Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049166
CDS Infomation

pacid=37443208 polypeptide=PGSC0003DMP400033205 locus=PGSC0003DMG400019111 ID=PGSC0003DMT400049166.v4.03 annot-version=v4.03
Sequence

ATGGAAGTTACTAAAGTTCTTCACATGAATGGAGGAATCAGAAACTCTAGCTATGCAAAA
AACTCTTTACTTCAGCAAAAGGTGATTCTCATGACAAAGTCAATAACAAATAAAGTTATA
TCTACTCTCTACAACAACCTTTCCCCAGGAGAAACTATACGTATTGCGGATTTAGGTTGT
TCCTCTGGACCGAACACTTTCTTGACAATCTCTCAACTCATTCAAACTATTCATGAAGAA
TGCAAAAGCAATAGCCAACAACAATCCCCGGAAATTCATGTTTTCCTCAATGATCTTCCT
AGCAATGATTTTAACTCCATTTTTCGATCGTTGCCAACGTTCTATGAAGATTTGAGGAAA
CAAAATATGGGAGGAGATGGATTATTTGTGACAGGAGTTGCTGGTTCATTTTATACTAGA
CTTTTTCCTTCTAAGACTTTGCATTTTGTTCACTCCTCTTATAGTCTCCACTGGCTTTCT
CAAGTACCTGATGGAATAGAAAGTAACAAAGGAAATATTTATGTGGCAAGTACAAGTCCG
CCAAGTGTGGTTAAAGCGTATTATGAGCAATATGAAAGAGATTTTGTAAATTTTCTAAAG
TATCGCTCGAAAGAATTGGCAGATGGTGGATGTATGATATTAACCATATTGGGCAAAAAA
AATGAAGACCGCTTTAGTAAAGGAGCATGCTACCTATTAGAGCCTATGGCGAGGGCTCTT
AGAGAGTTGGTTGTAGAGGGATCAATAGAAGAAGAGAAAGTGTACACATTCAACATTCCT
GCATACTATCCATCTCTTAGAGAAGTAATGTATATAGTTGATAAGGAGGGATCTTTCACC
ATTGATATCTTGAAAACTTGTGAACTCCATAAAGATGATTTTGATGAAAATATGGCACAA
TGTGTGAGAGCTTTCACTGAGCCTTTGCTTGTTAGCCATTTTGGTGATAATGAAATATTG
ATAGATCAAGTGTTCCACAAGTGTAGGGAGATCTATGTCAATTTCATGACTATAGAGAAG
ACCACATTCACAAATGTTATTGTCTCTTTGATTAAAAGGAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400033205
PEP Infomation

pacid=37443208 transcript=PGSC0003DMT400049166 locus=PGSC0003DMG400019111 ID=PGSC0003DMT400049166.v4.03 annot-version=v4.03
Sequence

MEVTKVLHMNGGIRNSSYAKNSLLQQKVILMTKSITNKVISTLYNNLSPGETIRIADLGC
SSGPNTFLTISQLIQTIHEECKSNSQQQSPEIHVFLNDLPSNDFNSIFRSLPTFYEDLRK
QNMGGDGLFVTGVAGSFYTRLFPSKTLHFVHSSYSLHWLSQVPDGIESNKGNIYVASTSP
PSVVKAYYEQYERDFVNFLKYRSKELADGGCMILTILGKKNEDRFSKGACYLLEPMARAL
RELVVEGSIEEEKVYTFNIPAYYPSLREVMYIVDKEGSFTIDILKTCELHKDDFDENMAQ
CVRAFTEPLLVSHFGDNEILIDQVFHKCREIYVNFMTIEKTTFTNVIVSLIKRN*

Transcript Sequence

Transcript ID

PGSC0003DMT400049166
Transcript Infomation

pacid=37443208 locus=PGSC0003DMG400019111 ID=PGSC0003DMT400049166.v4.03 annot-version=v4.03
Sequence

ATGGAAGTTACTAAAGTTCTTCACATGAATGGAGGAATCAGAAACTCTAGCTATGCAAAA
AACTCTTTACTTCAGCAAAAGGTGATTCTCATGACAAAGTCAATAACAAATAAAGTTATA
TCTACTCTCTACAACAACCTTTCCCCAGGAGAAACTATACGTATTGCGGATTTAGGTTGT
TCCTCTGGACCGAACACTTTCTTGACAATCTCTCAACTCATTCAAACTATTCATGAAGAA
TGCAAAAGCAATAGCCAACAACAATCCCCGGAAATTCATGTTTTCCTCAATGATCTTCCT
AGCAATGATTTTAACTCCATTTTTCGATCGTTGCCAACGTTCTATGAAGATTTGAGGAAA
CAAAATATGGGAGGAGATGGATTATTTGTGACAGGAGTTGCTGGTTCATTTTATACTAGA
CTTTTTCCTTCTAAGACTTTGCATTTTGTTCACTCCTCTTATAGTCTCCACTGGCTTTCT
CAAGTACCTGATGGAATAGAAAGTAACAAAGGAAATATTTATGTGGCAAGTACAAGTCCG
CCAAGTGTGGTTAAAGCGTATTATGAGCAATATGAAAGAGATTTTGTAAATTTTCTAAAG
TATCGCTCGAAAGAATTGGCAGATGGTGGATGTATGATATTAACCATATTGGGCAAAAAA
AATGAAGACCGCTTTAGTAAAGGAGCATGCTACCTATTAGAGCCTATGGCGAGGGCTCTT
AGAGAGTTGGTTGTAGAGGGATCAATAGAAGAAGAGAAAGTGTACACATTCAACATTCCT
GCATACTATCCATCTCTTAGAGAAGTAATGTATATAGTTGATAAGGAGGGATCTTTCACC
ATTGATATCTTGAAAACTTGTGAACTCCATAAAGATGATTTTGATGAAAATATGGCACAA
TGTGTGAGAGCTTTCACTGAGCCTTTGCTTGTTAGCCATTTTGGTGATAATGAAATATTG
ATAGATCAAGTGTTCCACAAGTGTAGGGAGATCTATGTCAATTTCATGACTATAGAGAAG
ACCACATTCACAAATGTTATTGTCTCTTTGATTAAAAGGAACTAG