Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048970
CDS Infomation

pacid=37434141 polypeptide=PGSC0003DMP400033094 locus=PGSC0003DMG400019029 ID=PGSC0003DMT400048970.v4.03 annot-version=v4.03
Sequence

ATGAACAAATTTCAATCCTTCGACGATTTTGTTAAGGTCCACGGCGTACTTCTAGCGGCC
GCCGGCATCCCTCAGTCACTCTACAAGCTTCTCTTTCAGAAGCTCTCTTCCGATACTTTC
GACGGCGGACACTATTTCCAGATTGAGCCGATTGAAGATGGCCGCCAAAGAAGGCTACTT
TTCACTTCTGATTCCATCGCCAAACACTCCAATCTCTTCCTTGTTGATCATGCTTGGACT
TTTCGCCTATCCGATGCTTATAAGCAGTTGTGTGAAGTTCCGGGTTTAGCAGAAAGAATG
GCTGCATTAATGTGTGTAGATGTTGATTTGGACTCAGCGGCTGAGGAGGCAGGTGAAGAG
GATAGTAGCAAACTGAGTGCAGTGGAAATAGTGGAGAGAGAAATGTGTAAAGTAAAAGAA
GGCCGGGATGATACGAGATGGTTGGAGCTTGAGGAACTTGACATTGATGATCACATGCTT
GTATCTCTTGATTTGCCTAGTAAATTTCCGAACTTACTGGCACTGAGCCTGTGCGGCAAC
AATCTGAGGGATGTTGAGGTTGTTTCTAAGGAAGTTACCCATCTCAACAATCTTAAAGCT
CTCTGGCTGAATAATAATCCGTTTTTGGAGCATAGTAATTCAGAGGCTGCAATCATTCAG
GGTTGTCCTAGTTTGGAAATTTGCAACTCAAAATTTACATCTAACTATGGAGAGTGGGCA
TTAGGATTTTGTGGTGGAATCTATGACAAAGATAATGCAGACTCTGCTCATCAAAGAGAG
CATCCTTTGGAGAGTGTGACATCTCTAGACCTTAGTAACAGGTTTATTCGCAATCTGATG
AACAAGGCATTTAATCCTGAAGAGATCACATCTCTTTCTTATTTAAACTTGCGTGGAAAT
CCATTGGACCAGAATTCTCTTAACGATTTATTGCAGCTTCTTAAAGGATTCAGTTGTTTG
CATTCTCTGGAGGTGGATATCCCAGGGCCTTTAGGAGAAAGTGCTGCTGAAATTGTTGAA
GCCCTGCCTAATCTTTCTCTACTAAATGGAGTAAACACATCGAAAATAATGGAGTACGGG
AAGTCTGTGGTTGATTCAATGTTGCAACCATGTCTTCCTGAATGGACTGCTGGAGAACCT
CTAACAGATCGTGTCATTAATGCTATGTGGTTGTACTTAATGACGTATAGACTTGCCGAT
GAAGAAAAGATTGACGAAACCTCTGTATGGTATGTAATGGATGAACTTGGTTCTGCTTTG
CGCCACAGCGACAAGCCAAACTTTAGAGTATCTCCTTTTCTCTACATGCCAGAGGGCAAT
TTGGCATCAGCTGTGAGTTATTCAATTCTTTGGCCGATTGATGATGTTCGAGAAGGTGAT
GAGTGCACTCGTGATTACCTATTTGGTATCGGGGAAGAGAAGCAACGATCTGCTCGCCTA
ACTGCTTGGTTCCATACACCAAAAAATTATTTTATCAAAGAATATGAAATATACAAGAAC
ACATTGCAATCAATCAAAATTGCTAGCCCAGTACAGGGGTCATCAATTACAAGTAGTCTG
TGTCGTGGTGATGGAAGAGTTTTACATGTGTATGCTGACATACCTCAAGTGGAAAAATAT
CTGACTCGTCCTGAGTTTGTTATCACAACTGAGCCCAAAGATGCAGACATTATATGGACA
AGCATGCAGATAGATGAGGAGACAAAGAAGGCAACAGGAATAAATGATGAACAATACATA
AATCAATTTCCATTTGAGGCTTGCCTGGTTATGAAACATCACTTGGCCAAAACTATTCAG
AAGGCTCATGGGTTGGTCGAATGGCTTCAGCCTACTTATAATCTTGAGACACAGCTAAGT
CAACTTATTGGAGATTTTCACGTACGTGAAAGAGAGAAACTAGACAATTTGTGGATCTTG
AAGCCATGGAACATGGCAAGAACTATTGATACGACAATAAATAGCAATCTATCTGCTATT
ATTCGTCTCATGGAAACTGGCCCAAAAATCTGTCAGAAGTACATTGAGCATCCTGCTCTA
TTTAAAGGGAGAAAATTTGATCTCCGATATATTGTCTTGGTTCGCAGTATGAATCCCCTG
GAGATCTTCCTTGCAGAAGTTTTCTGGGCTAGATTGGCAAACAACAAATACACTTTGGAG
AAAAATAGCTTTGATCAATATGAGACTCATTTCACTGTTATGAACTACAGAGGCAAGTTG
AACCATATGAACACACCAGATTTTGTGAAAGAATTTGAGAAAGAACATGAGGTCAACTGG
CTGGATATCCACTCAAGGATTAGAAATATGATCAAATCGGCTTTTGAAGCAGCAGCTGCT
GTGCATCCAGAAATGCATCATAGCAAATCTAGGGCAATGTATGGGGTTGATGTCATGCTT
GATAGTCATTTTCAGCCTAAATTATTGGAGATTACCTACTGCCCAGACTGTACTAGGGCA
GTCACATATGACACTGAAGCTGTCGTCGGTGGAGGAGAAACTGTTAAAGGAAAAGAGTTC
TACAACTATATCTTTGGCTGTCTATTTCTAAATGAAACTAATCATGTTTCCCAATTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400033094
PEP Infomation

pacid=37434141 transcript=PGSC0003DMT400048970 locus=PGSC0003DMG400019029 ID=PGSC0003DMT400048970.v4.03 annot-version=v4.03
Sequence

MNKFQSFDDFVKVHGVLLAAAGIPQSLYKLLFQKLSSDTFDGGHYFQIEPIEDGRQRRLL
FTSDSIAKHSNLFLVDHAWTFRLSDAYKQLCEVPGLAERMAALMCVDVDLDSAAEEAGEE
DSSKLSAVEIVEREMCKVKEGRDDTRWLELEELDIDDHMLVSLDLPSKFPNLLALSLCGN
NLRDVEVVSKEVTHLNNLKALWLNNNPFLEHSNSEAAIIQGCPSLEICNSKFTSNYGEWA
LGFCGGIYDKDNADSAHQREHPLESVTSLDLSNRFIRNLMNKAFNPEEITSLSYLNLRGN
PLDQNSLNDLLQLLKGFSCLHSLEVDIPGPLGESAAEIVEALPNLSLLNGVNTSKIMEYG
KSVVDSMLQPCLPEWTAGEPLTDRVINAMWLYLMTYRLADEEKIDETSVWYVMDELGSAL
RHSDKPNFRVSPFLYMPEGNLASAVSYSILWPIDDVREGDECTRDYLFGIGEEKQRSARL
TAWFHTPKNYFIKEYEIYKNTLQSIKIASPVQGSSITSSLCRGDGRVLHVYADIPQVEKY
LTRPEFVITTEPKDADIIWTSMQIDEETKKATGINDEQYINQFPFEACLVMKHHLAKTIQ
KAHGLVEWLQPTYNLETQLSQLIGDFHVREREKLDNLWILKPWNMARTIDTTINSNLSAI
IRLMETGPKICQKYIEHPALFKGRKFDLRYIVLVRSMNPLEIFLAEVFWARLANNKYTLE
KNSFDQYETHFTVMNYRGKLNHMNTPDFVKEFEKEHEVNWLDIHSRIRNMIKSAFEAAAA
VHPEMHHSKSRAMYGVDVMLDSHFQPKLLEITYCPDCTRAVTYDTEAVVGGGETVKGKEF
YNYIFGCLFLNETNHVSQL*

Transcript Sequence

Transcript ID

PGSC0003DMT400048970
Transcript Infomation

pacid=37434141 locus=PGSC0003DMG400019029 ID=PGSC0003DMT400048970.v4.03 annot-version=v4.03
Sequence

ATGAACAAATTTCAATCCTTCGACGATTTTGTTAAGGTCCACGGCGTACTTCTAGCGGCC
GCCGGCATCCCTCAGTCACTCTACAAGCTTCTCTTTCAGAAGCTCTCTTCCGATACTTTC
GACGGCGGACACTATTTCCAGATTGAGCCGATTGAAGATGGCCGCCAAAGAAGGCTACTT
TTCACTTCTGATTCCATCGCCAAACACTCCAATCTCTTCCTTGTTGATCATGCTTGGACT
TTTCGCCTATCCGATGCTTATAAGCAGTTGTGTGAAGTTCCGGGTTTAGCAGAAAGAATG
GCTGCATTAATGTGTGTAGATGTTGATTTGGACTCAGCGGCTGAGGAGGCAGGTGAAGAG
GATAGTAGCAAACTGAGTGCAGTGGAAATAGTGGAGAGAGAAATGTGTAAAGTAAAAGAA
GGCCGGGATGATACGAGATGGTTGGAGCTTGAGGAACTTGACATTGATGATCACATGCTT
GTATCTCTTGATTTGCCTAGTAAATTTCCGAACTTACTGGCACTGAGCCTGTGCGGCAAC
AATCTGAGGGATGTTGAGGTTGTTTCTAAGGAAGTTACCCATCTCAACAATCTTAAAGCT
CTCTGGCTGAATAATAATCCGTTTTTGGAGCATAGTAATTCAGAGGCTGCAATCATTCAG
GGTTGTCCTAGTTTGGAAATTTGCAACTCAAAATTTACATCTAACTATGGAGAGTGGGCA
TTAGGATTTTGTGGTGGAATCTATGACAAAGATAATGCAGACTCTGCTCATCAAAGAGAG
CATCCTTTGGAGAGTGTGACATCTCTAGACCTTAGTAACAGGTTTATTCGCAATCTGATG
AACAAGGCATTTAATCCTGAAGAGATCACATCTCTTTCTTATTTAAACTTGCGTGGAAAT
CCATTGGACCAGAATTCTCTTAACGATTTATTGCAGCTTCTTAAAGGATTCAGTTGTTTG
CATTCTCTGGAGGTGGATATCCCAGGGCCTTTAGGAGAAAGTGCTGCTGAAATTGTTGAA
GCCCTGCCTAATCTTTCTCTACTAAATGGAGTAAACACATCGAAAATAATGGAGTACGGG
AAGTCTGTGGTTGATTCAATGTTGCAACCATGTCTTCCTGAATGGACTGCTGGAGAACCT
CTAACAGATCGTGTCATTAATGCTATGTGGTTGTACTTAATGACGTATAGACTTGCCGAT
GAAGAAAAGATTGACGAAACCTCTGTATGGTATGTAATGGATGAACTTGGTTCTGCTTTG
CGCCACAGCGACAAGCCAAACTTTAGAGTATCTCCTTTTCTCTACATGCCAGAGGGCAAT
TTGGCATCAGCTGTGAGTTATTCAATTCTTTGGCCGATTGATGATGTTCGAGAAGGTGAT
GAGTGCACTCGTGATTACCTATTTGGTATCGGGGAAGAGAAGCAACGATCTGCTCGCCTA
ACTGCTTGGTTCCATACACCAAAAAATTATTTTATCAAAGAATATGAAATATACAAGAAC
ACATTGCAATCAATCAAAATTGCTAGCCCAGTACAGGGGTCATCAATTACAAGTAGTCTG
TGTCGTGGTGATGGAAGAGTTTTACATGTGTATGCTGACATACCTCAAGTGGAAAAATAT
CTGACTCGTCCTGAGTTTGTTATCACAACTGAGCCCAAAGATGCAGACATTATATGGACA
AGCATGCAGATAGATGAGGAGACAAAGAAGGCAACAGGAATAAATGATGAACAATACATA
AATCAATTTCCATTTGAGGCTTGCCTGGTTATGAAACATCACTTGGCCAAAACTATTCAG
AAGGCTCATGGGTTGGTCGAATGGCTTCAGCCTACTTATAATCTTGAGACACAGCTAAGT
CAACTTATTGGAGATTTTCACGTACGTGAAAGAGAGAAACTAGACAATTTGTGGATCTTG
AAGCCATGGAACATGGCAAGAACTATTGATACGACAATAAATAGCAATCTATCTGCTATT
ATTCGTCTCATGGAAACTGGCCCAAAAATCTGTCAGAAGTACATTGAGCATCCTGCTCTA
TTTAAAGGGAGAAAATTTGATCTCCGATATATTGTCTTGGTTCGCAGTATGAATCCCCTG
GAGATCTTCCTTGCAGAAGTTTTCTGGGCTAGATTGGCAAACAACAAATACACTTTGGAG
AAAAATAGCTTTGATCAATATGAGACTCATTTCACTGTTATGAACTACAGAGGCAAGTTG
AACCATATGAACACACCAGATTTTGTGAAAGAATTTGAGAAAGAACATGAGGTCAACTGG
CTGGATATCCACTCAAGGATTAGAAATATGATCAAATCGGCTTTTGAAGCAGCAGCTGCT
GTGCATCCAGAAATGCATCATAGCAAATCTAGGGCAATGTATGGGGTTGATGTCATGCTT
GATAGTCATTTTCAGCCTAAATTATTGGAGATTACCTACTGCCCAGACTGTACTAGGGCA
GTCACATATGACACTGAAGCTGTCGTCGGTGGAGGAGAAACTGTTAAAGGAAAAGAGTTC
TACAACTATATCTTTGGCTGTCTATTTCTAAATGAAACTAATCATGTTTCCCAATTGTGA