Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049255
CDS Infomation

pacid=37479495 polypeptide=PGSC0003DMP400033264 locus=PGSC0003DMG401019148 ID=PGSC0003DMT400049255.v4.03 annot-version=v4.03
Sequence

ATGGCAGATCCAGTAATTGGTGCTACAGTTCAAGTTGTGCTTGAGAAACTGCTTTCTCTC
ACTATTGAGAAAGTCAGTAGCTCAAGGGACTGCAACAAACATCTCAGAATGCTCACACAA
AATGTATCTATCATTCAAGCTTTCATTAATGATGCTGAAAGACGACAAGTTGACGATCAC
GCTGTGGAAAAATGGGTGAAAATGCTTGAGATAGTTGCTGAAAATGCTGAAAATGTTTTT
GACGAATTCACATATGAATCTCTCAAAACACAAGTGATGCAGATCCGAAATAGCCCAATG
AGAAAGGTCAGTGATTTCATTTCTCATACAGCTTTTAAGAGTAAAATGTCTCGAAAAATC
AAAAACATCAATGAAGAGTTGAGGGTTATCAATCAGTTAGCCAAAGACCTCGGTCTCCAA
TCACTAATAGTTTCGTCTCAGCAAATACTACCGTTTCGAGAAACAGATTCCTTAGTAGTT
GCTTCGGATGTCGTTGGTAGAGACAACGATGTTGCTGAAATAAAGGAGAAGATGTTGAAC
ATGAGAGACGAAGTTGTTCTGTGCACCATTCCCGTAGTGGGGATGGGAGGTTTAGGGAAA
ACTACTGTAGCTAAGAGAATTTTCAATGATGAAGAGATCGAAAAACATTTTGAGAAGAGA
GTGTGGTTGTGTCTACCTGAAATGTCAGAGACTAAGAGCTTTCTTGAACAGATCCTCCAA
TCATTGACAGAGAGGAAACTTGAGGTCCAGACCAGGGATATAATAGTCAAGAAACTCCGA
GATGAACTAGGTGGAAAACGGTATTTGCTTGTCTTAGATGATTTGTGGCGTGTTGACCTT
CCGGTATGGGATGAGTTTGTGGATAGCTTGAGAGGAGTAAACACTTCTAGAGGAAATTGC
ATTCTCGTGACTACTCGCATGAAACAAGTGGCATCCACTGTAGCGGTAGATGTTCGTGTG
TTGGGAAAGTTAACAGAAGATCATTGTTGGTCCATTTTCAAACAAAGAGCTTTTGTTGAT
GGGGAGGTTCCAGAAGAAATGGTGAGCATGGAAAGCAGGATTGTTGAAATATGTCAAGGT
CTACCGTTGGCTGCAAGTGTGTTGGGAGGCCTTTTACGCAACAAGGAAAGACATGAATGG
CAGGCAATTCTTGATGGCAACCCCCTTATTGCGGGTGAAAATGATAATGGGGAAAATAGC
TTAAGGAAAATCCTAAAACTTAGCTATGATTATTTACCATTTCCACATCTGAAAAAATGC
TTTGCCTACTTTGCAATGTTTCCAAAAGATTTTGTGTTTGGAAAGGACCAACTAATCCAA
CTCTGGATGGCGGAAGGATTTCTTCGTCCATGTCAAGAGACTCCTGTGATGGAAGACGTT
GGGAACAAGTATTTTCAACTTTTGTTGCAATATTCCTTGCTGCAAGATGTTGAGCTAGAT
GAGCACAACAATATAAGATACTGTAAGATGCATGATCTTGTGCATGATTTGGCTGGAGAT
ATTTTAAAATCTAAACTATTTGATCAAAAGAGTATTGGAGGAGAAAATCTTTCTCAAGCC
CGATACTTTGGATGGGACTCACCAAGTGATCAAATTGATATGATAAATGAGCCAGGACGT
ATATGCACATTGTTCTCGAGAAACAATATATCCAAAGATGTTCTATTGAGCTTTCAGTTC
TTGAGAGTTCTAAATTTTTCCAGGTCAGGCATCAAGGGGTTGACAGCCTCAATTGGCAAA
CTAATATACTTGAGATATCTTGATCTCTCCAATACTAATATCAAAGCCTTGCCTAACTCC
ATTTGCAAGCTCTACAATTTGCAAACATTTAGGGTAAGTAACTGCTTTTTACTAGAGGAG
CTTCCAGATGAAATGGCGAATATGATAAGTTTGAGACACATATATTACAGCAATGATTTC
AGATCAGACTCTAGAAAATGGTGTTTCGGCAATCAGAACTTTCAGATGCCACTTAAGATA
GGACAATTGACTTGTCTTCAAACACTACAGTTTTTCAAGGTAGGTTCAGAGAAAGGTCGT
CGAATAGAAGAATTAGGTTGTTTGAAGAACCTTAGAGGTGAATTGATGATTAGAGATCTT
CAATTGGTCTGTAATAGAGAAGAAGCTGTAAAAGCATGTCTATGGGAGAAACCAAATATC
TCCAAGTTGGCATATTTATGGTCCCATGATGAATCAGAAGACTATGAGGTCAATGATGAG
TATGTTTTGGATGGTCTTCAACCGCATACTAACTTGAAAAATTTAGTGGTAGTGAACTAT
TTGGGGACTAGATTTCCGTCATGGTTCAGTGAAGAATTGTTACCAAATTTGGTCGAGTTG
AAATTAAGTGGTTGCAGAAAGTGCAAGGAAATTCCATCGCTTGGCCAACTTAAACTACTT
CGGCATCTTGAGCTGATAGGATTCCATGAGTTGGAATGTATTGGACCTACATTTTATGGT
GTTGAAGTTGACAATAATGGATCAAGCAATAATAACACCAATATCCAAGTGTTCCCGTTA
CTCAAAGAACTAGTATTGTGGAATATGCCTAGACTTACTGAGTGGAAGGAAGTGCAGTTG
TTATCAACAGGAAATGATGGTAGCGACAGAGTTGGAGTAAGAATGTTTCCTGGGCTGGAG
AAGTTGAGGATTATTAACTGTCCACTGTTAAAAAGTATACCGAATCAATTTGAAATGCTG
CGTGAATTAAGCATCGATGGGAATCAGATAATTGAATTTGGAATTGAGGTTCTTCTCTTG
AAACATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033264
PEP Infomation

pacid=37479495 transcript=PGSC0003DMT400049255 locus=PGSC0003DMG401019148 ID=PGSC0003DMT400049255.v4.03 annot-version=v4.03
Sequence

MADPVIGATVQVVLEKLLSLTIEKVSSSRDCNKHLRMLTQNVSIIQAFINDAERRQVDDH
AVEKWVKMLEIVAENAENVFDEFTYESLKTQVMQIRNSPMRKVSDFISHTAFKSKMSRKI
KNINEELRVINQLAKDLGLQSLIVSSQQILPFRETDSLVVASDVVGRDNDVAEIKEKMLN
MRDEVVLCTIPVVGMGGLGKTTVAKRIFNDEEIEKHFEKRVWLCLPEMSETKSFLEQILQ
SLTERKLEVQTRDIIVKKLRDELGGKRYLLVLDDLWRVDLPVWDEFVDSLRGVNTSRGNC
ILVTTRMKQVASTVAVDVRVLGKLTEDHCWSIFKQRAFVDGEVPEEMVSMESRIVEICQG
LPLAASVLGGLLRNKERHEWQAILDGNPLIAGENDNGENSLRKILKLSYDYLPFPHLKKC
FAYFAMFPKDFVFGKDQLIQLWMAEGFLRPCQETPVMEDVGNKYFQLLLQYSLLQDVELD
EHNNIRYCKMHDLVHDLAGDILKSKLFDQKSIGGENLSQARYFGWDSPSDQIDMINEPGR
ICTLFSRNNISKDVLLSFQFLRVLNFSRSGIKGLTASIGKLIYLRYLDLSNTNIKALPNS
ICKLYNLQTFRVSNCFLLEELPDEMANMISLRHIYYSNDFRSDSRKWCFGNQNFQMPLKI
GQLTCLQTLQFFKVGSEKGRRIEELGCLKNLRGELMIRDLQLVCNREEAVKACLWEKPNI
SKLAYLWSHDESEDYEVNDEYVLDGLQPHTNLKNLVVVNYLGTRFPSWFSEELLPNLVEL
KLSGCRKCKEIPSLGQLKLLRHLELIGFHELECIGPTFYGVEVDNNGSSNNNTNIQVFPL
LKELVLWNMPRLTEWKEVQLLSTGNDGSDRVGVRMFPGLEKLRIINCPLLKSIPNQFEML
RELSIDGNQIIEFGIEVLLLKH*

Transcript Sequence

Transcript ID

PGSC0003DMT400049255
Transcript Infomation

pacid=37479495 locus=PGSC0003DMG401019148 ID=PGSC0003DMT400049255.v4.03 annot-version=v4.03
Sequence

ATGGCAGATCCAGTAATTGGTGCTACAGTTCAAGTTGTGCTTGAGAAACTGCTTTCTCTC
ACTATTGAGAAAGTCAGTAGCTCAAGGGACTGCAACAAACATCTCAGAATGCTCACACAA
AATGTATCTATCATTCAAGCTTTCATTAATGATGCTGAAAGACGACAAGTTGACGATCAC
GCTGTGGAAAAATGGGTGAAAATGCTTGAGATAGTTGCTGAAAATGCTGAAAATGTTTTT
GACGAATTCACATATGAATCTCTCAAAACACAAGTGATGCAGATCCGAAATAGCCCAATG
AGAAAGGTCAGTGATTTCATTTCTCATACAGCTTTTAAGAGTAAAATGTCTCGAAAAATC
AAAAACATCAATGAAGAGTTGAGGGTTATCAATCAGTTAGCCAAAGACCTCGGTCTCCAA
TCACTAATAGTTTCGTCTCAGCAAATACTACCGTTTCGAGAAACAGATTCCTTAGTAGTT
GCTTCGGATGTCGTTGGTAGAGACAACGATGTTGCTGAAATAAAGGAGAAGATGTTGAAC
ATGAGAGACGAAGTTGTTCTGTGCACCATTCCCGTAGTGGGGATGGGAGGTTTAGGGAAA
ACTACTGTAGCTAAGAGAATTTTCAATGATGAAGAGATCGAAAAACATTTTGAGAAGAGA
GTGTGGTTGTGTCTACCTGAAATGTCAGAGACTAAGAGCTTTCTTGAACAGATCCTCCAA
TCATTGACAGAGAGGAAACTTGAGGTCCAGACCAGGGATATAATAGTCAAGAAACTCCGA
GATGAACTAGGTGGAAAACGGTATTTGCTTGTCTTAGATGATTTGTGGCGTGTTGACCTT
CCGGTATGGGATGAGTTTGTGGATAGCTTGAGAGGAGTAAACACTTCTAGAGGAAATTGC
ATTCTCGTGACTACTCGCATGAAACAAGTGGCATCCACTGTAGCGGTAGATGTTCGTGTG
TTGGGAAAGTTAACAGAAGATCATTGTTGGTCCATTTTCAAACAAAGAGCTTTTGTTGAT
GGGGAGGTTCCAGAAGAAATGGTGAGCATGGAAAGCAGGATTGTTGAAATATGTCAAGGT
CTACCGTTGGCTGCAAGTGTGTTGGGAGGCCTTTTACGCAACAAGGAAAGACATGAATGG
CAGGCAATTCTTGATGGCAACCCCCTTATTGCGGGTGAAAATGATAATGGGGAAAATAGC
TTAAGGAAAATCCTAAAACTTAGCTATGATTATTTACCATTTCCACATCTGAAAAAATGC
TTTGCCTACTTTGCAATGTTTCCAAAAGATTTTGTGTTTGGAAAGGACCAACTAATCCAA
CTCTGGATGGCGGAAGGATTTCTTCGTCCATGTCAAGAGACTCCTGTGATGGAAGACGTT
GGGAACAAGTATTTTCAACTTTTGTTGCAATATTCCTTGCTGCAAGATGTTGAGCTAGAT
GAGCACAACAATATAAGATACTGTAAGATGCATGATCTTGTGCATGATTTGGCTGGAGAT
ATTTTAAAATCTAAACTATTTGATCAAAAGAGTATTGGAGGAGAAAATCTTTCTCAAGCC
CGATACTTTGGATGGGACTCACCAAGTGATCAAATTGATATGATAAATGAGCCAGGACGT
ATATGCACATTGTTCTCGAGAAACAATATATCCAAAGATGTTCTATTGAGCTTTCAGTTC
TTGAGAGTTCTAAATTTTTCCAGGTCAGGCATCAAGGGGTTGACAGCCTCAATTGGCAAA
CTAATATACTTGAGATATCTTGATCTCTCCAATACTAATATCAAAGCCTTGCCTAACTCC
ATTTGCAAGCTCTACAATTTGCAAACATTTAGGGTAAGTAACTGCTTTTTACTAGAGGAG
CTTCCAGATGAAATGGCGAATATGATAAGTTTGAGACACATATATTACAGCAATGATTTC
AGATCAGACTCTAGAAAATGGTGTTTCGGCAATCAGAACTTTCAGATGCCACTTAAGATA
GGACAATTGACTTGTCTTCAAACACTACAGTTTTTCAAGGTAGGTTCAGAGAAAGGTCGT
CGAATAGAAGAATTAGGTTGTTTGAAGAACCTTAGAGGTGAATTGATGATTAGAGATCTT
CAATTGGTCTGTAATAGAGAAGAAGCTGTAAAAGCATGTCTATGGGAGAAACCAAATATC
TCCAAGTTGGCATATTTATGGTCCCATGATGAATCAGAAGACTATGAGGTCAATGATGAG
TATGTTTTGGATGGTCTTCAACCGCATACTAACTTGAAAAATTTAGTGGTAGTGAACTAT
TTGGGGACTAGATTTCCGTCATGGTTCAGTGAAGAATTGTTACCAAATTTGGTCGAGTTG
AAATTAAGTGGTTGCAGAAAGTGCAAGGAAATTCCATCGCTTGGCCAACTTAAACTACTT
CGGCATCTTGAGCTGATAGGATTCCATGAGTTGGAATGTATTGGACCTACATTTTATGGT
GTTGAAGTTGACAATAATGGATCAAGCAATAATAACACCAATATCCAAGTGTTCCCGTTA
CTCAAAGAACTAGTATTGTGGAATATGCCTAGACTTACTGAGTGGAAGGAAGTGCAGTTG
TTATCAACAGGAAATGATGGTAGCGACAGAGTTGGAGTAAGAATGTTTCCTGGGCTGGAG
AAGTTGAGGATTATTAACTGTCCACTGTTAAAAAGTATACCGAATCAATTTGAAATGCTG
CGTGAATTAAGCATCGATGGGAATCAGATAATTGAATTTGGAATTGAGGTTCTTCTCTTG
AAACATTAA