Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049278
CDS Infomation

pacid=37478530 polypeptide=PGSC0003DMP400033280 locus=PGSC0003DMG400019154 ID=PGSC0003DMT400049278.v4.03 annot-version=v4.03
Sequence

ATGGGAAACGGTATTGGAAAATTGAAGTTTTGTTTTGCAGGAGATGTTGGAGAAATATCC
AAAAGACGCCATGATATTGGCATAGACTTAATTGATAGTCTTGATAAAGGATTAGGCCAT
TCATTTTGTTATATATTGCATGATTCATCATCTAAGAATCAACATTTTCTAGAAGATTCT
TCTTCTTCCGCCACTACCACTATCTCCAGTAACAGCAGCAGCACCAGCCAAACGACGGCG
TTTCGTACTATTTCCGGTGCTTCTATCTCCGCCAACACCTCTACTACGCCGCTGTCCACC
GCCCTCGTCGACGTTTCCAATACTTACATTGAGAAGTCGTCGGCTTTTGAGAGCTCTCAG
TGGTTTTCTTCTTTTCCTCTTCAGCCAATTCCCCGGAGATCAATCCACTCTATATGTTCG
GGCCCGATTCCCCGAGTATCTAACTCGGGCTCGGGCCCGATCGAGAGGGGATTCCTTTCC
GGCCCAATGGAGCGGAGTTTTACTTCTGGCCCGTTGGAGAATCAGTATGATCAGCAGCCA
CAGAGGTACAAACCTGAGTCTAGTAAATGGGATATAGTTAGGAATTTAAAGAAAGTTTTG
TCAATGAATTTGGTTGAGAAGAAGAAGAATAATGGATCTTTGAACAGTTTGTATGAAGAT
GATGAGAATAATGGATCATTTCGAAGTCGAAATGTGCAATGGGCTCAGGGAAAAGCAGGG
GAAGACAGAGTACATGTAGTGATTTCTGAGGAATATGGATGGGTATTTGTTGGGATTTAT
GATGGTTTTAATGGACCTGATGCTACTGATTTTTTATTGAAAAATCTTTATTCGAATGTA
TTCAAAGAACTCAAGGGATTGCTATGGAATGACAAGTTAGAATCCTCCGAAAATCTCATG
TGTAACGAGACAGTTATTGTTCAAAATCAAGAATTTGATCAATCAAAGATTGCAGGTATT
GATCATTTAGATGTGTTGAATGCGTTATCTGAGGCGTTGAGGAGAGCTGAGGAATCATAT
TTGGAGATAACGGACTCGATGGTGAATGAAAATCCCGAGTTAGCCTTAATGGGATCATGT
GTTTTAGTGATGTTGATGAAAGGCAATGATGTTTACTTGATGAATGTTGGAGATAGCAGA
GCAGTTTTGGCTCAAAATCCTGAACCCGATCGTTCCATTGGTAACTTGGGACTGATAAAT
GAGGGGAGTCGAAATAGCATTGATACACTCTACAGAGTTGTATCAGACAGAAAACACAAT
CTTAGTTCTTGTCAACTCACTATGGACCATAGCACATCTGTTAAAGAGGAAGTTCTTAGG
ATTAGAAGTGAACATCCTAGTGATACGTCTGCTATTAAAAATAATAGAGTGAAAGGTTCT
TTGAACGTCACTCGAGCTTTTGGTGCAGGCTTTCTTAAACAGCCTAAATGGAACAATGGA
CTTCTAGGTGTTTTCAGAATAGACTACGTTGGAAATTCACCGTATATTAATTGTATACCA
TCATTATACCACCATAGACTTGGTCCAAGAGACAGATTTCTGATCTTATCATCTGATGGA
CTTTATCAATACTTCACAAATGAAGAAGCAGTCTCTGAAGTTGAGACTTTCATGTCTATA
TTCCCCGAGGGAGATCCCGCGCAACATCTCGTTGAAGAAGTGTTATTTAGAGCTGCAAAG
AAAGCTGGCATGGACTTCCACGAGTTGCTTGATATACCACAAGGAGATCGTAGGAAGTAC
CACGATGATGTTTCAATCATCATCATATCATTTGAAGGTAGGATATGGAGATCATCCGTG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400033280
PEP Infomation

pacid=37478530 transcript=PGSC0003DMT400049278 locus=PGSC0003DMG400019154 ID=PGSC0003DMT400049278.v4.03 annot-version=v4.03
Sequence

MGNGIGKLKFCFAGDVGEISKRRHDIGIDLIDSLDKGLGHSFCYILHDSSSKNQHFLEDS
SSSATTTISSNSSSTSQTTAFRTISGASISANTSTTPLSTALVDVSNTYIEKSSAFESSQ
WFSSFPLQPIPRRSIHSICSGPIPRVSNSGSGPIERGFLSGPMERSFTSGPLENQYDQQP
QRYKPESSKWDIVRNLKKVLSMNLVEKKKNNGSLNSLYEDDENNGSFRSRNVQWAQGKAG
EDRVHVVISEEYGWVFVGIYDGFNGPDATDFLLKNLYSNVFKELKGLLWNDKLESSENLM
CNETVIVQNQEFDQSKIAGIDHLDVLNALSEALRRAEESYLEITDSMVNENPELALMGSC
VLVMLMKGNDVYLMNVGDSRAVLAQNPEPDRSIGNLGLINEGSRNSIDTLYRVVSDRKHN
LSSCQLTMDHSTSVKEEVLRIRSEHPSDTSAIKNNRVKGSLNVTRAFGAGFLKQPKWNNG
LLGVFRIDYVGNSPYINCIPSLYHHRLGPRDRFLILSSDGLYQYFTNEEAVSEVETFMSI
FPEGDPAQHLVEEVLFRAAKKAGMDFHELLDIPQGDRRKYHDDVSIIIISFEGRIWRSSV
*

Transcript Sequence

Transcript ID

PGSC0003DMT400049278
Transcript Infomation

pacid=37478530 locus=PGSC0003DMG400019154 ID=PGSC0003DMT400049278.v4.03 annot-version=v4.03
Sequence

ATGGGAAACGGTATTGGAAAATTGAAGTTTTGTTTTGCAGGAGATGTTGGAGAAATATCC
AAAAGACGCCATGATATTGGCATAGACTTAATTGATAGTCTTGATAAAGGATTAGGCCAT
TCATTTTGTTATATATTGCATGATTCATCATCTAAGAATCAACATTTTCTAGAAGATTCT
TCTTCTTCCGCCACTACCACTATCTCCAGTAACAGCAGCAGCACCAGCCAAACGACGGCG
TTTCGTACTATTTCCGGTGCTTCTATCTCCGCCAACACCTCTACTACGCCGCTGTCCACC
GCCCTCGTCGACGTTTCCAATACTTACATTGAGAAGTCGTCGGCTTTTGAGAGCTCTCAG
TGGTTTTCTTCTTTTCCTCTTCAGCCAATTCCCCGGAGATCAATCCACTCTATATGTTCG
GGCCCGATTCCCCGAGTATCTAACTCGGGCTCGGGCCCGATCGAGAGGGGATTCCTTTCC
GGCCCAATGGAGCGGAGTTTTACTTCTGGCCCGTTGGAGAATCAGTATGATCAGCAGCCA
CAGAGGTACAAACCTGAGTCTAGTAAATGGGATATAGTTAGGAATTTAAAGAAAGTTTTG
TCAATGAATTTGGTTGAGAAGAAGAAGAATAATGGATCTTTGAACAGTTTGTATGAAGAT
GATGAGAATAATGGATCATTTCGAAGTCGAAATGTGCAATGGGCTCAGGGAAAAGCAGGG
GAAGACAGAGTACATGTAGTGATTTCTGAGGAATATGGATGGGTATTTGTTGGGATTTAT
GATGGTTTTAATGGACCTGATGCTACTGATTTTTTATTGAAAAATCTTTATTCGAATGTA
TTCAAAGAACTCAAGGGATTGCTATGGAATGACAAGTTAGAATCCTCCGAAAATCTCATG
TGTAACGAGACAGTTATTGTTCAAAATCAAGAATTTGATCAATCAAAGATTGCAGGTATT
GATCATTTAGATGTGTTGAATGCGTTATCTGAGGCGTTGAGGAGAGCTGAGGAATCATAT
TTGGAGATAACGGACTCGATGGTGAATGAAAATCCCGAGTTAGCCTTAATGGGATCATGT
GTTTTAGTGATGTTGATGAAAGGCAATGATGTTTACTTGATGAATGTTGGAGATAGCAGA
GCAGTTTTGGCTCAAAATCCTGAACCCGATCGTTCCATTGGTAACTTGGGACTGATAAAT
GAGGGGAGTCGAAATAGCATTGATACACTCTACAGAGTTGTATCAGACAGAAAACACAAT
CTTAGTTCTTGTCAACTCACTATGGACCATAGCACATCTGTTAAAGAGGAAGTTCTTAGG
ATTAGAAGTGAACATCCTAGTGATACGTCTGCTATTAAAAATAATAGAGTGAAAGGTTCT
TTGAACGTCACTCGAGCTTTTGGTGCAGGCTTTCTTAAACAGCCTAAATGGAACAATGGA
CTTCTAGGTGTTTTCAGAATAGACTACGTTGGAAATTCACCGTATATTAATTGTATACCA
TCATTATACCACCATAGACTTGGTCCAAGAGACAGATTTCTGATCTTATCATCTGATGGA
CTTTATCAATACTTCACAAATGAAGAAGCAGTCTCTGAAGTTGAGACTTTCATGTCTATA
TTCCCCGAGGGAGATCCCGCGCAACATCTCGTTGAAGAAGTGTTATTTAGAGCTGCAAAG
AAAGCTGGCATGGACTTCCACGAGTTGCTTGATATACCACAAGGAGATCGTAGGAAGTAC
CACGATGATGTTTCAATCATCATCATATCATTTGAAGGTAGGATATGGAGATCATCCGTG
TAA