Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049076
CDS Infomation

pacid=37470128 polypeptide=PGSC0003DMP400033157 locus=PGSC0003DMG400019077 ID=PGSC0003DMT400049076.v4.03 annot-version=v4.03
Sequence

ATGGAAGGAAGAAATCTCTTCTTCCTCACGAGTATAATTTTGCTCTTAATTTTCACTTTC
TTAAACTTACCATCTCCGCTTTCTCACACAACTGATCAGCTATTCGACTGCACCACTTAC
TCCCCGTGGTGCAGTTCGAAAAAACCCTTTTTCCTCCGGCAACCGGAAAATTCTAAAAAT
CACTACGCCGATTTCCCCAATCATCCTTTAGACCCACTGACAATTGGAGAAATTCAAAAA
GTTAAGAAAATCGTTAATTCGATTGCGGAGTTTAGGATGAAAGGTTGCGTTCTTCACTCT
GTCGTACTCGAAGAGCCGGAGAAGGAGGTAGTGTTGAACTGGCGGAAAGGTCACCGGCTT
CCGCCGCGGAAGGCGGCCGTCGTTGCGCGTGCGCTCGGCGTCGTGCACGTGCTTTCCGTG
GATATTGAAACGGGTCGTGTGACCCGACGTGAAACGGGTAGTTATTCGGGTTACCCGATC
ATGACGATCGAGGATATGATCACTGCCACTTCTGCCCCGTTTGCTAGTTCTGATTTTAAC
CGTTCGATTATCCAGCGTGGCGTTGATTTGGCTGACCTGGCATGTCTACCCATCTCCACT
GGTTGGTATGGAAAAATCGAGGAGAAACGAAGAGTGATTAAAGTACAATGTTATACATTG
AAGGACACTATCAATTTCTATATGAGACCAATTGAAGGATTAACAGTACTTCTTGATTTA
GACACCCAACAAGTTATGGAAATTATCGATGAAGGAAAGAGTATACCAATACCAAAGGCC
GCCAACACAGACTATCGCTACTCCCGTATTAAAAAAAACACACAAAAAATAAACTTACTC
AAACCAATATCTATCGAACAACCAAATGGTCCAAGTTTCACTATAGAAAACAATCATCTA
GTTAAATGGGCAAATTGGGAATTTCACCTCAAGCCCGACCCGAGAGCCGGGGTTATTATA
TCCCGGGCCATGGTTCAGGATCCGGATACAGGGAAGATGAGGAATGTTATGTATAAAGGG
TTTACGTCGGAATTGTTTGTACCTTACATGGATCCATCAGATGCATGGTATTTTAAGACG
TATATGGATGCAGGTGAATACGGGTTCGGGTTACAAGCGATGCCACTTGACCCGTTAAAT
GATTGTCCTCGTAATGCGTATTATATGGATGGTGTTTTTGTGGCAGCTGATGGAACACCA
TATGTGCGCTCCAATATGATTTGTGTATTTGAAAGATATGCTGGTGATATTGGATGGCGA
CATGCTGAATGTCCAATTACTGGTTTGCCGATACGAGAAGTAAGGCCAAAGGTGACGTTA
GTGGTGAGAATGGCAGCGTCAGTAGCAAACTATGATTATATTGTCGATTGGGAGTTTCAG
AACGATGGACTTATTCGACCTAAGGTTGGACTAAGTGGAATATTGATGGTGAAAGGCTCT
CCATATGTGAACATGAATCAAGTAAACCAAAATGAATATCTCTATGGCACTCTCTTATCT
GAAAACATAATAGGAGTCATCCATGATCACTATGTAACTTTCCATCTCAACATGGACATC
GATGGTCCATCGAACAATTCTTTCGTGAAGGTGAATCTCCAGAAGGAGATGACTTCTCCT
GGAGAATCACCACGAAGAAGCTACTTAAAAGCTGTTAGAAATGTGGCTAAAACTGAAAAA
GATGCACAAATTAAGCTCAAACTATATGATCCTTCAGAATTCCATGTGATTAATTCTAAT
AAGAAATCAAGAGTTGGGAATCCTGTTGGTTACAAAGTTGTTCCTGGTGGAACTGCTGCT
AGTTTACTTGACCATGATGATCCTCCTCAGAAGAGAGCTGCTTTTACTAATAACCAAATT
TGGGTCACACCTTATAATGAGTCTGAGCAATGGGCTGCTGGCTTGTTTGTTTATCAAAGT
CAAGGTGATGATACTCTTGCTGTTTGGTCTGACAGAGACCGGGCAATTGAGAATAAAGAC
ATAGTGGTGTGGTATACATTAGGGTTCCATCATATTCCATGCCAAGAGGATTTCCCAATA
ATGCCAACAGTATCATCAAGTTTTGAGATAAAGCCAGTTAATTTCTTTGAGAGTAACCCA
ATTCTCAATATTCCACCTAATTCTCCAAAGGACCTCCCAATTTGCAAAGCTGCTGCTTCT
GCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400033157
PEP Infomation

pacid=37470128 transcript=PGSC0003DMT400049076 locus=PGSC0003DMG400019077 ID=PGSC0003DMT400049076.v4.03 annot-version=v4.03
Sequence

MEGRNLFFLTSIILLLIFTFLNLPSPLSHTTDQLFDCTTYSPWCSSKKPFFLRQPENSKN
HYADFPNHPLDPLTIGEIQKVKKIVNSIAEFRMKGCVLHSVVLEEPEKEVVLNWRKGHRL
PPRKAAVVARALGVVHVLSVDIETGRVTRRETGSYSGYPIMTIEDMITATSAPFASSDFN
RSIIQRGVDLADLACLPISTGWYGKIEEKRRVIKVQCYTLKDTINFYMRPIEGLTVLLDL
DTQQVMEIIDEGKSIPIPKAANTDYRYSRIKKNTQKINLLKPISIEQPNGPSFTIENNHL
VKWANWEFHLKPDPRAGVIISRAMVQDPDTGKMRNVMYKGFTSELFVPYMDPSDAWYFKT
YMDAGEYGFGLQAMPLDPLNDCPRNAYYMDGVFVAADGTPYVRSNMICVFERYAGDIGWR
HAECPITGLPIREVRPKVTLVVRMAASVANYDYIVDWEFQNDGLIRPKVGLSGILMVKGS
PYVNMNQVNQNEYLYGTLLSENIIGVIHDHYVTFHLNMDIDGPSNNSFVKVNLQKEMTSP
GESPRRSYLKAVRNVAKTEKDAQIKLKLYDPSEFHVINSNKKSRVGNPVGYKVVPGGTAA
SLLDHDDPPQKRAAFTNNQIWVTPYNESEQWAAGLFVYQSQGDDTLAVWSDRDRAIENKD
IVVWYTLGFHHIPCQEDFPIMPTVSSSFEIKPVNFFESNPILNIPPNSPKDLPICKAAAS
A*

Transcript Sequence

Transcript ID

PGSC0003DMT400049076
Transcript Infomation

pacid=37470128 locus=PGSC0003DMG400019077 ID=PGSC0003DMT400049076.v4.03 annot-version=v4.03
Sequence

ATGGAAGGAAGAAATCTCTTCTTCCTCACGAGTATAATTTTGCTCTTAATTTTCACTTTC
TTAAACTTACCATCTCCGCTTTCTCACACAACTGATCAGCTATTCGACTGCACCACTTAC
TCCCCGTGGTGCAGTTCGAAAAAACCCTTTTTCCTCCGGCAACCGGAAAATTCTAAAAAT
CACTACGCCGATTTCCCCAATCATCCTTTAGACCCACTGACAATTGGAGAAATTCAAAAA
GTTAAGAAAATCGTTAATTCGATTGCGGAGTTTAGGATGAAAGGTTGCGTTCTTCACTCT
GTCGTACTCGAAGAGCCGGAGAAGGAGGTAGTGTTGAACTGGCGGAAAGGTCACCGGCTT
CCGCCGCGGAAGGCGGCCGTCGTTGCGCGTGCGCTCGGCGTCGTGCACGTGCTTTCCGTG
GATATTGAAACGGGTCGTGTGACCCGACGTGAAACGGGTAGTTATTCGGGTTACCCGATC
ATGACGATCGAGGATATGATCACTGCCACTTCTGCCCCGTTTGCTAGTTCTGATTTTAAC
CGTTCGATTATCCAGCGTGGCGTTGATTTGGCTGACCTGGCATGTCTACCCATCTCCACT
GGTTGGTATGGAAAAATCGAGGAGAAACGAAGAGTGATTAAAGTACAATGTTATACATTG
AAGGACACTATCAATTTCTATATGAGACCAATTGAAGGATTAACAGTACTTCTTGATTTA
GACACCCAACAAGTTATGGAAATTATCGATGAAGGAAAGAGTATACCAATACCAAAGGCC
GCCAACACAGACTATCGCTACTCCCGTATTAAAAAAAACACACAAAAAATAAACTTACTC
AAACCAATATCTATCGAACAACCAAATGGTCCAAGTTTCACTATAGAAAACAATCATCTA
GTTAAATGGGCAAATTGGGAATTTCACCTCAAGCCCGACCCGAGAGCCGGGGTTATTATA
TCCCGGGCCATGGTTCAGGATCCGGATACAGGGAAGATGAGGAATGTTATGTATAAAGGG
TTTACGTCGGAATTGTTTGTACCTTACATGGATCCATCAGATGCATGGTATTTTAAGACG
TATATGGATGCAGGTGAATACGGGTTCGGGTTACAAGCGATGCCACTTGACCCGTTAAAT
GATTGTCCTCGTAATGCGTATTATATGGATGGTGTTTTTGTGGCAGCTGATGGAACACCA
TATGTGCGCTCCAATATGATTTGTGTATTTGAAAGATATGCTGGTGATATTGGATGGCGA
CATGCTGAATGTCCAATTACTGGTTTGCCGATACGAGAAGTAAGGCCAAAGGTGACGTTA
GTGGTGAGAATGGCAGCGTCAGTAGCAAACTATGATTATATTGTCGATTGGGAGTTTCAG
AACGATGGACTTATTCGACCTAAGGTTGGACTAAGTGGAATATTGATGGTGAAAGGCTCT
CCATATGTGAACATGAATCAAGTAAACCAAAATGAATATCTCTATGGCACTCTCTTATCT
GAAAACATAATAGGAGTCATCCATGATCACTATGTAACTTTCCATCTCAACATGGACATC
GATGGTCCATCGAACAATTCTTTCGTGAAGGTGAATCTCCAGAAGGAGATGACTTCTCCT
GGAGAATCACCACGAAGAAGCTACTTAAAAGCTGTTAGAAATGTGGCTAAAACTGAAAAA
GATGCACAAATTAAGCTCAAACTATATGATCCTTCAGAATTCCATGTGATTAATTCTAAT
AAGAAATCAAGAGTTGGGAATCCTGTTGGTTACAAAGTTGTTCCTGGTGGAACTGCTGCT
AGTTTACTTGACCATGATGATCCTCCTCAGAAGAGAGCTGCTTTTACTAATAACCAAATT
TGGGTCACACCTTATAATGAGTCTGAGCAATGGGCTGCTGGCTTGTTTGTTTATCAAAGT
CAAGGTGATGATACTCTTGCTGTTTGGTCTGACAGAGACCGGGCAATTGAGAATAAAGAC
ATAGTGGTGTGGTATACATTAGGGTTCCATCATATTCCATGCCAAGAGGATTTCCCAATA
ATGCCAACAGTATCATCAAGTTTTGAGATAAAGCCAGTTAATTTCTTTGAGAGTAACCCA
ATTCTCAATATTCCACCTAATTCTCCAAAGGACCTCCCAATTTGCAAAGCTGCTGCTTCT
GCTTGA