Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049361
CDS Infomation

pacid=37476562 polypeptide=PGSC0003DMP400033312 locus=PGSC0003DMG402019176 ID=PGSC0003DMT400049361.v4.03 annot-version=v4.03
Sequence

ATGGATTCATCTGTTTCAACAGAGCCACTTAGCAAGAATGCTCTTAAGAGAGAAAAGAAG
GCAAAGGAGAAGGAGCACCTGGAACAGGAAAAGAAGGCAGCAGCAGTAGCTAAAAGGCAA
ATGGAGCAACACAATTTACCTGAGAATGATAATTTGGATCCTACTCAATACTTGGCGAAC
AGATTGAGGAACGTTGAGTCGTTGAGAGAATCTGGAATCAATCCATATCCACATAAGTTC
TTCATTACAATGTCTATTCCTGAATTTATCAGCAGATATGCTCATCTAAATACTGGAGAG
TTTCCTGAAGACATTGATATCTCCTTAGCAGGGAGAGTGATAAGCAAGCGAGCATCATCG
TCAAAACTCTATTTCTATGAACTGCTTGGTGGCGGGGCGAGAGTACAAGTACTGGCTAGT
GCAAGGGATTCTGATATGGATGCTGTTCAGTTTTCTAACTATCACTCTGGAGTGAAGCGA
GGTGACATCATTGGTGTCCGCGGATATCCTGGAAAGAGTAAGAGAGGAGAGCTAAGTATC
TTTGCAAAATCTTTTATAGTGCTAGCCCCTTGCCTACACATGTTACCGAGGCGGCTGACC
TCCTCTGTCGTAGATGAAACTCGGACACAGAGTTTCCAAGGAACAACAGCTAATGATACT
TGGACTCCAGGAGATCCGAGAAACCCCGAGTCATATGTGTTAAGGGATCAGGAAACTCGG
TATCGTCAAAGGTACTTAGATCTAATGATGAATCCAGATATTCGAACTTTATTCAGGACT
CGTGCCAGAATCATTTCTTACGTCAGGAATTTCCTCAATAGTCTTGAGTTTCTGGAGGTG
GAGACTCCTTCTATGAATTTGACAGCTGGAGGAGCTGCAGCCAGACCATTTATCACTCAC
CATAACGAGTTGGACACAAAACTGTTCATGCGTGTTTCCCCCGAGCTTTATCTTAAGAAG
TTGGTTGTTGGTGGATTTGATCGTGTTTATGAGATGGGGAAGCAATTCAGGAATGAAGGA
ATGGATTTAACTCACTCTCCTGAGTTCACAATGTGTGAACTTTATATGGCTTACGCTGAT
TACAACGACTTGATGGATCTGACAGAGCAGCTACTATCAGGTATGGTGAAGGAACTAACC
GGAAGCTATAAAATAAGGTACCATGCTAATGGATTGGATAATGAACCGATAGAAATTGAT
TTCACTCCTCCATTCAGAAAGATTGATATGTTGTCGGAGTTGGAGAAAGTCGCTAACATC
AGTATACCTAGTGATCTATCGAGTGAAACTGCTAATAAGTACTTGATAGATGTATGTGAA
AAGTTTGATGTCAAATGCCCTCCACCTCATACCACAACACGATTACTCGATAAGCTAGTT
GGTCATTTTATTGAAGTAAACTGCATAAATCCCACTTTTATTATCAACCATCCTGAGATC
ATGAGCCCACTGGCTAAATCACACAGATCAGAACCTGGTTTGACTGAGCGTTTCAACTTA
TTTGTTAACAGAAGAGAGCTATGTGATGCCTATACTGAACTAAATGATCCTGCAGCACAG
AGAGAACGTTTCGCTGAACAATTAAAGGACCGACAATTAGGAGACGACGAGGCAATGGAT
TTGGATGAATCCTTCATTATTGCATTGGAGTATGGATTGCCCCCTACTGGTGGACTAGGC
ATGGGGATTGATAGACTTACAATGTTGCTTACAGATTCACAAAATGTCAAGGAAGTCATC
CTCTTTCCAGCCATGAGATCACAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400033312
PEP Infomation

pacid=37476562 transcript=PGSC0003DMT400049361 locus=PGSC0003DMG402019176 ID=PGSC0003DMT400049361.v4.03 annot-version=v4.03
Sequence

MDSSVSTEPLSKNALKREKKAKEKEHLEQEKKAAAVAKRQMEQHNLPENDNLDPTQYLAN
RLRNVESLRESGINPYPHKFFITMSIPEFISRYAHLNTGEFPEDIDISLAGRVISKRASS
SKLYFYELLGGGARVQVLASARDSDMDAVQFSNYHSGVKRGDIIGVRGYPGKSKRGELSI
FAKSFIVLAPCLHMLPRRLTSSVVDETRTQSFQGTTANDTWTPGDPRNPESYVLRDQETR
YRQRYLDLMMNPDIRTLFRTRARIISYVRNFLNSLEFLEVETPSMNLTAGGAAARPFITH
HNELDTKLFMRVSPELYLKKLVVGGFDRVYEMGKQFRNEGMDLTHSPEFTMCELYMAYAD
YNDLMDLTEQLLSGMVKELTGSYKIRYHANGLDNEPIEIDFTPPFRKIDMLSELEKVANI
SIPSDLSSETANKYLIDVCEKFDVKCPPPHTTTRLLDKLVGHFIEVNCINPTFIINHPEI
MSPLAKSHRSEPGLTERFNLFVNRRELCDAYTELNDPAAQRERFAEQLKDRQLGDDEAMD
LDESFIIALEYGLPPTGGLGMGIDRLTMLLTDSQNVKEVILFPAMRSQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400049361
Transcript Infomation

pacid=37476562 locus=PGSC0003DMG402019176 ID=PGSC0003DMT400049361.v4.03 annot-version=v4.03
Sequence

ATGGATTCATCTGTTTCAACAGAGCCACTTAGCAAGAATGCTCTTAAGAGAGAAAAGAAG
GCAAAGGAGAAGGAGCACCTGGAACAGGAAAAGAAGGCAGCAGCAGTAGCTAAAAGGCAA
ATGGAGCAACACAATTTACCTGAGAATGATAATTTGGATCCTACTCAATACTTGGCGAAC
AGATTGAGGAACGTTGAGTCGTTGAGAGAATCTGGAATCAATCCATATCCACATAAGTTC
TTCATTACAATGTCTATTCCTGAATTTATCAGCAGATATGCTCATCTAAATACTGGAGAG
TTTCCTGAAGACATTGATATCTCCTTAGCAGGGAGAGTGATAAGCAAGCGAGCATCATCG
TCAAAACTCTATTTCTATGAACTGCTTGGTGGCGGGGCGAGAGTACAAGTACTGGCTAGT
GCAAGGGATTCTGATATGGATGCTGTTCAGTTTTCTAACTATCACTCTGGAGTGAAGCGA
GGTGACATCATTGGTGTCCGCGGATATCCTGGAAAGAGTAAGAGAGGAGAGCTAAGTATC
TTTGCAAAATCTTTTATAGTGCTAGCCCCTTGCCTACACATGTTACCGAGGCGGCTGACC
TCCTCTGTCGTAGATGAAACTCGGACACAGAGTTTCCAAGGAACAACAGCTAATGATACT
TGGACTCCAGGAGATCCGAGAAACCCCGAGTCATATGTGTTAAGGGATCAGGAAACTCGG
TATCGTCAAAGGTACTTAGATCTAATGATGAATCCAGATATTCGAACTTTATTCAGGACT
CGTGCCAGAATCATTTCTTACGTCAGGAATTTCCTCAATAGTCTTGAGTTTCTGGAGGTG
GAGACTCCTTCTATGAATTTGACAGCTGGAGGAGCTGCAGCCAGACCATTTATCACTCAC
CATAACGAGTTGGACACAAAACTGTTCATGCGTGTTTCCCCCGAGCTTTATCTTAAGAAG
TTGGTTGTTGGTGGATTTGATCGTGTTTATGAGATGGGGAAGCAATTCAGGAATGAAGGA
ATGGATTTAACTCACTCTCCTGAGTTCACAATGTGTGAACTTTATATGGCTTACGCTGAT
TACAACGACTTGATGGATCTGACAGAGCAGCTACTATCAGGTATGGTGAAGGAACTAACC
GGAAGCTATAAAATAAGGTACCATGCTAATGGATTGGATAATGAACCGATAGAAATTGAT
TTCACTCCTCCATTCAGAAAGATTGATATGTTGTCGGAGTTGGAGAAAGTCGCTAACATC
AGTATACCTAGTGATCTATCGAGTGAAACTGCTAATAAGTACTTGATAGATGTATGTGAA
AAGTTTGATGTCAAATGCCCTCCACCTCATACCACAACACGATTACTCGATAAGCTAGTT
GGTCATTTTATTGAAGTAAACTGCATAAATCCCACTTTTATTATCAACCATCCTGAGATC
ATGAGCCCACTGGCTAAATCACACAGATCAGAACCTGGTTTGACTGAGCGTTTCAACTTA
TTTGTTAACAGAAGAGAGCTATGTGATGCCTATACTGAACTAAATGATCCTGCAGCACAG
AGAGAACGTTTCGCTGAACAATTAAAGGACCGACAATTAGGAGACGACGAGGCAATGGAT
TTGGATGAATCCTTCATTATTGCATTGGAGTATGGATTGCCCCCTACTGGTGGACTAGGC
ATGGGGATTGATAGACTTACAATGTTGCTTACAGATTCACAAAATGTCAAGGAAGTCATC
CTCTTTCCAGCCATGAGATCACAATGA