Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049368
CDS Infomation

pacid=37478443 polypeptide=PGSC0003DMP400033318 locus=PGSC0003DMG400019179 ID=PGSC0003DMT400049368.v4.03 annot-version=v4.03
Sequence

ATGTCTAAACAAACATACAGAATCTGTTGTTTCCAAAGGAAATTCAAGTTGAAAGAAGCT
GAAGCACCTGATGAGATCAAAGACTTGTTTGAAAGATTTTCAGAAAATGGCATCATGACA
GCAGAACATTTATGCAAATTCTTGAAAGATGTGCAAGGTGAAGAAAATGTTACAAAAGAA
GAAGCTGAAACTGTGATGGAATCTGCACTCAAACTTGTTCATGAACATCTTAATATTGTT
TTCCATAGAAAAGGTCTCAATCTTGAAGGATTTTTTCGATATCTCTTCAGTGATCTTAAT
GTTTCTATCTCCACAGACAAAAAGGTTCACCATGACATGACTGCTCCATTGTCTCACTAT
TTCATTTACACCAGTCACAATACCTATCTCACTGGGAATCAACTCAATAGTGATTGCAGC
GACGTGCCTATAATCAAGGCACTCCAACAAGGCGTACGAGTGATTGAATTAGACATGTGG
CCAAATTCATCGAAAGACAATGTGGATATCCTTCACGGAGGGACACTAACACCTCCGGTG
GAACTTATCCAATGTTTGAAATCAATCAAGGAACATGCATTTGTGGCATCTGAATATCCT
GTAATTATAACTCTAGAAGACCACCTCACCCCTGATCTTCAGGCTAAAGCAGCTGAGATG
GTCACTCAAGTATTTGGAGATATACTGTTCACCTGTGGGGCAGAATGCTTGTCAGAATTC
CCGTCTCCAGAATCTTTGAAGGGGCGGATTATCATCTCAACTAAACCGCCAAAAGAATAT
CTTGAAAGTAAGAAACCAAGTGAGAAAGATGATGGTTCTCAGAAGGGGAAGAAATCATCA
GAGGAGAAAGCATGGGGAGCAGAAATTTCTGATCTTTCACAAAAAATGATAGCTTATTCT
GAGAATAAAGACAATGGAGAATGTCAAGACGATGAAGCTGATTCTCATCATGAGAACCCC
AATATACAGCAGAATATAGCTCCTGAGTATAAACACTTGATTGCTATCCAAGCAGGAAAA
TCAAAAGGTCCAACAAGTGAGTGGCTAACCGTGGATCCTATTAAGGTGAAACGTATTAGC
TTAAATGAAGAAAAGCTCATAAATGTTGCCCTCAATCATGGGAAAGATTTAATCAGGTTT
ACTCAGAGAAATTTGCTGAGAGTATATCCAAAAGGTATGCGAGTCGACTCTTCCAATTAC
AATCCACTAATGGGATGGATGCATGGAGCTCAGATGGTTGCATTCAACATGCAGGGACAT
GGAAGGCCTTTCTGGTTAATGCAAGGGATGTTCAGAGCAAATGGTGGCTGTGGTTATGTC
AAGAAACCAGAGCTTCTCTTGAAGACTGATGCAAATAATGAGGTCCATGATCCTAAAAGG
CTTTTATCAGTGAAAACTACACTGAAGGTGAAAGTATACATGGGAAAAGGCTGGCATTTG
GACTTCAAACGTACACATTTTGATGCATATTCTCCACCAGACTTCTACGTCAAGATTGGT
ATTGCTGGAGTCGCTGCAGATTCAACAGTTAAGAAAACCAAGGCAATAGAGGACAACTGG
ATACCGATATGGAATGATGAATTTGAGTTCCCATTGACAGTTCCAGAGCTAGCATTGCTT
CGCGTAGAAGTTCACGAATATGATATGTCAGAGATCGATGATTTTGGTGGACAAACTTGC
ATTCCTGTTTCAGAACTTAGAACAGGAATTCGAGCTGTGCCTATTTACAATGAAAAAGGA
GAGAAATATCCTTCTGTTAAGCTACTTATGCGCTTTGAATTTGTAATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400033318
PEP Infomation

pacid=37478443 transcript=PGSC0003DMT400049368 locus=PGSC0003DMG400019179 ID=PGSC0003DMT400049368.v4.03 annot-version=v4.03
Sequence

MSKQTYRICCFQRKFKLKEAEAPDEIKDLFERFSENGIMTAEHLCKFLKDVQGEENVTKE
EAETVMESALKLVHEHLNIVFHRKGLNLEGFFRYLFSDLNVSISTDKKVHHDMTAPLSHY
FIYTSHNTYLTGNQLNSDCSDVPIIKALQQGVRVIELDMWPNSSKDNVDILHGGTLTPPV
ELIQCLKSIKEHAFVASEYPVIITLEDHLTPDLQAKAAEMVTQVFGDILFTCGAECLSEF
PSPESLKGRIIISTKPPKEYLESKKPSEKDDGSQKGKKSSEEKAWGAEISDLSQKMIAYS
ENKDNGECQDDEADSHHENPNIQQNIAPEYKHLIAIQAGKSKGPTSEWLTVDPIKVKRIS
LNEEKLINVALNHGKDLIRFTQRNLLRVYPKGMRVDSSNYNPLMGWMHGAQMVAFNMQGH
GRPFWLMQGMFRANGGCGYVKKPELLLKTDANNEVHDPKRLLSVKTTLKVKVYMGKGWHL
DFKRTHFDAYSPPDFYVKIGIAGVAADSTVKKTKAIEDNWIPIWNDEFEFPLTVPELALL
RVEVHEYDMSEIDDFGGQTCIPVSELRTGIRAVPIYNEKGEKYPSVKLLMRFEFVI*

Transcript Sequence

Transcript ID

PGSC0003DMT400049368
Transcript Infomation

pacid=37478443 locus=PGSC0003DMG400019179 ID=PGSC0003DMT400049368.v4.03 annot-version=v4.03
Sequence

ATGTCTAAACAAACATACAGAATCTGTTGTTTCCAAAGGAAATTCAAGTTGAAAGAAGCT
GAAGCACCTGATGAGATCAAAGACTTGTTTGAAAGATTTTCAGAAAATGGCATCATGACA
GCAGAACATTTATGCAAATTCTTGAAAGATGTGCAAGGTGAAGAAAATGTTACAAAAGAA
GAAGCTGAAACTGTGATGGAATCTGCACTCAAACTTGTTCATGAACATCTTAATATTGTT
TTCCATAGAAAAGGTCTCAATCTTGAAGGATTTTTTCGATATCTCTTCAGTGATCTTAAT
GTTTCTATCTCCACAGACAAAAAGGTTCACCATGACATGACTGCTCCATTGTCTCACTAT
TTCATTTACACCAGTCACAATACCTATCTCACTGGGAATCAACTCAATAGTGATTGCAGC
GACGTGCCTATAATCAAGGCACTCCAACAAGGCGTACGAGTGATTGAATTAGACATGTGG
CCAAATTCATCGAAAGACAATGTGGATATCCTTCACGGAGGGACACTAACACCTCCGGTG
GAACTTATCCAATGTTTGAAATCAATCAAGGAACATGCATTTGTGGCATCTGAATATCCT
GTAATTATAACTCTAGAAGACCACCTCACCCCTGATCTTCAGGCTAAAGCAGCTGAGATG
GTCACTCAAGTATTTGGAGATATACTGTTCACCTGTGGGGCAGAATGCTTGTCAGAATTC
CCGTCTCCAGAATCTTTGAAGGGGCGGATTATCATCTCAACTAAACCGCCAAAAGAATAT
CTTGAAAGTAAGAAACCAAGTGAGAAAGATGATGGTTCTCAGAAGGGGAAGAAATCATCA
GAGGAGAAAGCATGGGGAGCAGAAATTTCTGATCTTTCACAAAAAATGATAGCTTATTCT
GAGAATAAAGACAATGGAGAATGTCAAGACGATGAAGCTGATTCTCATCATGAGAACCCC
AATATACAGCAGAATATAGCTCCTGAGTATAAACACTTGATTGCTATCCAAGCAGGAAAA
TCAAAAGGTCCAACAAGTGAGTGGCTAACCGTGGATCCTATTAAGGTGAAACGTATTAGC
TTAAATGAAGAAAAGCTCATAAATGTTGCCCTCAATCATGGGAAAGATTTAATCAGGTTT
ACTCAGAGAAATTTGCTGAGAGTATATCCAAAAGGTATGCGAGTCGACTCTTCCAATTAC
AATCCACTAATGGGATGGATGCATGGAGCTCAGATGGTTGCATTCAACATGCAGGGACAT
GGAAGGCCTTTCTGGTTAATGCAAGGGATGTTCAGAGCAAATGGTGGCTGTGGTTATGTC
AAGAAACCAGAGCTTCTCTTGAAGACTGATGCAAATAATGAGGTCCATGATCCTAAAAGG
CTTTTATCAGTGAAAACTACACTGAAGGTGAAAGTATACATGGGAAAAGGCTGGCATTTG
GACTTCAAACGTACACATTTTGATGCATATTCTCCACCAGACTTCTACGTCAAGATTGGT
ATTGCTGGAGTCGCTGCAGATTCAACAGTTAAGAAAACCAAGGCAATAGAGGACAACTGG
ATACCGATATGGAATGATGAATTTGAGTTCCCATTGACAGTTCCAGAGCTAGCATTGCTT
CGCGTAGAAGTTCACGAATATGATATGTCAGAGATCGATGATTTTGGTGGACAAACTTGC
ATTCCTGTTTCAGAACTTAGAACAGGAATTCGAGCTGTGCCTATTTACAATGAAAAAGGA
GAGAAATATCCTTCTGTTAAGCTACTTATGCGCTTTGAATTTGTAATATAA