Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049292
CDS Infomation

pacid=37477324 polypeptide=PGSC0003DMP400033283 locus=PGSC0003DMG400019158 ID=PGSC0003DMT400049292.v4.03 annot-version=v4.03
Sequence

ATGTTGAGATTGATAACAGGCAGAAGAGGAGCAAGTGGATTTGGGTCAGCTTCAACTGCT
GAGGAGGTTACTGATGGTGTTGATGCTACCGCTCTCACGGTTATTATTACAGGAGGTGCA
AGCGGCATCGGTTTGGAGACAACACGAGTTTTAGCTCTGAGGAAAGCCCATGTTATTGTT
GCTGCAAGAAATATGGAGGCTGCAAATGAAGCAAAACAACGCATTTTGAACGAAAACAGA
ACTGCACGTATTGATATTCTGAAACTCGACCTCAGCTCATTGAAATCGGTCAAGGCATTT
GCAGATAACTTCTTAGCACTTAACCTTCCTCTCAACATCTTAATAAACAATGCAGGTATC
ATGTTCTGTCCATTTCAGCTTTCTGAGGATGGAATAGAGATGCAATTTGCAACAAATCAT
CTTGGTCATTTCTACTTGACTAACTTCCTTCTAGACAAAATGAAGGAAACAGCAAAATCT
ACTGGTATTGAAGGTAGAATTGTGAATTTGTCATCAGTAGCTCACCTAGTTTGCCCTCGT
GAAGGAATACGATTCCACAATATCAACGACAAAAACAGTTATCAGGACAAAGTGGCCTAT
GGACAATCCAAATTAGCCAACCTACTACATGCCAACGAGCTAGCTCGCCGCTTGCAGGAA
GAGGGAGCAAATATCACTGTCAATTCAGTTCATCCGGGTCTGATAATGACGAATCTCATG
AGACATTCAGCCTTTTTGATGAGAATCTTAAGGGTTTTCACTTGTTTACTGTGGAAGAAT
GTCCCTCAGGGGGCAGCTACAACTTGCTACGTCGCCCTCCATCCAAGTTTAAAGGGAGTG
ACTGGAAAGTACTTTTCTGATTGCAATGAGTATAAGCCAAGCAAGCTTGCACGAGACGAA
GTGTTAGCTAGGAATCTTTGGGATTTCAGCAACAATCTGATAAATGCATCTCAAAAGATT
ATTGATAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400033283
PEP Infomation

pacid=37477324 transcript=PGSC0003DMT400049292 locus=PGSC0003DMG400019158 ID=PGSC0003DMT400049292.v4.03 annot-version=v4.03
Sequence

MLRLITGRRGASGFGSASTAEEVTDGVDATALTVIITGGASGIGLETTRVLALRKAHVIV
AARNMEAANEAKQRILNENRTARIDILKLDLSSLKSVKAFADNFLALNLPLNILINNAGI
MFCPFQLSEDGIEMQFATNHLGHFYLTNFLLDKMKETAKSTGIEGRIVNLSSVAHLVCPR
EGIRFHNINDKNSYQDKVAYGQSKLANLLHANELARRLQEEGANITVNSVHPGLIMTNLM
RHSAFLMRILRVFTCLLWKNVPQGAATTCYVALHPSLKGVTGKYFSDCNEYKPSKLARDE
VLARNLWDFSNNLINASQKIIDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400049292
Transcript Infomation

pacid=37477324 locus=PGSC0003DMG400019158 ID=PGSC0003DMT400049292.v4.03 annot-version=v4.03
Sequence

ATGTTGAGATTGATAACAGGCAGAAGAGGAGCAAGTGGATTTGGGTCAGCTTCAACTGCT
GAGGAGGTTACTGATGGTGTTGATGCTACCGCTCTCACGGTTATTATTACAGGAGGTGCA
AGCGGCATCGGTTTGGAGACAACACGAGTTTTAGCTCTGAGGAAAGCCCATGTTATTGTT
GCTGCAAGAAATATGGAGGCTGCAAATGAAGCAAAACAACGCATTTTGAACGAAAACAGA
ACTGCACGTATTGATATTCTGAAACTCGACCTCAGCTCATTGAAATCGGTCAAGGCATTT
GCAGATAACTTCTTAGCACTTAACCTTCCTCTCAACATCTTAATAAACAATGCAGGTATC
ATGTTCTGTCCATTTCAGCTTTCTGAGGATGGAATAGAGATGCAATTTGCAACAAATCAT
CTTGGTCATTTCTACTTGACTAACTTCCTTCTAGACAAAATGAAGGAAACAGCAAAATCT
ACTGGTATTGAAGGTAGAATTGTGAATTTGTCATCAGTAGCTCACCTAGTTTGCCCTCGT
GAAGGAATACGATTCCACAATATCAACGACAAAAACAGTTATCAGGACAAAGTGGCCTAT
GGACAATCCAAATTAGCCAACCTACTACATGCCAACGAGCTAGCTCGCCGCTTGCAGGAA
GAGGGAGCAAATATCACTGTCAATTCAGTTCATCCGGGTCTGATAATGACGAATCTCATG
AGACATTCAGCCTTTTTGATGAGAATCTTAAGGGTTTTCACTTGTTTACTGTGGAAGAAT
GTCCCTCAGGGGGCAGCTACAACTTGCTACGTCGCCCTCCATCCAAGTTTAAAGGGAGTG
ACTGGAAAGTACTTTTCTGATTGCAATGAGTATAAGCCAAGCAAGCTTGCACGAGACGAA
GTGTTAGCTAGGAATCTTTGGGATTTCAGCAACAATCTGATAAATGCATCTCAAAAGATT
ATTGATAAGTAG