Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048964
CDS Infomation

pacid=37449293 polypeptide=PGSC0003DMP400033088 locus=PGSC0003DMG400019025 ID=PGSC0003DMT400048964.v4.03 annot-version=v4.03
Sequence

ATGAAGATTCAGTGTAATGTGTGTGAGGTAGCAGAGGCAAAAGTATTATGTTGTGCTGAT
GAAGCAGCACTTTGTTGGTATTGTGATGATAAAGTTCATGCTGCAAATAAGCTTGCTAAT
AAGCATCAAAGAGTACCTCTTTCTGCTTCATCTTCACCCATGCCGAAGTGTGACATATGC
CAAGAGACTGTTGGCTTTTTCTTTTGCCTCGAGGATAGGGCTTTGCTCTGCAGAAAATGC
GACATTTCTATTCACACCGTCAATGCTTATGTCTCATCTCACCAGAGGTTCTTGCTGACC
GGAGTCAAAGTGGGACTTGAACCTCTCGGTCCTTCTGCATCAGCATCCTCAGGAAAGTCG
CCTTCTATCCAGAAGGTCGCGGAGCAAGAATCTCCTCCAATTCCGAAGAGTGTTGCTCCT
CTGTCATCAGCTACTCCATCTGAAGGTGTATTACCTGTCCATACTAGTGGGAATGGGAAT
TTTGCACCTAGTAGACTTCCAATGGTTGGAGGTTCTGCAGCTGGAATCATTCCACAATGG
CAATTTGATCAGTATCTTGGAATGGGTGATTTCAATCAGAATTACGGATACATGGATTAT
GGACAATCTAAGGCAGACAACGGAAAGCTTGGAGAATCAGCTAGTTCTCCGTTCTTAAGA
GATGCTGACGCTGAAGTTGCAGGTGACGAGTGCTTTAGCACTGAGGTGGCAGATACATGT
TGGGCAGTCCCACAAATTCCTTCGCCACCAACAGCTTCTGGACTAAACTGGCCGACGAAA
ACTATCCAGAATCCGTTTGATGCTGCATTGTTGGAATCCGATGCTAGTTACTTCCCTTTG
CAGAACATTCAAGATCAACAATCAAATGGTTCCGGTTCCAAAAGGAGTAGGCATTTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400033088
PEP Infomation

pacid=37449293 transcript=PGSC0003DMT400048964 locus=PGSC0003DMG400019025 ID=PGSC0003DMT400048964.v4.03 annot-version=v4.03
Sequence

MKIQCNVCEVAEAKVLCCADEAALCWYCDDKVHAANKLANKHQRVPLSASSSPMPKCDIC
QETVGFFFCLEDRALLCRKCDISIHTVNAYVSSHQRFLLTGVKVGLEPLGPSASASSGKS
PSIQKVAEQESPPIPKSVAPLSSATPSEGVLPVHTSGNGNFAPSRLPMVGGSAAGIIPQW
QFDQYLGMGDFNQNYGYMDYGQSKADNGKLGESASSPFLRDADAEVAGDECFSTEVADTC
WAVPQIPSPPTASGLNWPTKTIQNPFDAALLESDASYFPLQNIQDQQSNGSGSKRSRHF*

Transcript Sequence

Transcript ID

PGSC0003DMT400048964
Transcript Infomation

pacid=37449293 locus=PGSC0003DMG400019025 ID=PGSC0003DMT400048964.v4.03 annot-version=v4.03
Sequence

ATGAAGATTCAGTGTAATGTGTGTGAGGTAGCAGAGGCAAAAGTATTATGTTGTGCTGAT
GAAGCAGCACTTTGTTGGTATTGTGATGATAAAGTTCATGCTGCAAATAAGCTTGCTAAT
AAGCATCAAAGAGTACCTCTTTCTGCTTCATCTTCACCCATGCCGAAGTGTGACATATGC
CAAGAGACTGTTGGCTTTTTCTTTTGCCTCGAGGATAGGGCTTTGCTCTGCAGAAAATGC
GACATTTCTATTCACACCGTCAATGCTTATGTCTCATCTCACCAGAGGTTCTTGCTGACC
GGAGTCAAAGTGGGACTTGAACCTCTCGGTCCTTCTGCATCAGCATCCTCAGGAAAGTCG
CCTTCTATCCAGAAGGTCGCGGAGCAAGAATCTCCTCCAATTCCGAAGAGTGTTGCTCCT
CTGTCATCAGCTACTCCATCTGAAGGTGTATTACCTGTCCATACTAGTGGGAATGGGAAT
TTTGCACCTAGTAGACTTCCAATGGTTGGAGGTTCTGCAGCTGGAATCATTCCACAATGG
CAATTTGATCAGTATCTTGGAATGGGTGATTTCAATCAGAATTACGGATACATGGATTAT
GGACAATCTAAGGCAGACAACGGAAAGCTTGGAGAATCAGCTAGTTCTCCGTTCTTAAGA
GATGCTGACGCTGAAGTTGCAGGTGACGAGTGCTTTAGCACTGAGGTGGCAGATACATGT
TGGGCAGTCCCACAAATTCCTTCGCCACCAACAGCTTCTGGACTAAACTGGCCGACGAAA
ACTATCCAGAATCCGTTTGATGCTGCATTGTTGGAATCCGATGCTAGTTACTTCCCTTTG
CAGAACATTCAAGATCAACAATCAAATGGTTCCGGTTCCAAAAGGAGTAGGCATTTCTAG