Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049230
CDS Infomation

pacid=37479916 polypeptide=PGSC0003DMP400033250 locus=PGSC0003DMG400019139 ID=PGSC0003DMT400049230.v4.03 annot-version=v4.03
Sequence

ATGGATAGACTTGAGTCACACCAGGACAAAAGGAGAGATTTTTCTCTGGAATTTCAGCCA
CAGCTCAAGCATTTTATTCAACTAGACCCTTGTGTAAGTTCCAAGAAAGAGAACCATTTT
TCTGTGTTGAAGTTTAAGGTTTCAAAATCCATCAAGAATTTGTATCAAAAAGCTAAAGTG
TCAAAGGGTTTTGGAAGTAAAAGGTTTGATTTTGATGGCATTGTAATGACTAACTCTGTT
TATTGTGGTTCTTCTCCTGGTTTTCTTGATGATAAAATGGAGGTTTTGTCTGATAAGAGT
GATGGGGCAGCAGGGGTAATGGAGGGTTATGGGGAAAATGCTGGAAAAATTGAGTCTTTG
GATGAGAAAATTGGCATAGAGAGTAGTTCAAGTTCTGGTTTTTTAGTGTCAGAGGAAAAT
GTGAATGAAGAAAATAGTGGGTCTGAGGATTCTTGTTCTCCATCTTCAATTGCTTGGCAT
ATTCAGGATGATGAGGTGCAGCATTGTGCAAATTCTGATGTTTCCGAAGAAGTAGAGAAG
CCCTTTGTAGATAAAAGGAAGTTGGAGAAACAAGGGTCTTGTTTGTCTGAGATTGAAATG
ATGAAGGAGAGATTCTCAAAGTTGCTGCTGGGAGAAGACATGTCTGGTTGTGGAAATGGG
GTTTGCACAGCACTAGCAATTTCTAATGCTATCACTAATCTATGTGCTACTCTTTTTGGG
CAAATTTGGAGATTAGAACCTTTAGCTCCAGAGAAAAAGTTAATGTGGCGGAGAGAAATG
GAATGGCTTCTCTGTGTTAGTGATCACATTGTAGAACTCATACCCTCTTGGCAGACATTT
CCTGATGGCAGCAAACTTGAGGTTATGACTTCTAGGCCACGGTCAGACCTTTACGTCAAT
CTTCCAGCTCTCCGTAAACTGGACAATATGCTCCTTGAGATATTAGACAGTTTCCAAAGC
ACAGAATTCTGGTATGTTGACCAAGGAATCTTAGCTCCAGAATCCGATGGGTCGTCTTCA
TTCAGAAATCCTCTCCCTCGTCAAGAAGAGAAATGGTGGCTACCGGTTCCTAGAGTCCCC
CCTGGTGGTCTCAGTGAAAATGCAAGAAGGCAGTTGCAGCACAAACGTGATTGCACAAAC
CAAATCCTGAAAGCTGCAATGGCGATTAACAGCAACAGCTTAGCTGAAATGGAGGTGCCT
GAATCATATTTTGAAGGCCTTCCTAAGAACGGAAAAGCTAGCTTAGGTGATCTCATCCAC
CGATATATTACTTCAGACCAATTTTCACCTGAATGTTTGCTTGACTGCCTTGATTTGTCT
TCTGAGCATCAAGCATTTGAGATAGCAAACCGAGTGGAGTCTTCAATTTATGTGTGGCGC
AGAAGAGTTCACTCAAAACCTTTTGGAAGTACTCACAGGTCCAATTCAAAATCCTCATGG
GAAATGGTTAAGGATTTGATGGTTGATGGCGATAAGAGGGAGTTACTTGCTGATAGAGCT
GAAAGCCTTTTGCTTTGCTTAAAGCAAAGGTTTCCTGGTCTTCCACAGACAACCTTAGAC
ATGAGCAAAATTCAATATAACAAGGATGTTGGCAAATCTATTTTGGAGAGCTACTCGAGA
GTGCTTGAAAGCCTGGCATTCAATATTATTGCACGCGTTGATGACCTTCTTTATGCGGAT
GATTTGAATAAGCACTCGGATCAATTTGTGCCAATCTCCAAAGTCGGTATCATTGCACAT
AAGAGCATGGGGACTCCTCTCTCAGTACCTGTCAACGGCACCCCATATAAAACAGCTTTT
ACCACACCAAGCTTCTCCCCTTCCCAACATATTAGTCCTACAAAGGGAGAAAGATCAAAA
ATGTTTGAAGGCAGCAAGCTTTCTACTCGAGGCTTTGGTGTGAAAAAGGTTTTAACTGAT
TATTTGAGCATCGATTCAAAAGGAAAGGACGATTTCAAACGATCAGATTCATGTTCAAGC
ACATCTCAAGATGTTTCAGCAACTGCGTCCACACGGTCTTCAGAATGTTCAAGAGAAGTT
GGCAGCCCATTGACACATGACTCAGATGCAAAAGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400033250
PEP Infomation

pacid=37479916 transcript=PGSC0003DMT400049230 locus=PGSC0003DMG400019139 ID=PGSC0003DMT400049230.v4.03 annot-version=v4.03
Sequence

MDRLESHQDKRRDFSLEFQPQLKHFIQLDPCVSSKKENHFSVLKFKVSKSIKNLYQKAKV
SKGFGSKRFDFDGIVMTNSVYCGSSPGFLDDKMEVLSDKSDGAAGVMEGYGENAGKIESL
DEKIGIESSSSSGFLVSEENVNEENSGSEDSCSPSSIAWHIQDDEVQHCANSDVSEEVEK
PFVDKRKLEKQGSCLSEIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATLFG
QIWRLEPLAPEKKLMWRREMEWLLCVSDHIVELIPSWQTFPDGSKLEVMTSRPRSDLYVN
LPALRKLDNMLLEILDSFQSTEFWYVDQGILAPESDGSSSFRNPLPRQEEKWWLPVPRVP
PGGLSENARRQLQHKRDCTNQILKAAMAINSNSLAEMEVPESYFEGLPKNGKASLGDLIH
RYITSDQFSPECLLDCLDLSSEHQAFEIANRVESSIYVWRRRVHSKPFGSTHRSNSKSSW
EMVKDLMVDGDKRELLADRAESLLLCLKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSR
VLESLAFNIIARVDDLLYADDLNKHSDQFVPISKVGIIAHKSMGTPLSVPVNGTPYKTAF
TTPSFSPSQHISPTKGERSKMFEGSKLSTRGFGVKKVLTDYLSIDSKGKDDFKRSDSCSS
TSQDVSATASTRSSECSREVGSPLTHDSDAKE*

Transcript Sequence

Transcript ID

PGSC0003DMT400049230
Transcript Infomation

pacid=37479916 locus=PGSC0003DMG400019139 ID=PGSC0003DMT400049230.v4.03 annot-version=v4.03
Sequence

ATGGATAGACTTGAGTCACACCAGGACAAAAGGAGAGATTTTTCTCTGGAATTTCAGCCA
CAGCTCAAGCATTTTATTCAACTAGACCCTTGTGTAAGTTCCAAGAAAGAGAACCATTTT
TCTGTGTTGAAGTTTAAGGTTTCAAAATCCATCAAGAATTTGTATCAAAAAGCTAAAGTG
TCAAAGGGTTTTGGAAGTAAAAGGTTTGATTTTGATGGCATTGTAATGACTAACTCTGTT
TATTGTGGTTCTTCTCCTGGTTTTCTTGATGATAAAATGGAGGTTTTGTCTGATAAGAGT
GATGGGGCAGCAGGGGTAATGGAGGGTTATGGGGAAAATGCTGGAAAAATTGAGTCTTTG
GATGAGAAAATTGGCATAGAGAGTAGTTCAAGTTCTGGTTTTTTAGTGTCAGAGGAAAAT
GTGAATGAAGAAAATAGTGGGTCTGAGGATTCTTGTTCTCCATCTTCAATTGCTTGGCAT
ATTCAGGATGATGAGGTGCAGCATTGTGCAAATTCTGATGTTTCCGAAGAAGTAGAGAAG
CCCTTTGTAGATAAAAGGAAGTTGGAGAAACAAGGGTCTTGTTTGTCTGAGATTGAAATG
ATGAAGGAGAGATTCTCAAAGTTGCTGCTGGGAGAAGACATGTCTGGTTGTGGAAATGGG
GTTTGCACAGCACTAGCAATTTCTAATGCTATCACTAATCTATGTGCTACTCTTTTTGGG
CAAATTTGGAGATTAGAACCTTTAGCTCCAGAGAAAAAGTTAATGTGGCGGAGAGAAATG
GAATGGCTTCTCTGTGTTAGTGATCACATTGTAGAACTCATACCCTCTTGGCAGACATTT
CCTGATGGCAGCAAACTTGAGGTTATGACTTCTAGGCCACGGTCAGACCTTTACGTCAAT
CTTCCAGCTCTCCGTAAACTGGACAATATGCTCCTTGAGATATTAGACAGTTTCCAAAGC
ACAGAATTCTGGTATGTTGACCAAGGAATCTTAGCTCCAGAATCCGATGGGTCGTCTTCA
TTCAGAAATCCTCTCCCTCGTCAAGAAGAGAAATGGTGGCTACCGGTTCCTAGAGTCCCC
CCTGGTGGTCTCAGTGAAAATGCAAGAAGGCAGTTGCAGCACAAACGTGATTGCACAAAC
CAAATCCTGAAAGCTGCAATGGCGATTAACAGCAACAGCTTAGCTGAAATGGAGGTGCCT
GAATCATATTTTGAAGGCCTTCCTAAGAACGGAAAAGCTAGCTTAGGTGATCTCATCCAC
CGATATATTACTTCAGACCAATTTTCACCTGAATGTTTGCTTGACTGCCTTGATTTGTCT
TCTGAGCATCAAGCATTTGAGATAGCAAACCGAGTGGAGTCTTCAATTTATGTGTGGCGC
AGAAGAGTTCACTCAAAACCTTTTGGAAGTACTCACAGGTCCAATTCAAAATCCTCATGG
GAAATGGTTAAGGATTTGATGGTTGATGGCGATAAGAGGGAGTTACTTGCTGATAGAGCT
GAAAGCCTTTTGCTTTGCTTAAAGCAAAGGTTTCCTGGTCTTCCACAGACAACCTTAGAC
ATGAGCAAAATTCAATATAACAAGGATGTTGGCAAATCTATTTTGGAGAGCTACTCGAGA
GTGCTTGAAAGCCTGGCATTCAATATTATTGCACGCGTTGATGACCTTCTTTATGCGGAT
GATTTGAATAAGCACTCGGATCAATTTGTGCCAATCTCCAAAGTCGGTATCATTGCACAT
AAGAGCATGGGGACTCCTCTCTCAGTACCTGTCAACGGCACCCCATATAAAACAGCTTTT
ACCACACCAAGCTTCTCCCCTTCCCAACATATTAGTCCTACAAAGGGAGAAAGATCAAAA
ATGTTTGAAGGCAGCAAGCTTTCTACTCGAGGCTTTGGTGTGAAAAAGGTTTTAACTGAT
TATTTGAGCATCGATTCAAAAGGAAAGGACGATTTCAAACGATCAGATTCATGTTCAAGC
ACATCTCAAGATGTTTCAGCAACTGCGTCCACACGGTCTTCAGAATGTTCAAGAGAAGTT
GGCAGCCCATTGACACATGACTCAGATGCAAAAGAATAA