Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049152
CDS Infomation

pacid=37429618 polypeptide=PGSC0003DMP400033198 locus=PGSC0003DMG400019104 ID=PGSC0003DMT400049152.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGCCTACTGGGAAGAAGAAAACTCAAATCATATCTGCAAATGTCAAACATGGC
ACTTCTAAAGCATTTGATGAAGATACTGCTGTATTCATCACTATGTCTCAAGAATTGAAG
GAAGAAGGGAACAAGCTTTTTCAGAAGCATGATCATGAGGGGTCTATGTTGAAGTATGAG
AAGGCTCTTAATTTGCTTCCACCTAATCATATTGATGTTGCTTATTTGCATACTAATATG
GCTGCTTGTTATATGCAAATTGGTCTTGGTGATTACCCAAGAGCAATAACTGAATGTAAC
TTGGCACTTCAAGTTGCTCCGAAGTATACTAAAGCTTTGATGAAGAGAGCAAAGTGTTAT
CAATCATTGAATAGGCTTGAATTGGCTTTAAGGGATGTTAACCTTGTTTTGAGTATTGAA
CCCAATAATTTGACTGCGCTTGATATTGCAGGGGCGTTGGAACAGAAAGGTGTAAAAATT
GAAGAATTGGAAGTTGTTGTTGAGCCTCCGGTTTCTACTAAGGTTGTAAAATCTACAAAG
AAGAGTAACAAATTTGACAGAAAGAAGGTTGAGGAAAACAAGGTGGTTGTGGAGGAGAAA
AGAAGTGTTAAGGAAGAAAAGATAGTGACAAGAACAGTCAAATTAGTATTTGAGGAGGAT
ATTAGATGGGCACAGTTACCAGTGGATTGTAGTATTAGACTTGTGAGGGACATTGTTCTC
GATCGATTCCCAAACTTGAAGGGTGCATTAATCAAGTATAGGGATCAAGAAGGTGACTTG
GTTACTATAACCACCACTGATGAGCTTAGGTTGGTTGAATCATCTGCTGCTTCTCAGACT
TCTTTAAGACTCTACGTTGTACAAGTTACGCCAGATAAAGAACCTGTATATGAGGGAATG
AGTGGTGAAGAAGATATGAATTCCAGCAGTTACAAATCAACTATAGTCACAGATGATGGG
CATCTGGAGAAAGAAAGGCAACTGAATAAAGGGACAACTTGTGTTGAAGACTGGATCATC
CAATTTGCACGGCTGTTCAAAAATCATGTTGGCTTTGATTGCGACCCATATCTGGATCTT
CATGAGATAGGTATGAAACTCTACTGTGAAACTATGGAAGACACTGTTACAGGTGAAGAA
GCACAAGAGCTTTTTGGAATTGCTGCAGCTAAGTTCCAAGAGATGGCAGCTTTGTCTTTG
TTTAATTGGGGAAATGTTCATATGTCCAGAGCAAGGAAGCGTGTATACTTTACTGAAGAT
GGCTCTCGGGAGTCTCTGTTGAAACAGGTTAAATCTGCATATGACTGGGCTGAAAAAGAA
TATGAAATGGCAGGAAGTAGGTATGGAGAGGCTCTTAGGCTCAAGCCTGATTTCTATGAA
GGCCTTCTTGCACTTGGTCAGCAGCAGTTTGAACACGCAAAACTCTCCTGGTACTATTTG
ATTGGAAGCAAAGTTGAGTTAGAGACGGGGACTTGTGCAGAGATCTTGGAGCTGTATAAC
AAGGCTGAGGATAGCATGGAAAGAGGAACAGAAATGTGGGAGGAGATGGAAGAACAACGT
CTTAATGGACTCTCCAAAAATGATGAATATAAAGCTCTATTGCAGAAAATGGGATTGGAT
GGTCTACTTAAAGATAAACCAGCCGAAGAATCTGAGGAGCAAGCTGCAAACATGAGATCT
CAGATTTACCTCTTATGGGGTACCATGCTCTACGAACGTTCCGTGGTGGAATTTAAGCTG
GGACTACCAACTTGGGAAGAATGTTTGGAGGTTGCAATGGAAAAGTTTGAGCTAGCTGGA
GCATCTCAAATTGATATTGCGGTTATGATAAAGAACCACTGTTCCAATGAAACTGCTCTT
GAAGGTTTTAAGGTCGATGAGATAGTGCAGGCATGGAAAGAGATGTATGATACTAATAGG
TGGCAGACTGGGGTGCCAGCTTTCAGGCTAGAACCATTATTCCGTCGCCGAGTTTCAAAT
CTCCACACTGTATTGGAAAATCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400033198
PEP Infomation

pacid=37429618 transcript=PGSC0003DMT400049152 locus=PGSC0003DMG400019104 ID=PGSC0003DMT400049152.v4.03 annot-version=v4.03
Sequence

MGKPTGKKKTQIISANVKHGTSKAFDEDTAVFITMSQELKEEGNKLFQKHDHEGSMLKYE
KALNLLPPNHIDVAYLHTNMAACYMQIGLGDYPRAITECNLALQVAPKYTKALMKRAKCY
QSLNRLELALRDVNLVLSIEPNNLTALDIAGALEQKGVKIEELEVVVEPPVSTKVVKSTK
KSNKFDRKKVEENKVVVEEKRSVKEEKIVTRTVKLVFEEDIRWAQLPVDCSIRLVRDIVL
DRFPNLKGALIKYRDQEGDLVTITTTDELRLVESSAASQTSLRLYVVQVTPDKEPVYEGM
SGEEDMNSSSYKSTIVTDDGHLEKERQLNKGTTCVEDWIIQFARLFKNHVGFDCDPYLDL
HEIGMKLYCETMEDTVTGEEAQELFGIAAAKFQEMAALSLFNWGNVHMSRARKRVYFTED
GSRESLLKQVKSAYDWAEKEYEMAGSRYGEALRLKPDFYEGLLALGQQQFEHAKLSWYYL
IGSKVELETGTCAEILELYNKAEDSMERGTEMWEEMEEQRLNGLSKNDEYKALLQKMGLD
GLLKDKPAEESEEQAANMRSQIYLLWGTMLYERSVVEFKLGLPTWEECLEVAMEKFELAG
ASQIDIAVMIKNHCSNETALEGFKVDEIVQAWKEMYDTNRWQTGVPAFRLEPLFRRRVSN
LHTVLENL*

Transcript Sequence

Transcript ID

PGSC0003DMT400049152
Transcript Infomation

pacid=37429618 locus=PGSC0003DMG400019104 ID=PGSC0003DMT400049152.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGCCTACTGGGAAGAAGAAAACTCAAATCATATCTGCAAATGTCAAACATGGC
ACTTCTAAAGCATTTGATGAAGATACTGCTGTATTCATCACTATGTCTCAAGAATTGAAG
GAAGAAGGGAACAAGCTTTTTCAGAAGCATGATCATGAGGGGTCTATGTTGAAGTATGAG
AAGGCTCTTAATTTGCTTCCACCTAATCATATTGATGTTGCTTATTTGCATACTAATATG
GCTGCTTGTTATATGCAAATTGGTCTTGGTGATTACCCAAGAGCAATAACTGAATGTAAC
TTGGCACTTCAAGTTGCTCCGAAGTATACTAAAGCTTTGATGAAGAGAGCAAAGTGTTAT
CAATCATTGAATAGGCTTGAATTGGCTTTAAGGGATGTTAACCTTGTTTTGAGTATTGAA
CCCAATAATTTGACTGCGCTTGATATTGCAGGGGCGTTGGAACAGAAAGGTGTAAAAATT
GAAGAATTGGAAGTTGTTGTTGAGCCTCCGGTTTCTACTAAGGTTGTAAAATCTACAAAG
AAGAGTAACAAATTTGACAGAAAGAAGGTTGAGGAAAACAAGGTGGTTGTGGAGGAGAAA
AGAAGTGTTAAGGAAGAAAAGATAGTGACAAGAACAGTCAAATTAGTATTTGAGGAGGAT
ATTAGATGGGCACAGTTACCAGTGGATTGTAGTATTAGACTTGTGAGGGACATTGTTCTC
GATCGATTCCCAAACTTGAAGGGTGCATTAATCAAGTATAGGGATCAAGAAGGTGACTTG
GTTACTATAACCACCACTGATGAGCTTAGGTTGGTTGAATCATCTGCTGCTTCTCAGACT
TCTTTAAGACTCTACGTTGTACAAGTTACGCCAGATAAAGAACCTGTATATGAGGGAATG
AGTGGTGAAGAAGATATGAATTCCAGCAGTTACAAATCAACTATAGTCACAGATGATGGG
CATCTGGAGAAAGAAAGGCAACTGAATAAAGGGACAACTTGTGTTGAAGACTGGATCATC
CAATTTGCACGGCTGTTCAAAAATCATGTTGGCTTTGATTGCGACCCATATCTGGATCTT
CATGAGATAGGTATGAAACTCTACTGTGAAACTATGGAAGACACTGTTACAGGTGAAGAA
GCACAAGAGCTTTTTGGAATTGCTGCAGCTAAGTTCCAAGAGATGGCAGCTTTGTCTTTG
TTTAATTGGGGAAATGTTCATATGTCCAGAGCAAGGAAGCGTGTATACTTTACTGAAGAT
GGCTCTCGGGAGTCTCTGTTGAAACAGGTTAAATCTGCATATGACTGGGCTGAAAAAGAA
TATGAAATGGCAGGAAGTAGGTATGGAGAGGCTCTTAGGCTCAAGCCTGATTTCTATGAA
GGCCTTCTTGCACTTGGTCAGCAGCAGTTTGAACACGCAAAACTCTCCTGGTACTATTTG
ATTGGAAGCAAAGTTGAGTTAGAGACGGGGACTTGTGCAGAGATCTTGGAGCTGTATAAC
AAGGCTGAGGATAGCATGGAAAGAGGAACAGAAATGTGGGAGGAGATGGAAGAACAACGT
CTTAATGGACTCTCCAAAAATGATGAATATAAAGCTCTATTGCAGAAAATGGGATTGGAT
GGTCTACTTAAAGATAAACCAGCCGAAGAATCTGAGGAGCAAGCTGCAAACATGAGATCT
CAGATTTACCTCTTATGGGGTACCATGCTCTACGAACGTTCCGTGGTGGAATTTAAGCTG
GGACTACCAACTTGGGAAGAATGTTTGGAGGTTGCAATGGAAAAGTTTGAGCTAGCTGGA
GCATCTCAAATTGATATTGCGGTTATGATAAAGAACCACTGTTCCAATGAAACTGCTCTT
GAAGGTTTTAAGGTCGATGAGATAGTGCAGGCATGGAAAGAGATGTATGATACTAATAGG
TGGCAGACTGGGGTGCCAGCTTTCAGGCTAGAACCATTATTCCGTCGCCGAGTTTCAAAT
CTCCACACTGTATTGGAAAATCTTTGA