Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048941
CDS Infomation

pacid=37451091 polypeptide=PGSC0003DMP400033079 locus=PGSC0003DMG400019017 ID=PGSC0003DMT400048941.v4.03 annot-version=v4.03
Sequence

ATGGAGAGTGGTAATGCATCAATGGAAAATAATGTTAATGATATTGGGCTTATTAATTTC
TTGGACGAGGATAATTTTGAACAATTCATTGAGCTTATTAGGGGTGAAACTGCTGACCCT
ATTGTAAAGTTTTGCCCAAACTATGATTGTGAACATATCACAGGTTGTTTTTCCGCTGCC
AATGCCCAATTTGAGCCAACATCCATGGATTTCTATGATACAACCTTGCCTGATCCTATT
TCCCTATATACTTCGTTTCCCGGTGAAATCAAGCTCGATGATGATGATGATGATGAAGAA
GAAGAGGAAGATTGTGATGAATCTTCTGGCACAACGGCTACCACCAAAATGACTCCAACA
ACCAAAGGCACGAGGACTGACCGGTCGAGAACTTTGATTTCCGAGCGCAAAAGGAGAGGA
AGAATGAAGGAAAAGCTTTACGCTTTGCGATCCTTAGTTCCTAATATCACAAAGATGGAT
AAAGCCTCCATCATAGGAGATGCAATATTATACGTACAAGGACTGCAAACGAAAGCCAAG
AAACTAAAAGTAGAAATAGCAGAGTTTGAGTCATCAATTAATCAAAGTGGACTATTTCAA
AATGCCAAGAAAATGAATTTCACAAGCTATTATCCAGCAATCAAGAGGATAACAAAGATG
GACATTAATCAAGTAGAAGAAAAAGGATTTTACGTGAGATTAATTTGCAACAAAGGGCGA
CAAATTGCAGCTTCTCTTTTCAAAGCTCTTGAGTCTCTCACTGGATTCAATGTTCAAACT
TCCAACTTGGCTACTTCTACCAATGATTACATTTTCACCTTTACTCTTAATGTGAGAGAA
TGTCATGAGGTGGACATAAACTTTGGCAATTTGAAGCTATGGATAGCTAGTGCTTTTCTT
AATCAAGGATTTGACTTCGAGACATCTTCATTGGTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033079
PEP Infomation

pacid=37451091 transcript=PGSC0003DMT400048941 locus=PGSC0003DMG400019017 ID=PGSC0003DMT400048941.v4.03 annot-version=v4.03
Sequence

MESGNASMENNVNDIGLINFLDEDNFEQFIELIRGETADPIVKFCPNYDCEHITGCFSAA
NAQFEPTSMDFYDTTLPDPISLYTSFPGEIKLDDDDDDEEEEEDCDESSGTTATTKMTPT
TKGTRTDRSRTLISERKRRGRMKEKLYALRSLVPNITKMDKASIIGDAILYVQGLQTKAK
KLKVEIAEFESSINQSGLFQNAKKMNFTSYYPAIKRITKMDINQVEEKGFYVRLICNKGR
QIAASLFKALESLTGFNVQTSNLATSTNDYIFTFTLNVRECHEVDINFGNLKLWIASAFL
NQGFDFETSSLV*

Transcript Sequence

Transcript ID

PGSC0003DMT400048941
Transcript Infomation

pacid=37451091 locus=PGSC0003DMG400019017 ID=PGSC0003DMT400048941.v4.03 annot-version=v4.03
Sequence

ATGGAGAGTGGTAATGCATCAATGGAAAATAATGTTAATGATATTGGGCTTATTAATTTC
TTGGACGAGGATAATTTTGAACAATTCATTGAGCTTATTAGGGGTGAAACTGCTGACCCT
ATTGTAAAGTTTTGCCCAAACTATGATTGTGAACATATCACAGGTTGTTTTTCCGCTGCC
AATGCCCAATTTGAGCCAACATCCATGGATTTCTATGATACAACCTTGCCTGATCCTATT
TCCCTATATACTTCGTTTCCCGGTGAAATCAAGCTCGATGATGATGATGATGATGAAGAA
GAAGAGGAAGATTGTGATGAATCTTCTGGCACAACGGCTACCACCAAAATGACTCCAACA
ACCAAAGGCACGAGGACTGACCGGTCGAGAACTTTGATTTCCGAGCGCAAAAGGAGAGGA
AGAATGAAGGAAAAGCTTTACGCTTTGCGATCCTTAGTTCCTAATATCACAAAGATGGAT
AAAGCCTCCATCATAGGAGATGCAATATTATACGTACAAGGACTGCAAACGAAAGCCAAG
AAACTAAAAGTAGAAATAGCAGAGTTTGAGTCATCAATTAATCAAAGTGGACTATTTCAA
AATGCCAAGAAAATGAATTTCACAAGCTATTATCCAGCAATCAAGAGGATAACAAAGATG
GACATTAATCAAGTAGAAGAAAAAGGATTTTACGTGAGATTAATTTGCAACAAAGGGCGA
CAAATTGCAGCTTCTCTTTTCAAAGCTCTTGAGTCTCTCACTGGATTCAATGTTCAAACT
TCCAACTTGGCTACTTCTACCAATGATTACATTTTCACCTTTACTCTTAATGTGAGAGAA
TGTCATGAGGTGGACATAAACTTTGGCAATTTGAAGCTATGGATAGCTAGTGCTTTTCTT
AATCAAGGATTTGACTTCGAGACATCTTCATTGGTCTAA