Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048899
CDS Infomation

pacid=37464104 polypeptide=PGSC0003DMP400033059 locus=PGSC0003DMG400019000 ID=PGSC0003DMT400048899.v4.03 annot-version=v4.03
Sequence

ATGCCACTACAAGCTCCATGTGATCTACAAATCCATGTAAATGGTCAACAAACATTCTTT
CTGCACCAGAAAGTCCTTTCAAGATTCTCTGGGAAGTTAAGGAAGATAATCAAACAAGAA
AAGAAGAAAACTCAGATTAAGAATTCAGGTATTGAGATTCTTGATTTCCCAGGTGGGGCA
GAAGGGTTTGAACTTATTTCAAGATTCTGTTACAACAATGGTAGCAGCAATAACATTAAA
ATCACTGTCTCAAATGTTTGTCTTCTCATTTGCTCTGCAAATTTTCTTGAAATGACAGAA
AAGTTGTCTTGTTGCAATCTTTTGTATAAAGCTGAGACCTTTTTTGAAGGATTGTGTTAT
TGGTCCTGTCATGATATTCTGAAATCCTTAAAAAGCTGTGAAACATTTTTTGATTATGCA
ACTTCTTGTGGGCTGATTCAAAAGCTTATAACTTCACTTGTTGGTACCCTTTTTGGTTCT
TCATGTTCATCAGTTTCCTCTTGTTCATCTTCTGAACAAGTAAAGCCATGTTCTTGGTGG
TTTGAGGAAATGACCATTTTGCCCCCAAAGATGATAGAAGAGTTTTTAAGGACTTTAGGT
GGTTTTGGTAGGGAAAATAACAGCTTACTCCTCACAAGATTCTTGCTTTATTACCTAAAA
ACATCATCCCATTTCAGTAATTGTCAAAATCTGATTTCAAGAAGTGAGTATAGTGGACTT
GCTGACACAGTAGTTCATGGGGTAGTTTTTATGGGGAAAACAACATTTTCTTGCAGAAAT
CTTTTTTGGGTATTGAGAATTGTATCTGGTTTTGGGATTAGCAAAGAATGCAGGGGTTGT
TTGGAGAAACTGATAGGTGGGATGCTTGATCAAGCAACACTAGATGATATTCTTGTTTGT
GGTCACAACAATATTGGTGGTGTTTATGATGTGAATCTTGTAATGAGATTGGTTAGAGTT
TTTGTTCATCATGATAAAGTTACAATATCAAAATTGAGAAAAGTTGCAAGATTGATTGAT
AAGTATTTGAGAGAGATTGCTCCTGACCAAACTCTTAAAATATCAAAGTTTCTTGCTGTT
GCTGAGAGTCTACCAGATTATGCAAGGGATTCTTTTGATGGAGTCTACAGAGCCATTGAT
ATCTATCTTGAGTCTCATCCAATCCTTTCATTAGAGGAAAGATCAAGATTATGTAGATGT
CTCAACTATGAGAAACTAAGCCTTGAAGCATGCAAGGACTTAGCAAAGAATCCAAGAATT
TCACCAAGAATTGCTGTCAAGGCACTTGCTTCTCAATGTTCTTCAAGTATTCCAACAATA
AAAGACAATAATAGCCAAATGGTTTTGTACAAGACAAACAAGAGTGATCATCACAGTTCA
AGTGCTGCTAGTGATCAACAAAGTTTACAAGAAGAGGAACATGAATATATGAGGCTAAAT
TTGCAAAAGATGCAATGGAGAGTTGTGGAGTTGGAGAAAGTATGTAGAGATATGAAAGGT
CAAATGACTAAAATGGTGAAGACAGGGACTCAGACTAGAGCTTTGCCTAGGCTTTGTAGA
AGTCAAAACTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033059
PEP Infomation

pacid=37464104 transcript=PGSC0003DMT400048899 locus=PGSC0003DMG400019000 ID=PGSC0003DMT400048899.v4.03 annot-version=v4.03
Sequence

MPLQAPCDLQIHVNGQQTFFLHQKVLSRFSGKLRKIIKQEKKKTQIKNSGIEILDFPGGA
EGFELISRFCYNNGSSNNIKITVSNVCLLICSANFLEMTEKLSCCNLLYKAETFFEGLCY
WSCHDILKSLKSCETFFDYATSCGLIQKLITSLVGTLFGSSCSSVSSCSSSEQVKPCSWW
FEEMTILPPKMIEEFLRTLGGFGRENNSLLLTRFLLYYLKTSSHFSNCQNLISRSEYSGL
ADTVVHGVVFMGKTTFSCRNLFWVLRIVSGFGISKECRGCLEKLIGGMLDQATLDDILVC
GHNNIGGVYDVNLVMRLVRVFVHHDKVTISKLRKVARLIDKYLREIAPDQTLKISKFLAV
AESLPDYARDSFDGVYRAIDIYLESHPILSLEERSRLCRCLNYEKLSLEACKDLAKNPRI
SPRIAVKALASQCSSSIPTIKDNNSQMVLYKTNKSDHHSSSAASDQQSLQEEEHEYMRLN
LQKMQWRVVELEKVCRDMKGQMTKMVKTGTQTRALPRLCRSQNF*

Transcript Sequence

Transcript ID

PGSC0003DMT400048899
Transcript Infomation

pacid=37464104 locus=PGSC0003DMG400019000 ID=PGSC0003DMT400048899.v4.03 annot-version=v4.03
Sequence

ATGCCACTACAAGCTCCATGTGATCTACAAATCCATGTAAATGGTCAACAAACATTCTTT
CTGCACCAGAAAGTCCTTTCAAGATTCTCTGGGAAGTTAAGGAAGATAATCAAACAAGAA
AAGAAGAAAACTCAGATTAAGAATTCAGGTATTGAGATTCTTGATTTCCCAGGTGGGGCA
GAAGGGTTTGAACTTATTTCAAGATTCTGTTACAACAATGGTAGCAGCAATAACATTAAA
ATCACTGTCTCAAATGTTTGTCTTCTCATTTGCTCTGCAAATTTTCTTGAAATGACAGAA
AAGTTGTCTTGTTGCAATCTTTTGTATAAAGCTGAGACCTTTTTTGAAGGATTGTGTTAT
TGGTCCTGTCATGATATTCTGAAATCCTTAAAAAGCTGTGAAACATTTTTTGATTATGCA
ACTTCTTGTGGGCTGATTCAAAAGCTTATAACTTCACTTGTTGGTACCCTTTTTGGTTCT
TCATGTTCATCAGTTTCCTCTTGTTCATCTTCTGAACAAGTAAAGCCATGTTCTTGGTGG
TTTGAGGAAATGACCATTTTGCCCCCAAAGATGATAGAAGAGTTTTTAAGGACTTTAGGT
GGTTTTGGTAGGGAAAATAACAGCTTACTCCTCACAAGATTCTTGCTTTATTACCTAAAA
ACATCATCCCATTTCAGTAATTGTCAAAATCTGATTTCAAGAAGTGAGTATAGTGGACTT
GCTGACACAGTAGTTCATGGGGTAGTTTTTATGGGGAAAACAACATTTTCTTGCAGAAAT
CTTTTTTGGGTATTGAGAATTGTATCTGGTTTTGGGATTAGCAAAGAATGCAGGGGTTGT
TTGGAGAAACTGATAGGTGGGATGCTTGATCAAGCAACACTAGATGATATTCTTGTTTGT
GGTCACAACAATATTGGTGGTGTTTATGATGTGAATCTTGTAATGAGATTGGTTAGAGTT
TTTGTTCATCATGATAAAGTTACAATATCAAAATTGAGAAAAGTTGCAAGATTGATTGAT
AAGTATTTGAGAGAGATTGCTCCTGACCAAACTCTTAAAATATCAAAGTTTCTTGCTGTT
GCTGAGAGTCTACCAGATTATGCAAGGGATTCTTTTGATGGAGTCTACAGAGCCATTGAT
ATCTATCTTGAGTCTCATCCAATCCTTTCATTAGAGGAAAGATCAAGATTATGTAGATGT
CTCAACTATGAGAAACTAAGCCTTGAAGCATGCAAGGACTTAGCAAAGAATCCAAGAATT
TCACCAAGAATTGCTGTCAAGGCACTTGCTTCTCAATGTTCTTCAAGTATTCCAACAATA
AAAGACAATAATAGCCAAATGGTTTTGTACAAGACAAACAAGAGTGATCATCACAGTTCA
AGTGCTGCTAGTGATCAACAAAGTTTACAAGAAGAGGAACATGAATATATGAGGCTAAAT
TTGCAAAAGATGCAATGGAGAGTTGTGGAGTTGGAGAAAGTATGTAGAGATATGAAAGGT
CAAATGACTAAAATGGTGAAGACAGGGACTCAGACTAGAGCTTTGCCTAGGCTTTGTAGA
AGTCAAAACTTCTAA