Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049056
CDS Infomation

pacid=37469229 polypeptide=PGSC0003DMP400033144 locus=PGSC0003DMG400019063 ID=PGSC0003DMT400049056.v4.03 annot-version=v4.03
Sequence

ATGGCACATTTACTTTCTACTACGTGTTCTTTAGATGTCTCTTCCAGCAACAAGCTGCAT
TTCAAGTCAATTAACCAATGCTCTACTCCTATTCCAACATCTTTTAATATGGGAATTTCT
TTCTCACCCTTGAAAAAGCTAAGTTTGCAAAGCAAAAGGTCTGCAAAATATGTGGTCAGA
GCTTCAGCTGTTTCCATGAGCCAAGAAGCCAGAACCCAGAATGACTCTGGTTCTCAACAG
ACCACTGATGGAGCCTCCACTAGGAAGAAGGTCATGGTCATTGGTGGGGATGGCTATTGT
GGCTGGGCTACTGCTCTCCACCTATCCAACAAGGGATATGAAGTTGCCATTGTTGACAAC
CTTATCCGTCGCCTATTTGACGACCAGCTTGGTCTAGATTCTCTAACACCCATCTCATCA
ATCCATAACCGCATAAGGCGTTGGAAATCTCTCACAGGAAAAGACATTCAACTGTTTGTT
GGTGATATATGTGAGTTTGAGTTCTTGGCAGAAGCCTTCAAATCCTTTGAACCTGATGCT
GTAGTCCATTTTGGAGAGCAGAGGTCTGCCCCTTATTCTATGATTGATAGGTCAAGAGCT
ATTTATACCCAACATAATAATGTGATAGGGACACTTAATGTACTATTTGCCATAAAGGAG
TTTAGGGAAGAGTGTCATTTGGTCAAACTCGGGACAATGGGGGAATATGGGACCCCTAAC
ATAGATATTGAAGAAGGTTATATAACTATTACTCATAATGGAAGAACAGATACTCTTCCT
TATCCCAAACAAGCAAGCTCTTTCTATCATTTGAGTAAAGTCCATGATTCCCACAACATA
GCCTTTACTTGCAAGGCGTGGGGAATAAGAGCTACCGACCTGAATCAGGGAGTTGTATAT
GGGGTGAGGACTGATGAAACTGCAATGCATGAGGAGCTGGTTAACAGACTTGATTATGAT
GGAGTATTTGGAACTGCACTAAATCGGTTCTGTGTTCAGGCTGCTGTTGGACATCCACTT
ACGGTGTATGGTAAAGGAGGGCAGACCAGGGGATATTTGGATATTAGAGATACAGTTCAA
TGTGTTGAAATTGCAATTGCCAATCCAGCAAAACCAGGAGAGTTCCGGGTTTTCAACCAA
TTCACAGAGCAGTTTTCAGTAAATGAGCTTGCAGCCCTTGTCACCAAGGCAGGGGAAAAA
CTTGGACTTGAGGTGAAGGCCATATCAGTGCCCAATCCAAGAGTAGAAGCAGAGGAACAC
TACTACAATGCCAAACATACTAAACTTATTGAGCTGGGACTACAGCCTCACCTTCTTTCT
GATTCTCTTCTAGACTCTCTATTGAACTTTGCTGTTCAATATAAGGATCGTGTCGACACA
AAGCAGATAATGCCTAGTGTTTCCTGGAAAAAAATTGGCGCGAAGCCAAAGACTGTTGCA
GCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400033144
PEP Infomation

pacid=37469229 transcript=PGSC0003DMT400049056 locus=PGSC0003DMG400019063 ID=PGSC0003DMT400049056.v4.03 annot-version=v4.03
Sequence

MAHLLSTTCSLDVSSSNKLHFKSINQCSTPIPTSFNMGISFSPLKKLSLQSKRSAKYVVR
ASAVSMSQEARTQNDSGSQQTTDGASTRKKVMVIGGDGYCGWATALHLSNKGYEVAIVDN
LIRRLFDDQLGLDSLTPISSIHNRIRRWKSLTGKDIQLFVGDICEFEFLAEAFKSFEPDA
VVHFGEQRSAPYSMIDRSRAIYTQHNNVIGTLNVLFAIKEFREECHLVKLGTMGEYGTPN
IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVY
GVRTDETAMHEELVNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ
CVEIAIANPAKPGEFRVFNQFTEQFSVNELAALVTKAGEKLGLEVKAISVPNPRVEAEEH
YYNAKHTKLIELGLQPHLLSDSLLDSLLNFAVQYKDRVDTKQIMPSVSWKKIGAKPKTVA
A*

Transcript Sequence

Transcript ID

PGSC0003DMT400049056
Transcript Infomation

pacid=37469229 locus=PGSC0003DMG400019063 ID=PGSC0003DMT400049056.v4.03 annot-version=v4.03
Sequence

ATGGCACATTTACTTTCTACTACGTGTTCTTTAGATGTCTCTTCCAGCAACAAGCTGCAT
TTCAAGTCAATTAACCAATGCTCTACTCCTATTCCAACATCTTTTAATATGGGAATTTCT
TTCTCACCCTTGAAAAAGCTAAGTTTGCAAAGCAAAAGGTCTGCAAAATATGTGGTCAGA
GCTTCAGCTGTTTCCATGAGCCAAGAAGCCAGAACCCAGAATGACTCTGGTTCTCAACAG
ACCACTGATGGAGCCTCCACTAGGAAGAAGGTCATGGTCATTGGTGGGGATGGCTATTGT
GGCTGGGCTACTGCTCTCCACCTATCCAACAAGGGATATGAAGTTGCCATTGTTGACAAC
CTTATCCGTCGCCTATTTGACGACCAGCTTGGTCTAGATTCTCTAACACCCATCTCATCA
ATCCATAACCGCATAAGGCGTTGGAAATCTCTCACAGGAAAAGACATTCAACTGTTTGTT
GGTGATATATGTGAGTTTGAGTTCTTGGCAGAAGCCTTCAAATCCTTTGAACCTGATGCT
GTAGTCCATTTTGGAGAGCAGAGGTCTGCCCCTTATTCTATGATTGATAGGTCAAGAGCT
ATTTATACCCAACATAATAATGTGATAGGGACACTTAATGTACTATTTGCCATAAAGGAG
TTTAGGGAAGAGTGTCATTTGGTCAAACTCGGGACAATGGGGGAATATGGGACCCCTAAC
ATAGATATTGAAGAAGGTTATATAACTATTACTCATAATGGAAGAACAGATACTCTTCCT
TATCCCAAACAAGCAAGCTCTTTCTATCATTTGAGTAAAGTCCATGATTCCCACAACATA
GCCTTTACTTGCAAGGCGTGGGGAATAAGAGCTACCGACCTGAATCAGGGAGTTGTATAT
GGGGTGAGGACTGATGAAACTGCAATGCATGAGGAGCTGGTTAACAGACTTGATTATGAT
GGAGTATTTGGAACTGCACTAAATCGGTTCTGTGTTCAGGCTGCTGTTGGACATCCACTT
ACGGTGTATGGTAAAGGAGGGCAGACCAGGGGATATTTGGATATTAGAGATACAGTTCAA
TGTGTTGAAATTGCAATTGCCAATCCAGCAAAACCAGGAGAGTTCCGGGTTTTCAACCAA
TTCACAGAGCAGTTTTCAGTAAATGAGCTTGCAGCCCTTGTCACCAAGGCAGGGGAAAAA
CTTGGACTTGAGGTGAAGGCCATATCAGTGCCCAATCCAAGAGTAGAAGCAGAGGAACAC
TACTACAATGCCAAACATACTAAACTTATTGAGCTGGGACTACAGCCTCACCTTCTTTCT
GATTCTCTTCTAGACTCTCTATTGAACTTTGCTGTTCAATATAAGGATCGTGTCGACACA
AAGCAGATAATGCCTAGTGTTTCCTGGAAAAAAATTGGCGCGAAGCCAAAGACTGTTGCA
GCATAA