Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049388
CDS Infomation

pacid=37477727 polypeptide=PGSC0003DMP400033333 locus=PGSC0003DMG401019187 ID=PGSC0003DMT400049388.v4.03 annot-version=v4.03
Sequence

ATGTCAAGAAGATATGACAGCCGCACAACTATCTTCTCCCCTGAAGGTCGTTTATATCAG
GTTGAATATGCAATGGAAGCTATTGGAAATGCAGGCAGTGCAATAGGTATCTTAGCTAAA
GATGGTGTGGTGTTGGTAGGTGAAAAGAAGGTCACTTCAAAGCTTCTCCAGACCTCGACA
TCCACCGAGAAGATGTACAAGATTGACGACCATATTGCCTGTGCTGTGGCTGGAATGATG
TCAGATGCCAACATCCTCATTAACACTGCGAGGGTTCAAGCTCAACGCTATACTTTTGCT
TATCAAGAACCAATGCCTGTTGAACAACTAGTTCAGTCTCTGTGCGACACCAAGCAAGGC
TACACACAGTTTGGTGGGCTTCGTCCATTTGGTGTTTCCTTTCTTTTTGCAGGCTGGGAC
AAGAACTATGGCTTTCAACTGTACATGAGTGATCCAAGCGGCAATTATAGTGGTTGGAAA
GCTGCAGCAATTGGGGCCAACAATCAACCAGCACAGTCAATGTTGAAGCAGGACTACAAG
GATGACATGACAAGAGAGGAAGCTGTTCAACTTGTTTTGAAGGTGCTTAGTAAGACTATG
GATAGCACTAGTCTTACCTCAGACAAGCTTGAACTGGCAGAGGTATTCCATACCAATGGT
AAAGTCAAATACCAAGTGCACTCACTGGAATCTGTGAACAAGTTGCTCATACAGTATGGA
TTAACCCAACCAGATCCAGAGGCCGCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033333
PEP Infomation

pacid=37477727 transcript=PGSC0003DMT400049388 locus=PGSC0003DMG401019187 ID=PGSC0003DMT400049388.v4.03 annot-version=v4.03
Sequence

MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVTSKLLQTST
STEKMYKIDDHIACAVAGMMSDANILINTARVQAQRYTFAYQEPMPVEQLVQSLCDTKQG
YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYSGWKAAAIGANNQPAQSMLKQDYK
DDMTREEAVQLVLKVLSKTMDSTSLTSDKLELAEVFHTNGKVKYQVHSLESVNKLLIQYG
LTQPDPEAA*

Transcript Sequence

Transcript ID

PGSC0003DMT400049388
Transcript Infomation

pacid=37477727 locus=PGSC0003DMG401019187 ID=PGSC0003DMT400049388.v4.03 annot-version=v4.03
Sequence

ATGTCAAGAAGATATGACAGCCGCACAACTATCTTCTCCCCTGAAGGTCGTTTATATCAG
GTTGAATATGCAATGGAAGCTATTGGAAATGCAGGCAGTGCAATAGGTATCTTAGCTAAA
GATGGTGTGGTGTTGGTAGGTGAAAAGAAGGTCACTTCAAAGCTTCTCCAGACCTCGACA
TCCACCGAGAAGATGTACAAGATTGACGACCATATTGCCTGTGCTGTGGCTGGAATGATG
TCAGATGCCAACATCCTCATTAACACTGCGAGGGTTCAAGCTCAACGCTATACTTTTGCT
TATCAAGAACCAATGCCTGTTGAACAACTAGTTCAGTCTCTGTGCGACACCAAGCAAGGC
TACACACAGTTTGGTGGGCTTCGTCCATTTGGTGTTTCCTTTCTTTTTGCAGGCTGGGAC
AAGAACTATGGCTTTCAACTGTACATGAGTGATCCAAGCGGCAATTATAGTGGTTGGAAA
GCTGCAGCAATTGGGGCCAACAATCAACCAGCACAGTCAATGTTGAAGCAGGACTACAAG
GATGACATGACAAGAGAGGAAGCTGTTCAACTTGTTTTGAAGGTGCTTAGTAAGACTATG
GATAGCACTAGTCTTACCTCAGACAAGCTTGAACTGGCAGAGGTATTCCATACCAATGGT
AAAGTCAAATACCAAGTGCACTCACTGGAATCTGTGAACAAGTTGCTCATACAGTATGGA
TTAACCCAACCAGATCCAGAGGCCGCCTAA