Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049234
CDS Infomation

pacid=37480139 polypeptide=PGSC0003DMP400033252 locus=PGSC0003DMG400019141 ID=PGSC0003DMT400049234.v4.03 annot-version=v4.03
Sequence

ATGACGACTTCGAACTTTCTATTCCTCTTCTTCTTCATCTTCCTTATCCATTTCTTCACC
GTTCCCTCACGTGCCGACCTCCCCGGCACGTGGGAACTCCTTGTCCCTGACGCCGGAATT
GCTTCCATGCACACCGCCGTCACCCATTACAACACCGTTGTACTCCTCGACCGCACCGAC
ATCGGTCCTTCCCGGAAAAGACTCCCTCCCCACCATTGCCGTAACGATCCCAATGACCCC
ATTTTGAAAAAAGACTGTTATGCTCACTCTGTTCTTCTTGATTTGGAAACGAATTCAGTT
CGACCTCTTATGATCCTCACCGACACTTGGTGTTCTTCTGGTCAATTTCTCCCCGACGGT
ACGCTTCTTCATACCGGCGGTGATCTTGATGGGTTCCGGAAATTCAGGAAATTCACTCCG
TGTGAATCTTCTAGCTCTGTTTGTGATTGGGAAGAACTTCAAAATGTTCAGCTTTCAGAA
GGAAGATGGTATTCCACTAATCAGATATTACCCACCGGAGAAATCATAATTGTCGGCGGC
CGTGCTGCTAGTAGTGTCGAGTATTTTCCACCGAGAGAAACCGGAGCGGTTGAATTCCCT
TTCTTAACTCAAGCTGAAGATAAACAACATGATAATCTTTATCCTTATGTTCATTTGCTA
CCCAATGGACATCTCTTCATTTTCGCCAACAATAAAGCGGTTATGTATGATTTTACGGCG
AATAAAATAGTAAGAGATTACCCAATACTTGACGGTGGTCCAAGAAACTACCCATCAGCA
GGATCATCAGCTATGTTGGCGCTAACAGAGGATTATTCTTCTGCCACCATTGTTATTTGT
GGTGGAGCTCAATTTGGGGCTTATTTACAGAGGAGCACAGATACCCCTGCACATGGGAGT
TGCGGTAGAATTGAAGCGACCGGAGAAAACCCAGTTTGGGAAATGGAAGATATGCCCTTT
GCGAGAATCATGGGTGATATGGTGATGTTACCAACCGGAGAAATTCTTATCATTAATGGA
GCTCAAGCAGGAACTCAAGGTTTCGAAATGGCTTCAAATCCATGTTTAAACCCAGTTTTA
TACAGACCAAACGAACCCTTAGGACTCCGATTCATGACTTTGAATCCCGGTACAGTTCCA
AGAATGTATCACTCCACAGCCAATTTGCTTCCGGACGGTCGGATCTTACTTGCCGGAAGC
AACCCACATTTTTTTTACAAGTTCGCGGTGGAATTTCCGACGGAATTAAGGATCGAAGCG
TTTTCTCCGGAGTATTTATCAGCAGACAGAGCAAATCTCCGACCAGTAATAGTGGAATCG
CCGGAAAAGCTCAAATACGGTGAGGATTTTGGGGTGGCGGTGACGGTGGAACTGCCGGTG
GTTGGGATTATTGAAGTGAATTTAGCGAGTGCTCCATTTTCAACACATTCGTTTTCACAA
GGGCAAAGGCTTGTGAAATTGAAAGTAACGAGCGCGATTCCCGATGATGCCGGTAAATAT
AGGATCGGATGTACAGCACCGCCGGACGGGAAGGTGGCGCCGCCGGGATATTACATGGTA
TTTGCTGTAAACCAAGGAGTGCCAAGTGTGGCACGATGGGTCCAGCTAGTTGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400033252
PEP Infomation

pacid=37480139 transcript=PGSC0003DMT400049234 locus=PGSC0003DMG400019141 ID=PGSC0003DMT400049234.v4.03 annot-version=v4.03
Sequence

MTTSNFLFLFFFIFLIHFFTVPSRADLPGTWELLVPDAGIASMHTAVTHYNTVVLLDRTD
IGPSRKRLPPHHCRNDPNDPILKKDCYAHSVLLDLETNSVRPLMILTDTWCSSGQFLPDG
TLLHTGGDLDGFRKFRKFTPCESSSSVCDWEELQNVQLSEGRWYSTNQILPTGEIIIVGG
RAASSVEYFPPRETGAVEFPFLTQAEDKQHDNLYPYVHLLPNGHLFIFANNKAVMYDFTA
NKIVRDYPILDGGPRNYPSAGSSAMLALTEDYSSATIVICGGAQFGAYLQRSTDTPAHGS
CGRIEATGENPVWEMEDMPFARIMGDMVMLPTGEILIINGAQAGTQGFEMASNPCLNPVL
YRPNEPLGLRFMTLNPGTVPRMYHSTANLLPDGRILLAGSNPHFFYKFAVEFPTELRIEA
FSPEYLSADRANLRPVIVESPEKLKYGEDFGVAVTVELPVVGIIEVNLASAPFSTHSFSQ
GQRLVKLKVTSAIPDDAGKYRIGCTAPPDGKVAPPGYYMVFAVNQGVPSVARWVQLVV*

Transcript Sequence

Transcript ID

PGSC0003DMT400049234
Transcript Infomation

pacid=37480139 locus=PGSC0003DMG400019141 ID=PGSC0003DMT400049234.v4.03 annot-version=v4.03
Sequence

ATGACGACTTCGAACTTTCTATTCCTCTTCTTCTTCATCTTCCTTATCCATTTCTTCACC
GTTCCCTCACGTGCCGACCTCCCCGGCACGTGGGAACTCCTTGTCCCTGACGCCGGAATT
GCTTCCATGCACACCGCCGTCACCCATTACAACACCGTTGTACTCCTCGACCGCACCGAC
ATCGGTCCTTCCCGGAAAAGACTCCCTCCCCACCATTGCCGTAACGATCCCAATGACCCC
ATTTTGAAAAAAGACTGTTATGCTCACTCTGTTCTTCTTGATTTGGAAACGAATTCAGTT
CGACCTCTTATGATCCTCACCGACACTTGGTGTTCTTCTGGTCAATTTCTCCCCGACGGT
ACGCTTCTTCATACCGGCGGTGATCTTGATGGGTTCCGGAAATTCAGGAAATTCACTCCG
TGTGAATCTTCTAGCTCTGTTTGTGATTGGGAAGAACTTCAAAATGTTCAGCTTTCAGAA
GGAAGATGGTATTCCACTAATCAGATATTACCCACCGGAGAAATCATAATTGTCGGCGGC
CGTGCTGCTAGTAGTGTCGAGTATTTTCCACCGAGAGAAACCGGAGCGGTTGAATTCCCT
TTCTTAACTCAAGCTGAAGATAAACAACATGATAATCTTTATCCTTATGTTCATTTGCTA
CCCAATGGACATCTCTTCATTTTCGCCAACAATAAAGCGGTTATGTATGATTTTACGGCG
AATAAAATAGTAAGAGATTACCCAATACTTGACGGTGGTCCAAGAAACTACCCATCAGCA
GGATCATCAGCTATGTTGGCGCTAACAGAGGATTATTCTTCTGCCACCATTGTTATTTGT
GGTGGAGCTCAATTTGGGGCTTATTTACAGAGGAGCACAGATACCCCTGCACATGGGAGT
TGCGGTAGAATTGAAGCGACCGGAGAAAACCCAGTTTGGGAAATGGAAGATATGCCCTTT
GCGAGAATCATGGGTGATATGGTGATGTTACCAACCGGAGAAATTCTTATCATTAATGGA
GCTCAAGCAGGAACTCAAGGTTTCGAAATGGCTTCAAATCCATGTTTAAACCCAGTTTTA
TACAGACCAAACGAACCCTTAGGACTCCGATTCATGACTTTGAATCCCGGTACAGTTCCA
AGAATGTATCACTCCACAGCCAATTTGCTTCCGGACGGTCGGATCTTACTTGCCGGAAGC
AACCCACATTTTTTTTACAAGTTCGCGGTGGAATTTCCGACGGAATTAAGGATCGAAGCG
TTTTCTCCGGAGTATTTATCAGCAGACAGAGCAAATCTCCGACCAGTAATAGTGGAATCG
CCGGAAAAGCTCAAATACGGTGAGGATTTTGGGGTGGCGGTGACGGTGGAACTGCCGGTG
GTTGGGATTATTGAAGTGAATTTAGCGAGTGCTCCATTTTCAACACATTCGTTTTCACAA
GGGCAAAGGCTTGTGAAATTGAAAGTAACGAGCGCGATTCCCGATGATGCCGGTAAATAT
AGGATCGGATGTACAGCACCGCCGGACGGGAAGGTGGCGCCGCCGGGATATTACATGGTA
TTTGCTGTAAACCAAGGAGTGCCAAGTGTGGCACGATGGGTCCAGCTAGTTGTTTGA