Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048966
CDS Infomation

pacid=37448153 polypeptide=PGSC0003DMP400033090 locus=PGSC0003DMG400019027 ID=PGSC0003DMT400048966.v4.03 annot-version=v4.03
Sequence

ATGCAGGCTCTTGTGTCCTCACCAAATAGCTGTTACATCAATTACACAGGAAGACGAAGA
TTTATACACAATTATCAATATCACACCTCCAAGAATTACCCCTTTTCTTCATCTTCTTCT
TCATCACCCACTAGATCACTTCATTTCTCAAGCACCCATTTTCCTTTTCAATCACAAAAT
CTTATTCTGTATCAAAAACCCATTTCATTAATACCCAGAGGACAGCTTCTGTGTTCAAAT
TCGTCAACTGCCATTACTACTGATGGTGATGACAACAAGAATAAAAGCTTTGGGGATTGG
ATCCAAAGCGTTGGGGAAACGATTTCTGTTTTGTTTCCTTTGTGGGTAGCTTTGGGTTGC
TTGATTGGGCTGCTTAAACCTAGCTCATACAATTGGGTCAAACCTGAATGGACTGTGATG
GGTATTACACTAACGATGCTTGGCATGGGAATGACTCTTACTTTTGATGATCTTCGTGGT
GCTTTAGCGATGCCTAAAGAGTTGTTCTGCGGTTTCGTCCTTCAGTACTCGGTGATGCCT
TTATCAGGATATTTTGTTAGTAAGCTATTAAATTTGCCATCCCATTATGCAGCAGGCTTG
ATATTGGTTGGCTGCTGTCCTGGCGGGACGGCAAGTAACATTGTCACTTACATTGCACGT
GGAAATGTGGCGCTTTCAGTTTTGATGACTGCTGCAAGTACCCTATCTGCTGTGGTGATG
ACTCCTTTTCTAACAGAGAAACTTGCAGGGCAATTTGTCGCAGTTGATGCAGCTGGGCTT
TTCATGTCCACTTTACAGGTGGTGCTTCTTCCTGTATTAGCTGGTGCATTTCTGAATCAG
TATTTCAAAGGCCTTGTCAAATTTGTGTCTCCATTGATGCCACCTATTGCTGTAGCAACT
GTTGCAGTTCTTTGTGGAAATGCAATTGCACAGAGTTCTTCCGCAATCCTTATGTCAGGT
CAACAGGTTGTCATAGCTACTGCTCTTCTTCATGCGTCTGGCTTCTTCTTTGGCTATGTA
CTTTCGAGGATGCTTGGAGTTGATGTATCATCCTCAAGGACAATATCTATTGAAGTCGGC
ATGCAGAACTCGGTTCTTGGAGTAGTTCTAGCCACTCAGCACTTTGGTAATCCACTTACT
GCAGTACCATGTGCAGTTTCTAGTGTTTGCCACTCGATATTTGGCAGTGCCTTGGCTGGC
ATATGGAGGCGTTCTATTCCAGATAAAGTGCAGGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033090
PEP Infomation

pacid=37448153 transcript=PGSC0003DMT400048966 locus=PGSC0003DMG400019027 ID=PGSC0003DMT400048966.v4.03 annot-version=v4.03
Sequence

MQALVSSPNSCYINYTGRRRFIHNYQYHTSKNYPFSSSSSSSPTRSLHFSSTHFPFQSQN
LILYQKPISLIPRGQLLCSNSSTAITTDGDDNKNKSFGDWIQSVGETISVLFPLWVALGC
LIGLLKPSSYNWVKPEWTVMGITLTMLGMGMTLTFDDLRGALAMPKELFCGFVLQYSVMP
LSGYFVSKLLNLPSHYAAGLILVGCCPGGTASNIVTYIARGNVALSVLMTAASTLSAVVM
TPFLTEKLAGQFVAVDAAGLFMSTLQVVLLPVLAGAFLNQYFKGLVKFVSPLMPPIAVAT
VAVLCGNAIAQSSSAILMSGQQVVIATALLHASGFFFGYVLSRMLGVDVSSSRTISIEVG
MQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSIFGSALAGIWRRSIPDKVQD*

Transcript Sequence

Transcript ID

PGSC0003DMT400048966
Transcript Infomation

pacid=37448153 locus=PGSC0003DMG400019027 ID=PGSC0003DMT400048966.v4.03 annot-version=v4.03
Sequence

ATGCAGGCTCTTGTGTCCTCACCAAATAGCTGTTACATCAATTACACAGGAAGACGAAGA
TTTATACACAATTATCAATATCACACCTCCAAGAATTACCCCTTTTCTTCATCTTCTTCT
TCATCACCCACTAGATCACTTCATTTCTCAAGCACCCATTTTCCTTTTCAATCACAAAAT
CTTATTCTGTATCAAAAACCCATTTCATTAATACCCAGAGGACAGCTTCTGTGTTCAAAT
TCGTCAACTGCCATTACTACTGATGGTGATGACAACAAGAATAAAAGCTTTGGGGATTGG
ATCCAAAGCGTTGGGGAAACGATTTCTGTTTTGTTTCCTTTGTGGGTAGCTTTGGGTTGC
TTGATTGGGCTGCTTAAACCTAGCTCATACAATTGGGTCAAACCTGAATGGACTGTGATG
GGTATTACACTAACGATGCTTGGCATGGGAATGACTCTTACTTTTGATGATCTTCGTGGT
GCTTTAGCGATGCCTAAAGAGTTGTTCTGCGGTTTCGTCCTTCAGTACTCGGTGATGCCT
TTATCAGGATATTTTGTTAGTAAGCTATTAAATTTGCCATCCCATTATGCAGCAGGCTTG
ATATTGGTTGGCTGCTGTCCTGGCGGGACGGCAAGTAACATTGTCACTTACATTGCACGT
GGAAATGTGGCGCTTTCAGTTTTGATGACTGCTGCAAGTACCCTATCTGCTGTGGTGATG
ACTCCTTTTCTAACAGAGAAACTTGCAGGGCAATTTGTCGCAGTTGATGCAGCTGGGCTT
TTCATGTCCACTTTACAGGTGGTGCTTCTTCCTGTATTAGCTGGTGCATTTCTGAATCAG
TATTTCAAAGGCCTTGTCAAATTTGTGTCTCCATTGATGCCACCTATTGCTGTAGCAACT
GTTGCAGTTCTTTGTGGAAATGCAATTGCACAGAGTTCTTCCGCAATCCTTATGTCAGGT
CAACAGGTTGTCATAGCTACTGCTCTTCTTCATGCGTCTGGCTTCTTCTTTGGCTATGTA
CTTTCGAGGATGCTTGGAGTTGATGTATCATCCTCAAGGACAATATCTATTGAAGTCGGC
ATGCAGAACTCGGTTCTTGGAGTAGTTCTAGCCACTCAGCACTTTGGTAATCCACTTACT
GCAGTACCATGTGCAGTTTCTAGTGTTTGCCACTCGATATTTGGCAGTGCCTTGGCTGGC
ATATGGAGGCGTTCTATTCCAGATAAAGTGCAGGACTAA