Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049392
CDS Infomation

pacid=37480214 polypeptide=PGSC0003DMP400033337 locus=PGSC0003DMG402019187 ID=PGSC0003DMT400049392.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAACTCATGAAACAGTTTTCAAGTCAGTACAAGAACTAGCAAATGACAATCAA
GTTCCAGAAAAGTATATTCATACACAAGGGTCAATCAATAGCTCTTCTCCTCTGCTGGAT
GTGCCAGTGGTTGACCTTAGCCTTCTCACATCGCCTGCCAGACAACAAGAGCTCAACAAA
CTTCAATCAGGCCTCGAGTTTTGTGGCTGCATCCAGGTCATAAATCACGGACTAGTTGAT
TCATTTCTTGACAAAGTGCATGAAATTAGCAAACAGTTCTTTGCTCTTCCAGCTGAAGAG
AAGCTTAAATATGCCAGAACAGTTGATGACATTTATGGATACGGAAACGATTCAGTTCTT
TCAGATAAGCAAAAGCTTGATTGGACTGACAGATTGTATCTAAATGTGTTCCCTGAAGAT
ATAAGAAACCTCAAATTGTGGCCCCAAAAACCTGAATGTTTCAGGGAAGTTCTTGAGGAA
TATATCAAGAATATGAAGTTGTTGAGTGAGTCCCTCCTAAAGGCCATGGCAGCATCATTG
AACTTGGAGGAGAACTGCTTTCTGGACCAGTGTGGAGAACGCGGAGATATGATTGCAAGA
TTCAACTTCTATCCTCCGTGTCCAACACCTGAGGTTGTACTCGGAGTCAAACCACATGCT
GATGCATCGGCCATTACCATCCTGTTGCAAGACAAAGAAGTTGAGGGGCTTCAGGTTCTC
AAAGATGATCAATGGTTCAGAGTGCCTATTGTCCCATATGGTCTACTCGTTAATGTTGGA
GATCAAGTTGAGATAATGAGCAATGGTATCTTTAAGAGCCCCGTGCACAGGGTGGTGACG
AATGCAGAACGAGAAAGAAACACCCTTGCTGTTTTCATTATGCCAGATGTAACTGTTGGG
ATTGGACCAGTGGAGAAGCTTATCAATGAGGAAAGGCCAAGAGCGTATAAGGACGTTAAG
AATTATGTTGAACTCTTCTTCCAAAGCTATCAGCACGGGAAAAGACCAATCGAAACAGCA
ATGATATGCCAAGAACAAGATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400033337
PEP Infomation

pacid=37480214 transcript=PGSC0003DMT400049392 locus=PGSC0003DMG402019187 ID=PGSC0003DMT400049392.v4.03 annot-version=v4.03
Sequence

MAETHETVFKSVQELANDNQVPEKYIHTQGSINSSSPLLDVPVVDLSLLTSPARQQELNK
LQSGLEFCGCIQVINHGLVDSFLDKVHEISKQFFALPAEEKLKYARTVDDIYGYGNDSVL
SDKQKLDWTDRLYLNVFPEDIRNLKLWPQKPECFREVLEEYIKNMKLLSESLLKAMAASL
NLEENCFLDQCGERGDMIARFNFYPPCPTPEVVLGVKPHADASAITILLQDKEVEGLQVL
KDDQWFRVPIVPYGLLVNVGDQVEIMSNGIFKSPVHRVVTNAERERNTLAVFIMPDVTVG
IGPVEKLINEERPRAYKDVKNYVELFFQSYQHGKRPIETAMICQEQD*

Transcript Sequence

Transcript ID

PGSC0003DMT400049392
Transcript Infomation

pacid=37480214 locus=PGSC0003DMG402019187 ID=PGSC0003DMT400049392.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAACTCATGAAACAGTTTTCAAGTCAGTACAAGAACTAGCAAATGACAATCAA
GTTCCAGAAAAGTATATTCATACACAAGGGTCAATCAATAGCTCTTCTCCTCTGCTGGAT
GTGCCAGTGGTTGACCTTAGCCTTCTCACATCGCCTGCCAGACAACAAGAGCTCAACAAA
CTTCAATCAGGCCTCGAGTTTTGTGGCTGCATCCAGGTCATAAATCACGGACTAGTTGAT
TCATTTCTTGACAAAGTGCATGAAATTAGCAAACAGTTCTTTGCTCTTCCAGCTGAAGAG
AAGCTTAAATATGCCAGAACAGTTGATGACATTTATGGATACGGAAACGATTCAGTTCTT
TCAGATAAGCAAAAGCTTGATTGGACTGACAGATTGTATCTAAATGTGTTCCCTGAAGAT
ATAAGAAACCTCAAATTGTGGCCCCAAAAACCTGAATGTTTCAGGGAAGTTCTTGAGGAA
TATATCAAGAATATGAAGTTGTTGAGTGAGTCCCTCCTAAAGGCCATGGCAGCATCATTG
AACTTGGAGGAGAACTGCTTTCTGGACCAGTGTGGAGAACGCGGAGATATGATTGCAAGA
TTCAACTTCTATCCTCCGTGTCCAACACCTGAGGTTGTACTCGGAGTCAAACCACATGCT
GATGCATCGGCCATTACCATCCTGTTGCAAGACAAAGAAGTTGAGGGGCTTCAGGTTCTC
AAAGATGATCAATGGTTCAGAGTGCCTATTGTCCCATATGGTCTACTCGTTAATGTTGGA
GATCAAGTTGAGATAATGAGCAATGGTATCTTTAAGAGCCCCGTGCACAGGGTGGTGACG
AATGCAGAACGAGAAAGAAACACCCTTGCTGTTTTCATTATGCCAGATGTAACTGTTGGG
ATTGGACCAGTGGAGAAGCTTATCAATGAGGAAAGGCCAAGAGCGTATAAGGACGTTAAG
AATTATGTTGAACTCTTCTTCCAAAGCTATCAGCACGGGAAAAGACCAATCGAAACAGCA
ATGATATGCCAAGAACAAGATTAG