Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049359
CDS Infomation

pacid=37477568 polypeptide=PGSC0003DMP400033310 locus=PGSC0003DMG401019176 ID=PGSC0003DMT400049359.v4.03 annot-version=v4.03
Sequence

ATGAAAGTTCCAGCAACTAAAATTCAAGAGGAAATGTCTATAGAGGCGAAAAGTTCCTAT
TTTGATCTACCAGCTTTGGATGTTTCTGTTGCATTTCCTCAAGCAACACCAGCGTCCGTC
TTTCCTAAATGCACTTCGGACTATTATCAGCTTGATGATCTCTTGACTTCTGAAGAGAAA
GCCATCAGACTGAAAGTGAGAGAGTGCATGGAAAAAGAAATTGCTCCTATAATGACAAAG
TACTGGGAGAAAGCAGAGTTTCCGTTTGAAGTCATTCCGAAACTTGGTGCTTTGCACATA
TCTGGTGGCACTATAAAGGGGTATGGTTGCCCAGGTTTATCAGTAACTGGAAGTGCCATT
GCCCTAGCAGAAATTGCCAGAGTTGATGCAAGCTGCTCTACATTCATTTTGGTGCATTCA
TCTTTGGCAATGCTCACTATTGGACTATTGGGATCAGAAATGCAAAGGCAAAAATACTTG
CCATCTCTGGCTGATCTTAGCAGTATATCTTGTTGGGGTCTAACTGAGCCAGACTATGGA
AGCGATGCAAGTGCTTTGAGGACCACTGCCACAAAGGTTGAAGGAGGCTGGATCCTTGAA
GGGCAAAAACGGTGGATAGGAAACAGCACTTTTGCAGATGTGTTGGTTATATTTGCTAGA
AACACAGCCACAAACCAAATAAATGGTTTCATTGTACAGAAGGATGCTCCAGGCTTGCAA
TCTACTAAAATAGAAAACAAAATTGGGCTGCGGATGGTTCAAAATGGAGATATCCTCTTT
AAGAAAGTGTTTGTTCCTGATGAGGATAGACTACCAGGTGTCAATTCTTTCAAGGATACA
AGTAAGGTGCTTGCTGTATCACGTGTCATGGTTGCATGGCTGCCTATAGGCATTGCAATG
GGTGTATATGATATGTGTCACAGGTATTTAAAAGAGAGGAAGCAATTCGGAGCTCCATTG
GCTGCTTTCCAGCTAAATCAACAGAAGCTGGTTCAGATGTTGGGAAACATTCAGGCTATG
CTTCTTGTTGGATGGCGCCTTTGCAAGTTGTACGAGAGTGGTAAAATGACTCCTGGTCAG
GCTAGCTTGGGGAAGTCATGGAATACCTTGAGGGCTAGAGAGACCGTTTCTCTTGGACGA
GAATTACTTGGTGGTAATGGTATCTTGGCGGATTTCCTAGTTGCAAAGGCATTCTGTGAC
TTGGAGCCCATCTATACGTTCGAGGGTACCTATGATATCAACACCCTAGTAACAGGTAGA
GAAATTACAGGTCTTCCTAGCTTCAAGCCAGCACCATTGAGGCCACAGAGTCGTCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033310
PEP Infomation

pacid=37477568 transcript=PGSC0003DMT400049359 locus=PGSC0003DMG401019176 ID=PGSC0003DMT400049359.v4.03 annot-version=v4.03
Sequence

MKVPATKIQEEMSIEAKSSYFDLPALDVSVAFPQATPASVFPKCTSDYYQLDDLLTSEEK
AIRLKVRECMEKEIAPIMTKYWEKAEFPFEVIPKLGALHISGGTIKGYGCPGLSVTGSAI
ALAEIARVDASCSTFILVHSSLAMLTIGLLGSEMQRQKYLPSLADLSSISCWGLTEPDYG
SDASALRTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTATNQINGFIVQKDAPGLQ
STKIENKIGLRMVQNGDILFKKVFVPDEDRLPGVNSFKDTSKVLAVSRVMVAWLPIGIAM
GVYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNIQAMLLVGWRLCKLYESGKMTPGQ
ASLGKSWNTLRARETVSLGRELLGGNGILADFLVAKAFCDLEPIYTFEGTYDINTLVTGR
EITGLPSFKPAPLRPQSRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400049359
Transcript Infomation

pacid=37477568 locus=PGSC0003DMG401019176 ID=PGSC0003DMT400049359.v4.03 annot-version=v4.03
Sequence

ATGAAAGTTCCAGCAACTAAAATTCAAGAGGAAATGTCTATAGAGGCGAAAAGTTCCTAT
TTTGATCTACCAGCTTTGGATGTTTCTGTTGCATTTCCTCAAGCAACACCAGCGTCCGTC
TTTCCTAAATGCACTTCGGACTATTATCAGCTTGATGATCTCTTGACTTCTGAAGAGAAA
GCCATCAGACTGAAAGTGAGAGAGTGCATGGAAAAAGAAATTGCTCCTATAATGACAAAG
TACTGGGAGAAAGCAGAGTTTCCGTTTGAAGTCATTCCGAAACTTGGTGCTTTGCACATA
TCTGGTGGCACTATAAAGGGGTATGGTTGCCCAGGTTTATCAGTAACTGGAAGTGCCATT
GCCCTAGCAGAAATTGCCAGAGTTGATGCAAGCTGCTCTACATTCATTTTGGTGCATTCA
TCTTTGGCAATGCTCACTATTGGACTATTGGGATCAGAAATGCAAAGGCAAAAATACTTG
CCATCTCTGGCTGATCTTAGCAGTATATCTTGTTGGGGTCTAACTGAGCCAGACTATGGA
AGCGATGCAAGTGCTTTGAGGACCACTGCCACAAAGGTTGAAGGAGGCTGGATCCTTGAA
GGGCAAAAACGGTGGATAGGAAACAGCACTTTTGCAGATGTGTTGGTTATATTTGCTAGA
AACACAGCCACAAACCAAATAAATGGTTTCATTGTACAGAAGGATGCTCCAGGCTTGCAA
TCTACTAAAATAGAAAACAAAATTGGGCTGCGGATGGTTCAAAATGGAGATATCCTCTTT
AAGAAAGTGTTTGTTCCTGATGAGGATAGACTACCAGGTGTCAATTCTTTCAAGGATACA
AGTAAGGTGCTTGCTGTATCACGTGTCATGGTTGCATGGCTGCCTATAGGCATTGCAATG
GGTGTATATGATATGTGTCACAGGTATTTAAAAGAGAGGAAGCAATTCGGAGCTCCATTG
GCTGCTTTCCAGCTAAATCAACAGAAGCTGGTTCAGATGTTGGGAAACATTCAGGCTATG
CTTCTTGTTGGATGGCGCCTTTGCAAGTTGTACGAGAGTGGTAAAATGACTCCTGGTCAG
GCTAGCTTGGGGAAGTCATGGAATACCTTGAGGGCTAGAGAGACCGTTTCTCTTGGACGA
GAATTACTTGGTGGTAATGGTATCTTGGCGGATTTCCTAGTTGCAAAGGCATTCTGTGAC
TTGGAGCCCATCTATACGTTCGAGGGTACCTATGATATCAACACCCTAGTAACAGGTAGA
GAAATTACAGGTCTTCCTAGCTTCAAGCCAGCACCATTGAGGCCACAGAGTCGTCTGTAA