Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049051
CDS Infomation

pacid=37467211 polypeptide=PGSC0003DMP400033142 locus=PGSC0003DMG401019061 ID=PGSC0003DMT400049051.v4.03 annot-version=v4.03
Sequence

ATGTTCAAGAAGGCAGTGGACGCCAAGTCTCACCAGCGACTTTCTGGCGCCGACCGGAAA
AAGCTCCGTCGCACTATCAGAGACCGTTTTTCCAATGCCTCTGATGCCCTTCTCGACCTT
ATACTTCCTCCCAAAGCGGAGTTATCTGTTTCGAAATACCCAAATCGGGTACTCGTTTAT
GGCTTGGAGGGCGAATGTCCTATGTTCTTTGACGTAGATGGGCGAGGTCGTGATATTTTC
CCTACAGTGTATGCTCTGTGGAGAGTCCCAGAACTTTTGCCTGCTTTTGTGCTGAAAGGG
GGTGACGTTTCTCGTTTTATGCTCGGAGGGGCAGATTTAATGTTCCCTGGTATCAGGATA
ACTACTGAAGGGTTACCCTCATTTTCTTCTGGGGAGCCATGGGCAGTGAAGGTTCCTGGA
AATCCTGCCGCAATAGCTGTGGGGACAACTACCATGAGTAGTACAGAAGCTTTAAAAGCT
GGTCTACGTGGAAAGGCCTTAAAAATATGTCATTACTATCGAGACACCCTTTGGGAATCT
GCTGAAAATTGTCATGTACCAAATGCTGGTTTTCTAGAAGACGTCGTGTTTGAAGATCCT
GCTCTTTTCTTGAGTGGTAGGGCATCTGATTCAAGTGAAGTTGATCCTTCAGTTGACCCA
GGAAATATGATTAGCAATGAAGACATGAGAGAAGTGATTGATGCTGATACAGCTTCATCA
GGTGTTGGTCAGCCTTCTACTACACAGAATGATGGAGCAGATGAAATTACTGTGCAGCTT
ACTAATGATCTAAGTGAGTTGAAGGTTGCAGAAACTTATGTAGATGAATCAAATATTGAG
GGACAACATTCCTTGTGTGTTGAAGAGGTAGATGCACTCTTGGACAAGTGCCTTCTACAA
GCATTACATACGACAATTAAAGAGAAAGACCTGCCCATCCCTGGAAGTACATTTTGGTCA
AGTCACGTGCTACCTTGCAGGCCTCCAGGCATAACACTCGACATAAAGAAGTCATCTCAC
AAGAAATTGTCCAAGTGGCTACAGGCTAAAGCCTCTGGTGGATTGATCTCAGTGAAAGAA
GATAAACATAAGAAAGAGGTGATTCTGTTCTCTGTTAATCGAAATCATCCAGACTACATG
TCCTACAAGCCAGAAAAGAAAGAAGTGGACAAGACCGGGCCTTCAACAAATAATGTTTCT
TCTGAAGAACGGGTACAGAAGTCACTGGAAGTTTCTGAAATTTATAAACCAAGTGTGCAT
GTAAATCCTATTTTTGCTTCTGTTGGTGCTGAAACTAGTAGACTTTACACTGCATCTGAA
GCCTCTGAAATAGTGTTCCAGTACGTTGAGAAAGAAAATCTTGTCAAGCCGTCGAATAAG
TCCACTGTGACGTTAGATGCAACTCTATGCGATGCTTTATTTAAGGGAGCCATAAAAAAG
GGATCAACTTATCCAACTGAAATTCATAAGAAGGATTTGGGGCAAACATTTATTGGTAGG
ATGCAAGCACATCATTGTGTGACTAGAGGAAACGATACAGTTGTTCGCAAAGGAGCCTTG
AAGCCAATCCAGATAATGACAGAGCGGAGGCAAGGAAACAAGAAAGTGACTAAACTTTCT
GGAATGGAGTCATTTCTGCTGGATTCAGAGACTTTGGCTTCAGAGCTGCAGAAGAAGTGT
GCCAGTAGCACTACTGTGGCAGAACTTCCAGGTAAAAAAGGTGAAGAAGTTTTGGTTCAA
GGAGGAGTTATTGATGATCTTGCAAGATACCTTGTTGAACAGTATGGTGTCCCAAAAAGA
TATATCGAAGTGCTTGATAAAACAAAGCGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033142
PEP Infomation

pacid=37467211 transcript=PGSC0003DMT400049051 locus=PGSC0003DMG401019061 ID=PGSC0003DMT400049051.v4.03 annot-version=v4.03
Sequence

MFKKAVDAKSHQRLSGADRKKLRRTIRDRFSNASDALLDLILPPKAELSVSKYPNRVLVY
GLEGECPMFFDVDGRGRDIFPTVYALWRVPELLPAFVLKGGDVSRFMLGGADLMFPGIRI
TTEGLPSFSSGEPWAVKVPGNPAAIAVGTTTMSSTEALKAGLRGKALKICHYYRDTLWES
AENCHVPNAGFLEDVVFEDPALFLSGRASDSSEVDPSVDPGNMISNEDMREVIDADTASS
GVGQPSTTQNDGADEITVQLTNDLSELKVAETYVDESNIEGQHSLCVEEVDALLDKCLLQ
ALHTTIKEKDLPIPGSTFWSSHVLPCRPPGITLDIKKSSHKKLSKWLQAKASGGLISVKE
DKHKKEVILFSVNRNHPDYMSYKPEKKEVDKTGPSTNNVSSEERVQKSLEVSEIYKPSVH
VNPIFASVGAETSRLYTASEASEIVFQYVEKENLVKPSNKSTVTLDATLCDALFKGAIKK
GSTYPTEIHKKDLGQTFIGRMQAHHCVTRGNDTVVRKGALKPIQIMTERRQGNKKVTKLS
GMESFLLDSETLASELQKKCASSTTVAELPGKKGEEVLVQGGVIDDLARYLVEQYGVPKR
YIEVLDKTKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400049051
Transcript Infomation

pacid=37467211 locus=PGSC0003DMG401019061 ID=PGSC0003DMT400049051.v4.03 annot-version=v4.03
Sequence

ATGTTCAAGAAGGCAGTGGACGCCAAGTCTCACCAGCGACTTTCTGGCGCCGACCGGAAA
AAGCTCCGTCGCACTATCAGAGACCGTTTTTCCAATGCCTCTGATGCCCTTCTCGACCTT
ATACTTCCTCCCAAAGCGGAGTTATCTGTTTCGAAATACCCAAATCGGGTACTCGTTTAT
GGCTTGGAGGGCGAATGTCCTATGTTCTTTGACGTAGATGGGCGAGGTCGTGATATTTTC
CCTACAGTGTATGCTCTGTGGAGAGTCCCAGAACTTTTGCCTGCTTTTGTGCTGAAAGGG
GGTGACGTTTCTCGTTTTATGCTCGGAGGGGCAGATTTAATGTTCCCTGGTATCAGGATA
ACTACTGAAGGGTTACCCTCATTTTCTTCTGGGGAGCCATGGGCAGTGAAGGTTCCTGGA
AATCCTGCCGCAATAGCTGTGGGGACAACTACCATGAGTAGTACAGAAGCTTTAAAAGCT
GGTCTACGTGGAAAGGCCTTAAAAATATGTCATTACTATCGAGACACCCTTTGGGAATCT
GCTGAAAATTGTCATGTACCAAATGCTGGTTTTCTAGAAGACGTCGTGTTTGAAGATCCT
GCTCTTTTCTTGAGTGGTAGGGCATCTGATTCAAGTGAAGTTGATCCTTCAGTTGACCCA
GGAAATATGATTAGCAATGAAGACATGAGAGAAGTGATTGATGCTGATACAGCTTCATCA
GGTGTTGGTCAGCCTTCTACTACACAGAATGATGGAGCAGATGAAATTACTGTGCAGCTT
ACTAATGATCTAAGTGAGTTGAAGGTTGCAGAAACTTATGTAGATGAATCAAATATTGAG
GGACAACATTCCTTGTGTGTTGAAGAGGTAGATGCACTCTTGGACAAGTGCCTTCTACAA
GCATTACATACGACAATTAAAGAGAAAGACCTGCCCATCCCTGGAAGTACATTTTGGTCA
AGTCACGTGCTACCTTGCAGGCCTCCAGGCATAACACTCGACATAAAGAAGTCATCTCAC
AAGAAATTGTCCAAGTGGCTACAGGCTAAAGCCTCTGGTGGATTGATCTCAGTGAAAGAA
GATAAACATAAGAAAGAGGTGATTCTGTTCTCTGTTAATCGAAATCATCCAGACTACATG
TCCTACAAGCCAGAAAAGAAAGAAGTGGACAAGACCGGGCCTTCAACAAATAATGTTTCT
TCTGAAGAACGGGTACAGAAGTCACTGGAAGTTTCTGAAATTTATAAACCAAGTGTGCAT
GTAAATCCTATTTTTGCTTCTGTTGGTGCTGAAACTAGTAGACTTTACACTGCATCTGAA
GCCTCTGAAATAGTGTTCCAGTACGTTGAGAAAGAAAATCTTGTCAAGCCGTCGAATAAG
TCCACTGTGACGTTAGATGCAACTCTATGCGATGCTTTATTTAAGGGAGCCATAAAAAAG
GGATCAACTTATCCAACTGAAATTCATAAGAAGGATTTGGGGCAAACATTTATTGGTAGG
ATGCAAGCACATCATTGTGTGACTAGAGGAAACGATACAGTTGTTCGCAAAGGAGCCTTG
AAGCCAATCCAGATAATGACAGAGCGGAGGCAAGGAAACAAGAAAGTGACTAAACTTTCT
GGAATGGAGTCATTTCTGCTGGATTCAGAGACTTTGGCTTCAGAGCTGCAGAAGAAGTGT
GCCAGTAGCACTACTGTGGCAGAACTTCCAGGTAAAAAAGGTGAAGAAGTTTTGGTTCAA
GGAGGAGTTATTGATGATCTTGCAAGATACCTTGTTGAACAGTATGGTGTCCCAAAAAGA
TATATCGAAGTGCTTGATAAAACAAAGCGGTAA