Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049363
CDS Infomation

pacid=37477254 polypeptide=PGSC0003DMP400033313 locus=PGSC0003DMG400019177 ID=PGSC0003DMT400049363.v4.03 annot-version=v4.03
Sequence

ATGAGGAAAGTTGTAATCTTTCCTATTAAAGTGTGTTATAGGACAGTTTGGAATCATCCA
TTCCTTGTGGGTATGTTGTGTTTCTTGGCATTTCTGTACAGATCATTTCCTTTTGTGTTT
TCAATCTTGGTGTCTGTCTCCCCTATTCTTGTCTGCACTACTGCACTGCTTGGAACTTTA
CTAAGTTATGCTCAGCCTAATATACCTGAATTTGAATGGGAAGAAAACACAACTGATCAT
ATAGTGCCTTTGGAAACACGAGATGCTATTCCTGTTGAGAGTGATAATAGTTGTTACTTC
ACCGAGAGATATAGTGATCAAGAAAGGGATAAAGTAGACCAATCAACGCATAGCGAGGTT
CATAGGGGTAAAAGATTTGGTGATCATTCTGCTCTAATTGGTGGGCAAGTGGCAAGGGAG
TTTTATGAGCATAAGAATGAAGACAAATTTAGTGATGCTGAACTTATGGAGAACCAGTAT
TCTCCCACTTCGAAGGTTGATGATGAGAGCGTTGAGTTTGATAATGACAAATCAGTTGAT
TCTAGGAGGGTTAATCTTGATTCTCCTCTTGGTTCACCTTGGAAACATAGGGAGGAGGCC
TTATATTCAGGGTCTGATGGAGCAGAGAGCTCCTCTCCGGATGCTTCAATAGCTGATATT
ATGCCAATGCTTGATGAGCTCCATCCACTTTTAGATGAAGACAATCCTCAACTTGTCGGT
TTGTCACATGATGTATCTCATGCCCATTCAGAAAGTTCTACCAAGTCCTCCGAGAGTGAT
GATGATGTTTCTGAAGACCAGGAAGAAGTAGAAGTTGCAGATGATGAAGAAGAAGAAGAA
ACACGAGATACAGAAGGTCTAAAGTCTGCTATTACATGGACGGAGGAGGATCAGAGAAAT
CTGATGGACTTGGGAACCTCCGAGCTAGAAAGGAATCAACGATTGGAGAGTCTTATTGCA
AGGAGAAGATCACGAAAGAACATGAGTTTTACAGATGAAAAGAGTTTAATAGACTTGGTA
ACTGCTGATTTCATGCCTCCCATTTCAACAGCAAGACAGAACCCTTTTGATCTTCCTAAT
GATAACTATGGCCCTGGACTCCCTCCTATCCCTGGATCTGCTCCATCTATTTTGTTGCCA
AGGTATAGGCGGAACCCATTTGATCTTCCTTATGACCCAAGTGAAGAAAAATCTGATTTT
ACAGGAGACACTTTCGAACAAGAGATTATCACATCTCAACCAAAAGAGACATTTTTTAGG
AGGCATGAAAGTTTTAATGTTGGGCCCTCAATCTTTGGGTTGAACAAGAAAGATACACGT
TTTAGACCTTATTTTGTTCCTGATATGATGGCTGCTGAAGGAACAAGTTATTCACCATTT
CAAAGGCACCCCAACGATCTCAGTGATTCCAAAGTAAGTTCTGTTCTTGAAACAGAGTCA
CAGGGCTCAATTGAAGATCTTGAATACAAGAACCTCACTGAAGAAGATGTAGAAGACAAG
AACCGAAATGAAGACAAAAACCTCACAGATGAACATATCTTCAAGGAGCCAGAGCTGATA
TCCAAGATAGAGCATGCTACCGAGGATATTGGGCATGGAAGCCAATCCTCCGAAGAAGTA
GAATGTTTGATCCTAGGTGCATCTGATAAAAGAGATATTGAACTCGATGACACTGATCTA
AATATGGAAAATCATCATGAAGTGGTACCAATTGTGTTCCATGAAGAAACAACAACCATT
TCCATGGAACTTAATCCATCTAAAATTTGTTCAAAATCAGCAACTTCTGAACAAAAATGC
AGTAGTCAGTCAAGTTCTTCGTCATCATCAGAAGTAGGTGAAAGGATCTTTCCTGACAAA
GTAGTAGTGAGATTAAGTTCAGAGGAAGCGATGTGTCATGTTGAAACCATCTCTGAGAAT
AATGTGTCAGATCTGAACATCACAAGGAGTTCAGTGGAGGAGACTTCACATTTGGAACCT
ATTTATGATGCCAGTCCTCCTTCCATTAAGAAAAATACTTCTTCCTCCTCAATTGCTTCA
GATATGCTTCTAGAATCTGCCCCTGAGATGGAAAATAATCAAGACACTGAGAAGTCCATT
TCACAAATATTTTCATCAGCAGATTCCCAAGAATTAAGGCTGAGGGAGGCTATAACTGAC
AAAAATGAGCTTCATGTCGCAAAGTTGGAGATATCAAAACATGATGAAGTCTTTGGCAGT
CCAAGTGCTCCTCCAGTGCTTGTAGCAGATAGTCAGGCATCTAGTGATTCGAAATCGCCT
ACAAAAGAGGCACCTGTTTCAATGGAGAAAGAAAGGACCACAGAAAGCTTAAATATGTCA
AAAGATCAAGAAGTTCCTCCTGAGTCTGTTCTTAAGCCATCTAATGCTAAGATGGCAACT
GAAGAATCAGAGAGTTTGAAAAATATACCAATTCATAAGGTATCAAGTTTGAAAGACCAT
GAGATGGGACTACCAACTCTTGAACCAAGACCAACAAGAGACATTGATTTGATTAATAAG
CAGACCCTTGAAGAGAATGTTAACAGACACGTCCTTCATGATTCAATTGATGGTGATGTG
CATGTTAGAGAATCCAAAGGAAATGAAGCTTATCTACATTCACAGAATATGGGGACAGAC
TCAGCTATGAAACAAGTCATGAAAAATGATATAGATAAACCAAACACGAGCCTTCAACAA
CAATTAAAAACCGAATCAAGTCTCCAAAAAATTGTTGTATCTGAAAGAAGTGAAGCTGAT
GCAGGCAAAATAGATCAAGAAGATAAGGTAACTACCACCGAAAAGCCAAATCATGCAGTT
GAGTTGCCTCAAGAGACAGGTGTAGTTTCTGGTGGTGTTATAGGCAAGAAAGAAAACCAC
ACAATTCAGGCTCAAGTTCAAGTTCCAGTGACTTCAAAAGAAAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400033313
PEP Infomation

pacid=37477254 transcript=PGSC0003DMT400049363 locus=PGSC0003DMG400019177 ID=PGSC0003DMT400049363.v4.03 annot-version=v4.03
Sequence

MRKVVIFPIKVCYRTVWNHPFLVGMLCFLAFLYRSFPFVFSILVSVSPILVCTTALLGTL
LSYAQPNIPEFEWEENTTDHIVPLETRDAIPVESDNSCYFTERYSDQERDKVDQSTHSEV
HRGKRFGDHSALIGGQVAREFYEHKNEDKFSDAELMENQYSPTSKVDDESVEFDNDKSVD
SRRVNLDSPLGSPWKHREEALYSGSDGAESSSPDASIADIMPMLDELHPLLDEDNPQLVG
LSHDVSHAHSESSTKSSESDDDVSEDQEEVEVADDEEEEETRDTEGLKSAITWTEEDQRN
LMDLGTSELERNQRLESLIARRRSRKNMSFTDEKSLIDLVTADFMPPISTARQNPFDLPN
DNYGPGLPPIPGSAPSILLPRYRRNPFDLPYDPSEEKSDFTGDTFEQEIITSQPKETFFR
RHESFNVGPSIFGLNKKDTRFRPYFVPDMMAAEGTSYSPFQRHPNDLSDSKVSSVLETES
QGSIEDLEYKNLTEEDVEDKNRNEDKNLTDEHIFKEPELISKIEHATEDIGHGSQSSEEV
ECLILGASDKRDIELDDTDLNMENHHEVVPIVFHEETTTISMELNPSKICSKSATSEQKC
SSQSSSSSSSEVGERIFPDKVVVRLSSEEAMCHVETISENNVSDLNITRSSVEETSHLEP
IYDASPPSIKKNTSSSSIASDMLLESAPEMENNQDTEKSISQIFSSADSQELRLREAITD
KNELHVAKLEISKHDEVFGSPSAPPVLVADSQASSDSKSPTKEAPVSMEKERTTESLNMS
KDQEVPPESVLKPSNAKMATEESESLKNIPIHKVSSLKDHEMGLPTLEPRPTRDIDLINK
QTLEENVNRHVLHDSIDGDVHVRESKGNEAYLHSQNMGTDSAMKQVMKNDIDKPNTSLQQ
QLKTESSLQKIVVSERSEADAGKIDQEDKVTTTEKPNHAVELPQETGVVSGGVIGKKENH
TIQAQVQVPVTSKEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400049363
Transcript Infomation

pacid=37477254 locus=PGSC0003DMG400019177 ID=PGSC0003DMT400049363.v4.03 annot-version=v4.03
Sequence

ATGAGGAAAGTTGTAATCTTTCCTATTAAAGTGTGTTATAGGACAGTTTGGAATCATCCA
TTCCTTGTGGGTATGTTGTGTTTCTTGGCATTTCTGTACAGATCATTTCCTTTTGTGTTT
TCAATCTTGGTGTCTGTCTCCCCTATTCTTGTCTGCACTACTGCACTGCTTGGAACTTTA
CTAAGTTATGCTCAGCCTAATATACCTGAATTTGAATGGGAAGAAAACACAACTGATCAT
ATAGTGCCTTTGGAAACACGAGATGCTATTCCTGTTGAGAGTGATAATAGTTGTTACTTC
ACCGAGAGATATAGTGATCAAGAAAGGGATAAAGTAGACCAATCAACGCATAGCGAGGTT
CATAGGGGTAAAAGATTTGGTGATCATTCTGCTCTAATTGGTGGGCAAGTGGCAAGGGAG
TTTTATGAGCATAAGAATGAAGACAAATTTAGTGATGCTGAACTTATGGAGAACCAGTAT
TCTCCCACTTCGAAGGTTGATGATGAGAGCGTTGAGTTTGATAATGACAAATCAGTTGAT
TCTAGGAGGGTTAATCTTGATTCTCCTCTTGGTTCACCTTGGAAACATAGGGAGGAGGCC
TTATATTCAGGGTCTGATGGAGCAGAGAGCTCCTCTCCGGATGCTTCAATAGCTGATATT
ATGCCAATGCTTGATGAGCTCCATCCACTTTTAGATGAAGACAATCCTCAACTTGTCGGT
TTGTCACATGATGTATCTCATGCCCATTCAGAAAGTTCTACCAAGTCCTCCGAGAGTGAT
GATGATGTTTCTGAAGACCAGGAAGAAGTAGAAGTTGCAGATGATGAAGAAGAAGAAGAA
ACACGAGATACAGAAGGTCTAAAGTCTGCTATTACATGGACGGAGGAGGATCAGAGAAAT
CTGATGGACTTGGGAACCTCCGAGCTAGAAAGGAATCAACGATTGGAGAGTCTTATTGCA
AGGAGAAGATCACGAAAGAACATGAGTTTTACAGATGAAAAGAGTTTAATAGACTTGGTA
ACTGCTGATTTCATGCCTCCCATTTCAACAGCAAGACAGAACCCTTTTGATCTTCCTAAT
GATAACTATGGCCCTGGACTCCCTCCTATCCCTGGATCTGCTCCATCTATTTTGTTGCCA
AGGTATAGGCGGAACCCATTTGATCTTCCTTATGACCCAAGTGAAGAAAAATCTGATTTT
ACAGGAGACACTTTCGAACAAGAGATTATCACATCTCAACCAAAAGAGACATTTTTTAGG
AGGCATGAAAGTTTTAATGTTGGGCCCTCAATCTTTGGGTTGAACAAGAAAGATACACGT
TTTAGACCTTATTTTGTTCCTGATATGATGGCTGCTGAAGGAACAAGTTATTCACCATTT
CAAAGGCACCCCAACGATCTCAGTGATTCCAAAGTAAGTTCTGTTCTTGAAACAGAGTCA
CAGGGCTCAATTGAAGATCTTGAATACAAGAACCTCACTGAAGAAGATGTAGAAGACAAG
AACCGAAATGAAGACAAAAACCTCACAGATGAACATATCTTCAAGGAGCCAGAGCTGATA
TCCAAGATAGAGCATGCTACCGAGGATATTGGGCATGGAAGCCAATCCTCCGAAGAAGTA
GAATGTTTGATCCTAGGTGCATCTGATAAAAGAGATATTGAACTCGATGACACTGATCTA
AATATGGAAAATCATCATGAAGTGGTACCAATTGTGTTCCATGAAGAAACAACAACCATT
TCCATGGAACTTAATCCATCTAAAATTTGTTCAAAATCAGCAACTTCTGAACAAAAATGC
AGTAGTCAGTCAAGTTCTTCGTCATCATCAGAAGTAGGTGAAAGGATCTTTCCTGACAAA
GTAGTAGTGAGATTAAGTTCAGAGGAAGCGATGTGTCATGTTGAAACCATCTCTGAGAAT
AATGTGTCAGATCTGAACATCACAAGGAGTTCAGTGGAGGAGACTTCACATTTGGAACCT
ATTTATGATGCCAGTCCTCCTTCCATTAAGAAAAATACTTCTTCCTCCTCAATTGCTTCA
GATATGCTTCTAGAATCTGCCCCTGAGATGGAAAATAATCAAGACACTGAGAAGTCCATT
TCACAAATATTTTCATCAGCAGATTCCCAAGAATTAAGGCTGAGGGAGGCTATAACTGAC
AAAAATGAGCTTCATGTCGCAAAGTTGGAGATATCAAAACATGATGAAGTCTTTGGCAGT
CCAAGTGCTCCTCCAGTGCTTGTAGCAGATAGTCAGGCATCTAGTGATTCGAAATCGCCT
ACAAAAGAGGCACCTGTTTCAATGGAGAAAGAAAGGACCACAGAAAGCTTAAATATGTCA
AAAGATCAAGAAGTTCCTCCTGAGTCTGTTCTTAAGCCATCTAATGCTAAGATGGCAACT
GAAGAATCAGAGAGTTTGAAAAATATACCAATTCATAAGGTATCAAGTTTGAAAGACCAT
GAGATGGGACTACCAACTCTTGAACCAAGACCAACAAGAGACATTGATTTGATTAATAAG
CAGACCCTTGAAGAGAATGTTAACAGACACGTCCTTCATGATTCAATTGATGGTGATGTG
CATGTTAGAGAATCCAAAGGAAATGAAGCTTATCTACATTCACAGAATATGGGGACAGAC
TCAGCTATGAAACAAGTCATGAAAAATGATATAGATAAACCAAACACGAGCCTTCAACAA
CAATTAAAAACCGAATCAAGTCTCCAAAAAATTGTTGTATCTGAAAGAAGTGAAGCTGAT
GCAGGCAAAATAGATCAAGAAGATAAGGTAACTACCACCGAAAAGCCAAATCATGCAGTT
GAGTTGCCTCAAGAGACAGGTGTAGTTTCTGGTGGTGTTATAGGCAAGAAAGAAAACCAC
ACAATTCAGGCTCAAGTTCAAGTTCCAGTGACTTCAAAAGAAAATTGA