCAACAACCAAGGAAATAACATTATCCAATCCACAGCATGGGGCATG
GTAATTGTGACAGCAAGCTCGGGAGGGGAAATCAGAGTCTATCAAAACTTCGGGATGCCA
TTGAAAGCTAGTCGTCCGAACAATCTCTTTTGA