Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049404
CDS Infomation

pacid=37477732 polypeptide=PGSC0003DMP400033344 locus=PGSC0003DMG400019191 ID=PGSC0003DMT400049404.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGAAGGTGGATGATTGTGAGTTTTGGCTTCCTTCAAAGTTTCTGACGGATGAT
TTTGGATCCGGGTTTAACCCGTTTGGAACTCACTCGGATCTGAGTTCGCCGGTGGAGTCT
GTGATCGGGTCAGTAGATACAGAGAGTGATGAAGAAGAGTATATTAATGGGTTAACTCGG
AAAATGGCTAACTCTGCACTTCAGGACTCTGGGTTCGGCTATGGAAACACCAAGGGTTGG
AGTTTATCATGTTCGCCTCAGTCGACGTTATACGGGTGCAAGCAGGGATCAAGCCATGGA
AGCCCAAACTGTCCTTCACAGGCCTCTTCCCCGCCGCCGGTGAACCAAAGGGATAGAGCT
TTTGATCAATTTTATGCGGCTGCCGGAGAAGTCGCGAGGATTAGGATGATGGAGGAAGCT
GCCGGACTTTATCAGACAAAAACTGGATTGCCCCCAAAATATTCAAATCAGCCGTCGCTC
TCTTACCAGCAGTTGCAAATAGCTCAATTTCAGCGATTGAAACAGCAACAGTTAATGAAG
CAAGGCCATGGAGTCTTGGGTTCTGGTAAAGGTGGATTTGAGCAGTATCCGCTGAACCAG
AACCACCAGCAATTCTCTCATAGCAGAGGCCAAAATGGAGCTGCTAGACCTATGAATTCT
TCAATTTCTAGTTGGTCTTCGTTGCAACAATCTCAGTTTCAGCAGCAGCCTGGCTCAGGC
ATGCGCGCTGTTTTCCTGGGAAATCAAAATCCAAAAAGAGAGTGCGCTGGAACTGGTGTT
TTCTTGCCCAGAAGAATTGGGACACAAGCTGAAACTCGAAAGAAACCAGGATGTTCAACA
GTTTTACTACCAGACAGAGTGGTCCAGGCCCTGAACTTGAACTTAGAAGCTAGGCAACAG
AATAATCAGGTTCAAGCCACATGTTATCAAGGCAGAACCGGGTTGATTCGTTCCAATGGT
TTGCAATATCCAAATAATACGGCAGTGGCTCAACCCAGACGTAATTTGAGATCGGGCAGT
ACATACTCACGACCACCAACGATGTCACAAGAGCTACTTCTTCCGCAGGATTGGACTTAC
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400033344
PEP Infomation

pacid=37477732 transcript=PGSC0003DMT400049404 locus=PGSC0003DMG400019191 ID=PGSC0003DMT400049404.v4.03 annot-version=v4.03
Sequence

MAKKVDDCEFWLPSKFLTDDFGSGFNPFGTHSDLSSPVESVIGSVDTESDEEEYINGLTR
KMANSALQDSGFGYGNTKGWSLSCSPQSTLYGCKQGSSHGSPNCPSQASSPPPVNQRDRA
FDQFYAAAGEVARIRMMEEAAGLYQTKTGLPPKYSNQPSLSYQQLQIAQFQRLKQQQLMK
QGHGVLGSGKGGFEQYPLNQNHQQFSHSRGQNGAARPMNSSISSWSSLQQSQFQQQPGSG
MRAVFLGNQNPKRECAGTGVFLPRRIGTQAETRKKPGCSTVLLPDRVVQALNLNLEARQQ
NNQVQATCYQGRTGLIRSNGLQYPNNTAVAQPRRNLRSGSTYSRPPTMSQELLLPQDWTY
*

Transcript Sequence

Transcript ID

PGSC0003DMT400049404
Transcript Infomation

pacid=37477732 locus=PGSC0003DMG400019191 ID=PGSC0003DMT400049404.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGAAGGTGGATGATTGTGAGTTTTGGCTTCCTTCAAAGTTTCTGACGGATGAT
TTTGGATCCGGGTTTAACCCGTTTGGAACTCACTCGGATCTGAGTTCGCCGGTGGAGTCT
GTGATCGGGTCAGTAGATACAGAGAGTGATGAAGAAGAGTATATTAATGGGTTAACTCGG
AAAATGGCTAACTCTGCACTTCAGGACTCTGGGTTCGGCTATGGAAACACCAAGGGTTGG
AGTTTATCATGTTCGCCTCAGTCGACGTTATACGGGTGCAAGCAGGGATCAAGCCATGGA
AGCCCAAACTGTCCTTCACAGGCCTCTTCCCCGCCGCCGGTGAACCAAAGGGATAGAGCT
TTTGATCAATTTTATGCGGCTGCCGGAGAAGTCGCGAGGATTAGGATGATGGAGGAAGCT
GCCGGACTTTATCAGACAAAAACTGGATTGCCCCCAAAATATTCAAATCAGCCGTCGCTC
TCTTACCAGCAGTTGCAAATAGCTCAATTTCAGCGATTGAAACAGCAACAGTTAATGAAG
CAAGGCCATGGAGTCTTGGGTTCTGGTAAAGGTGGATTTGAGCAGTATCCGCTGAACCAG
AACCACCAGCAATTCTCTCATAGCAGAGGCCAAAATGGAGCTGCTAGACCTATGAATTCT
TCAATTTCTAGTTGGTCTTCGTTGCAACAATCTCAGTTTCAGCAGCAGCCTGGCTCAGGC
ATGCGCGCTGTTTTCCTGGGAAATCAAAATCCAAAAAGAGAGTGCGCTGGAACTGGTGTT
TTCTTGCCCAGAAGAATTGGGACACAAGCTGAAACTCGAAAGAAACCAGGATGTTCAACA
GTTTTACTACCAGACAGAGTGGTCCAGGCCCTGAACTTGAACTTAGAAGCTAGGCAACAG
AATAATCAGGTTCAAGCCACATGTTATCAAGGCAGAACCGGGTTGATTCGTTCCAATGGT
TTGCAATATCCAAATAATACGGCAGTGGCTCAACCCAGACGTAATTTGAGATCGGGCAGT
ACATACTCACGACCACCAACGATGTCACAAGAGCTACTTCTTCCGCAGGATTGGACTTAC
TGA