Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049097
CDS Infomation

pacid=37430829 polypeptide=PGSC0003DMP400033168 locus=PGSC0003DMG400019083 ID=PGSC0003DMT400049097.v4.03 annot-version=v4.03
Sequence

ATGGATATACTTATTAATGTTATAAGTGGCTTTATTGTTGAGGTGGGAAAGTTTGTATGT
AAATGCATCTATCCTAATATTGAAAATACTGTCCATTTCTCATCAAATGTTGAAAATTTA
ACGAAGGAAATGGAGACGCTAAAAGAGTTAAGAGATGATAAGAAAGAAAAGGTGGAAAAA
GCTGAGGAAAAAGGCTATAAACCAAAATCAGATGTTATCAAGTGGATCGACGATGTTTGC
CAGCTGGAGAATGAATGGAAAAGTATGCAAGAAAACATTGCAGCAGCGAAGACACTTACA
TATAGGTGTTGTCCCAATTGCAGCCTCCGCTCTGAAGTCTGGACTCAAGCACAGAATAAT
ATCGAAGTTAAACTTTGCAGTCTTAAAAATGGCGGAGAAAGCTTTGGATCCAATTTGATG
GAAGAAAATTACCGTATGGAAAAAGTTGAGCACTTACCAGGACCATCAATAAAAGACCAG
CCAGCCGCAAGAAAGAATCTCGACAAAATCCTCGAACACTTGGAAAACGATGAGGTTGGC
ATCATCGGAGTGTGGGGTGCAGGAGGAATTGGGAAAACTACTTTGGTGAAGAATTTGAAC
AATGAGCTTAAACAGATTGACGTGTCAATTAGGTCTAAACTGTCTTTTGGTGTTGTGATA
TGGGTTACAGTACCCAAACCGCCAATAGACATAAGAAAAGTTCAAGCACAAATTGCTGAC
AGATTAAGCCTAGAGGTAAATACTGATCAGGGAAGTGAAGAAAGCAATGCCAGCAAAATC
TATCAAAGGCTTAAGCAGGAAAAGAGTTTCCTTGTGATACTAGATGATGTTTGGGAAGCT
ATAGATTTGGATCATGTAGGTGTGCCCCAACCCAAAGATCACGCAGGAAGCAATGTTATT
ATTACTTCTCGTAAACGGAAGGTTTGTGAGGGAATGAAAACACACACCATAATGAATATT
TTCACATTGGATGAAGATGAATCTTGGCATCTGTTTATTGAAAATGCGGGAGACGTTGCC
AATCGGGTGGATATTCAGCCATCAGCAATGGGTATTGCAAAAGAGTGTGGTGGTTTACCT
TTAGCAATCACTATTATTGGAGCATCTATGAGAGGGAAGAACATGGTCGAGGAATGGGAA
GATGCTTTGGAATCACTTAGAATGTCTGAACCTAATGACAAAGACACAGGAGATAAGGTT
TACCAGGTCATCAAATGGAGTTTTGATTCTTTAGAGCAAAGAAGCAATAGGAACAAAAGG
AGAAGTGACATTCAAAGTTGTTTCTTGTATTGCTCCTTATATCCAGCGTCTATTCCAACA
AATGATCTCATACATTGCTGGTGGGCAGAGGGGTTCCTTGGTGAACATGACACATATGAA
AAAGCTTACAACAGGGGAATCACAATTATTGAGGATCTAAAAAATGTCTGCTTACTAGAA
GAAGCCCATAAGATGGATTGTGTGAAGATGCATGATGTGGTTCGTGATGTTGCTAAATGG
ATTGATGATTCCTTTGGGTTAACTGACATTTCACATGTTGAAGTAGTGTCAGCTTCTGTC
AAGAGATTATCTTTCATAACCCAAGGAATTCAATATCTACCTGATAACTTCACGGAATGC
CCAAAGACAACATCTTTACTTTTGCAACGCAATGAATCCCTTGTGAAAATTCCCGATAAA
TTCTTTTTGTCATTTCCAGTTCTAAGAGTTCTGAACCTGAGTTATACTCGTATTAGAGCA
CTGCCTTGTTCCGTCAACGAGTTACGTCAGCTACGTGCTCTAATACTACAAAATTGCCGC
ATGTTGGAAATGTTACCATCTATTGGTAATCTTTGCAATTTGCAATTGCTTGATTGTGAT
AACACAAGGTTACATTGCCTGCCGGAAGGAATGGACAAGTTGACAAATCTGAGGCTATTA
AATATGCCTTTAGGTAAGTTTATGAAGAGAATCGACCTGGGGTTTCCTACGAGTTACAAA
GGCTTGAAATGTTACATCTACCCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400033168
PEP Infomation

pacid=37430829 transcript=PGSC0003DMT400049097 locus=PGSC0003DMG400019083 ID=PGSC0003DMT400049097.v4.03 annot-version=v4.03
Sequence

MDILINVISGFIVEVGKFVCKCIYPNIENTVHFSSNVENLTKEMETLKELRDDKKEKVEK
AEEKGYKPKSDVIKWIDDVCQLENEWKSMQENIAAAKTLTYRCCPNCSLRSEVWTQAQNN
IEVKLCSLKNGGESFGSNLMEENYRMEKVEHLPGPSIKDQPAARKNLDKILEHLENDEVG
IIGVWGAGGIGKTTLVKNLNNELKQIDVSIRSKLSFGVVIWVTVPKPPIDIRKVQAQIAD
RLSLEVNTDQGSEESNASKIYQRLKQEKSFLVILDDVWEAIDLDHVGVPQPKDHAGSNVI
ITSRKRKVCEGMKTHTIMNIFTLDEDESWHLFIENAGDVANRVDIQPSAMGIAKECGGLP
LAITIIGASMRGKNMVEEWEDALESLRMSEPNDKDTGDKVYQVIKWSFDSLEQRSNRNKR
RSDIQSCFLYCSLYPASIPTNDLIHCWWAEGFLGEHDTYEKAYNRGITIIEDLKNVCLLE
EAHKMDCVKMHDVVRDVAKWIDDSFGLTDISHVEVVSASVKRLSFITQGIQYLPDNFTEC
PKTTSLLLQRNESLVKIPDKFFLSFPVLRVLNLSYTRIRALPCSVNELRQLRALILQNCR
MLEMLPSIGNLCNLQLLDCDNTRLHCLPEGMDKLTNLRLLNMPLGKFMKRIDLGFPTSYK
GLKCYIYP*

Transcript Sequence

Transcript ID

PGSC0003DMT400049097
Transcript Infomation

pacid=37430829 locus=PGSC0003DMG400019083 ID=PGSC0003DMT400049097.v4.03 annot-version=v4.03
Sequence

ATGGATATACTTATTAATGTTATAAGTGGCTTTATTGTTGAGGTGGGAAAGTTTGTATGT
AAATGCATCTATCCTAATATTGAAAATACTGTCCATTTCTCATCAAATGTTGAAAATTTA
ACGAAGGAAATGGAGACGCTAAAAGAGTTAAGAGATGATAAGAAAGAAAAGGTGGAAAAA
GCTGAGGAAAAAGGCTATAAACCAAAATCAGATGTTATCAAGTGGATCGACGATGTTTGC
CAGCTGGAGAATGAATGGAAAAGTATGCAAGAAAACATTGCAGCAGCGAAGACACTTACA
TATAGGTGTTGTCCCAATTGCAGCCTCCGCTCTGAAGTCTGGACTCAAGCACAGAATAAT
ATCGAAGTTAAACTTTGCAGTCTTAAAAATGGCGGAGAAAGCTTTGGATCCAATTTGATG
GAAGAAAATTACCGTATGGAAAAAGTTGAGCACTTACCAGGACCATCAATAAAAGACCAG
CCAGCCGCAAGAAAGAATCTCGACAAAATCCTCGAACACTTGGAAAACGATGAGGTTGGC
ATCATCGGAGTGTGGGGTGCAGGAGGAATTGGGAAAACTACTTTGGTGAAGAATTTGAAC
AATGAGCTTAAACAGATTGACGTGTCAATTAGGTCTAAACTGTCTTTTGGTGTTGTGATA
TGGGTTACAGTACCCAAACCGCCAATAGACATAAGAAAAGTTCAAGCACAAATTGCTGAC
AGATTAAGCCTAGAGGTAAATACTGATCAGGGAAGTGAAGAAAGCAATGCCAGCAAAATC
TATCAAAGGCTTAAGCAGGAAAAGAGTTTCCTTGTGATACTAGATGATGTTTGGGAAGCT
ATAGATTTGGATCATGTAGGTGTGCCCCAACCCAAAGATCACGCAGGAAGCAATGTTATT
ATTACTTCTCGTAAACGGAAGGTTTGTGAGGGAATGAAAACACACACCATAATGAATATT
TTCACATTGGATGAAGATGAATCTTGGCATCTGTTTATTGAAAATGCGGGAGACGTTGCC
AATCGGGTGGATATTCAGCCATCAGCAATGGGTATTGCAAAAGAGTGTGGTGGTTTACCT
TTAGCAATCACTATTATTGGAGCATCTATGAGAGGGAAGAACATGGTCGAGGAATGGGAA
GATGCTTTGGAATCACTTAGAATGTCTGAACCTAATGACAAAGACACAGGAGATAAGGTT
TACCAGGTCATCAAATGGAGTTTTGATTCTTTAGAGCAAAGAAGCAATAGGAACAAAAGG
AGAAGTGACATTCAAAGTTGTTTCTTGTATTGCTCCTTATATCCAGCGTCTATTCCAACA
AATGATCTCATACATTGCTGGTGGGCAGAGGGGTTCCTTGGTGAACATGACACATATGAA
AAAGCTTACAACAGGGGAATCACAATTATTGAGGATCTAAAAAATGTCTGCTTACTAGAA
GAAGCCCATAAGATGGATTGTGTGAAGATGCATGATGTGGTTCGTGATGTTGCTAAATGG
ATTGATGATTCCTTTGGGTTAACTGACATTTCACATGTTGAAGTAGTGTCAGCTTCTGTC
AAGAGATTATCTTTCATAACCCAAGGAATTCAATATCTACCTGATAACTTCACGGAATGC
CCAAAGACAACATCTTTACTTTTGCAACGCAATGAATCCCTTGTGAAAATTCCCGATAAA
TTCTTTTTGTCATTTCCAGTTCTAAGAGTTCTGAACCTGAGTTATACTCGTATTAGAGCA
CTGCCTTGTTCCGTCAACGAGTTACGTCAGCTACGTGCTCTAATACTACAAAATTGCCGC
ATGTTGGAAATGTTACCATCTATTGGTAATCTTTGCAATTTGCAATTGCTTGATTGTGAT
AACACAAGGTTACATTGCCTGCCGGAAGGAATGGACAAGTTGACAAATCTGAGGCTATTA
AATATGCCTTTAGGTAAGTTTATGAAGAGAATCGACCTGGGGTTTCCTACGAGTTACAAA
GGCTTGAAATGTTACATCTACCCATAA