Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048873
CDS Infomation

pacid=37436778 polypeptide=PGSC0003DMP400033047 locus=PGSC0003DMG400018991 ID=PGSC0003DMT400048873.v4.03 annot-version=v4.03
Sequence

ATGGACGATCGAACCCTAGAAAAGCTATGTGATAATTTTGATCAAGCAGTTACCATCTCT
GGGGATAATTTGATCAAGGCTGAACCCATTCTAAATGGGGGTGAAACCCCGGAAACTTCT
CCTACTGTTGATGGAGTGAAAGTTGACAGAACTTCTGGTTCAGTGGATGAGAGTAATGCT
TCACATTGTACCGCAGAAGTATGTTCATCATATCAAGAGCGGACTCTTCCAATTCTGGAG
AAGATCGAAGTTAGCAACGAAGTGCTCGAATTGACGAAAGAACAGGCAGCATTATGTAAT
GAAGTCAAGGAGAGCACAAGTGTGGACTCTTTTTCTGGTTCTGAAGCTTTTAGTGCTCCT
CAGCATATGAGTGTTCAACATGAACTTCTAAAAAAGAAGTATGATGAAGAATGCGAACTA
CTGAAGCAGAAGTATACGGAGGAGTGTGTTCAACATGAAGTTCTTAAAAAGAAGTTCGAT
GAAGAGTGTCAACTACTGAAGAAGAAATATTTGGAGGAATGTACTGAAAGAAAGCGTCTA
TACAATGAAGTGATCGAACTCAAAGGAAATATCAGGGTCTTCTGTAGATGTAGACCTTTA
AATGCAGGTGAAATTGTAGATGGATCAACATCGGTGGTCGAATTTGATCCATCTCATGAA
AATGAACTGCAGATCAGTTGTGCAGGTTCCTCTAAAAAGCAGTTTAAGTTTGATTACGTG
TTTAAACCCGAGGACAGCCAAGATGCCGTTTTTTCTCAAACAATGCCCATTGTGACCTCT
GTTTTGGATGGGTATAATGTCTGCATATTTGCCTATGGACAAACTGGAACAGGGAAGACG
TTTACCATGGAAGGGACACCAGAAAATAGGGGAGTCAACTACAGAACTTTAGAGAAGCTA
TTTAGCTTATCTAGTGAGAGAAGCAGTATCATGAAATATGAGTTGTTTGTCAGCATGTTA
GAGGTTTATAATGAGAAAATAAAAGATCTCCTGGTAGAGAACTCAAATCAACCGGTTAAG
AAGTTGGAGATAAAACAATCTGCAGAAGGAACTCAGGACGTTCCAGGACTTGTTGAGGCT
CGTGTATATGGTACAGATGAAGTATGGGAACTGCTCAAGTCCGGAAGTCGGGCAAGATCT
GTTGGATCAACTAGTGCTAACGAACTTAGCAGCCGCTCTCACTGCTTACTGCGGGTGACT
GTTGTGGGAGACAACTTGATTAATGGCCAGAGGACTAGGAGCCACCTTTGGCTTGTTGAC
CTTGCTGGCAGTGAGCGTGTGGGGCGGATAGCAGTTGAAGGCGAGAGGTTGAAAGAGTCA
CAATTCATAAACAAGTCATTATCTGCACTTGGGGATGTCATTTCTGCACTAGCCTCTAAG
ACATCTCATATTCCATACAGGAATTCAAAGCTCACACATATGCTGCAGAGCTCTCTGGGG
GGAGATTGCAAAGCAGTCATGTTTGTCCAAATCAGCCCTAATAACACAGATTTGGGAGAA
ACTCTATGCTCGCTGAATTTTGCTAGTCGAGTTCGAGGAGTTGAGCACGGCCCTGCTCGC
AAACAGACAGACCTTGCAGAGCTTATGAAGCATAAACTACTGGCAGAAAAAGCGAAGCAT
GATGAGAAGGAAACCAAAAAATTGCAGGACAATTTGCAGTCTCTGCAGCTGAGACTTGCT
ACCAGAGAACAGACGTGCCGAAGTCTTCAGGATAAGGTTCGTGATCTGGAAAACCAATTG
GCAGAGGAGAGGAAAATACGTCTAAAGCAGGAAAGCAAGGCTTTAGCTGGAGCTTCTCGT
GAGTTCACAACCTCGTCATATTTAAGCCAACCACAGAAGATAACAACAGAGAAGAAACCA
CCACTGGCTCCTTCAAAAGCACTGAGACTGCCTTTGAGAAAAATCAGCAATTTTGTGCCC
CCTCCATCCCCTCTTGCTCGTCCTCCTGCAAAAACTAGGAAGTCCTTTGTGCCAGCGGCA
TCACATGACAAGGAAAATATAGAAAGAACATCAATGACAAAGGCAGTTTTGAAACCAAGG
CGAGGATCTATTATTGCAGTTAGACCACCACCTCAAGGAACAAACCAGGTTTTCCAGCCC
AAAAGACGGGCTTCTATTGCAACCCTTCGCCCTGAGTCTAGCATTTCAACTTTCAATAAC
TCTGCTGCTCGACCAAGGAATGACCGGTTCATTGGTCGGCAATCATTTGTCTGGGATCCA
CAAAGAATGTGGCGTACATCTAGAATGCTTTCTCCAATAGCACAGGCAAAGGAAACATCT
ATTGCAACACCAGTAGGGGAAACCCCAATTGGTTCACGAAGCAGTAAATTCATGGGAAGT
CCTCCTTCACAAGTACCAGGTTCATGGAGGCCCAAGCATCCAACAGTTGTTGCATTAAAG
AAGCAATTGGTGTGGAGTCCTCTGAAGAAGGTCGCGAGAAGTAGCAATAGGAAGTCCTTG
TATTCTTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033047
PEP Infomation

pacid=37436778 transcript=PGSC0003DMT400048873 locus=PGSC0003DMG400018991 ID=PGSC0003DMT400048873.v4.03 annot-version=v4.03
Sequence

MDDRTLEKLCDNFDQAVTISGDNLIKAEPILNGGETPETSPTVDGVKVDRTSGSVDESNA
SHCTAEVCSSYQERTLPILEKIEVSNEVLELTKEQAALCNEVKESTSVDSFSGSEAFSAP
QHMSVQHELLKKKYDEECELLKQKYTEECVQHEVLKKKFDEECQLLKKKYLEECTERKRL
YNEVIELKGNIRVFCRCRPLNAGEIVDGSTSVVEFDPSHENELQISCAGSSKKQFKFDYV
FKPEDSQDAVFSQTMPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPENRGVNYRTLEKL
FSLSSERSSIMKYELFVSMLEVYNEKIKDLLVENSNQPVKKLEIKQSAEGTQDVPGLVEA
RVYGTDEVWELLKSGSRARSVGSTSANELSSRSHCLLRVTVVGDNLINGQRTRSHLWLVD
LAGSERVGRIAVEGERLKESQFINKSLSALGDVISALASKTSHIPYRNSKLTHMLQSSLG
GDCKAVMFVQISPNNTDLGETLCSLNFASRVRGVEHGPARKQTDLAELMKHKLLAEKAKH
DEKETKKLQDNLQSLQLRLATREQTCRSLQDKVRDLENQLAEERKIRLKQESKALAGASR
EFTTSSYLSQPQKITTEKKPPLAPSKALRLPLRKISNFVPPPSPLARPPAKTRKSFVPAA
SHDKENIERTSMTKAVLKPRRGSIIAVRPPPQGTNQVFQPKRRASIATLRPESSISTFNN
SAARPRNDRFIGRQSFVWDPQRMWRTSRMLSPIAQAKETSIATPVGETPIGSRSSKFMGS
PPSQVPGSWRPKHPTVVALKKQLVWSPLKKVARSSNRKSLYSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400048873
Transcript Infomation

pacid=37436778 locus=PGSC0003DMG400018991 ID=PGSC0003DMT400048873.v4.03 annot-version=v4.03
Sequence

ATGGACGATCGAACCCTAGAAAAGCTATGTGATAATTTTGATCAAGCAGTTACCATCTCT
GGGGATAATTTGATCAAGGCTGAACCCATTCTAAATGGGGGTGAAACCCCGGAAACTTCT
CCTACTGTTGATGGAGTGAAAGTTGACAGAACTTCTGGTTCAGTGGATGAGAGTAATGCT
TCACATTGTACCGCAGAAGTATGTTCATCATATCAAGAGCGGACTCTTCCAATTCTGGAG
AAGATCGAAGTTAGCAACGAAGTGCTCGAATTGACGAAAGAACAGGCAGCATTATGTAAT
GAAGTCAAGGAGAGCACAAGTGTGGACTCTTTTTCTGGTTCTGAAGCTTTTAGTGCTCCT
CAGCATATGAGTGTTCAACATGAACTTCTAAAAAAGAAGTATGATGAAGAATGCGAACTA
CTGAAGCAGAAGTATACGGAGGAGTGTGTTCAACATGAAGTTCTTAAAAAGAAGTTCGAT
GAAGAGTGTCAACTACTGAAGAAGAAATATTTGGAGGAATGTACTGAAAGAAAGCGTCTA
TACAATGAAGTGATCGAACTCAAAGGAAATATCAGGGTCTTCTGTAGATGTAGACCTTTA
AATGCAGGTGAAATTGTAGATGGATCAACATCGGTGGTCGAATTTGATCCATCTCATGAA
AATGAACTGCAGATCAGTTGTGCAGGTTCCTCTAAAAAGCAGTTTAAGTTTGATTACGTG
TTTAAACCCGAGGACAGCCAAGATGCCGTTTTTTCTCAAACAATGCCCATTGTGACCTCT
GTTTTGGATGGGTATAATGTCTGCATATTTGCCTATGGACAAACTGGAACAGGGAAGACG
TTTACCATGGAAGGGACACCAGAAAATAGGGGAGTCAACTACAGAACTTTAGAGAAGCTA
TTTAGCTTATCTAGTGAGAGAAGCAGTATCATGAAATATGAGTTGTTTGTCAGCATGTTA
GAGGTTTATAATGAGAAAATAAAAGATCTCCTGGTAGAGAACTCAAATCAACCGGTTAAG
AAGTTGGAGATAAAACAATCTGCAGAAGGAACTCAGGACGTTCCAGGACTTGTTGAGGCT
CGTGTATATGGTACAGATGAAGTATGGGAACTGCTCAAGTCCGGAAGTCGGGCAAGATCT
GTTGGATCAACTAGTGCTAACGAACTTAGCAGCCGCTCTCACTGCTTACTGCGGGTGACT
GTTGTGGGAGACAACTTGATTAATGGCCAGAGGACTAGGAGCCACCTTTGGCTTGTTGAC
CTTGCTGGCAGTGAGCGTGTGGGGCGGATAGCAGTTGAAGGCGAGAGGTTGAAAGAGTCA
CAATTCATAAACAAGTCATTATCTGCACTTGGGGATGTCATTTCTGCACTAGCCTCTAAG
ACATCTCATATTCCATACAGGAATTCAAAGCTCACACATATGCTGCAGAGCTCTCTGGGG
GGAGATTGCAAAGCAGTCATGTTTGTCCAAATCAGCCCTAATAACACAGATTTGGGAGAA
ACTCTATGCTCGCTGAATTTTGCTAGTCGAGTTCGAGGAGTTGAGCACGGCCCTGCTCGC
AAACAGACAGACCTTGCAGAGCTTATGAAGCATAAACTACTGGCAGAAAAAGCGAAGCAT
GATGAGAAGGAAACCAAAAAATTGCAGGACAATTTGCAGTCTCTGCAGCTGAGACTTGCT
ACCAGAGAACAGACGTGCCGAAGTCTTCAGGATAAGGTTCGTGATCTGGAAAACCAATTG
GCAGAGGAGAGGAAAATACGTCTAAAGCAGGAAAGCAAGGCTTTAGCTGGAGCTTCTCGT
GAGTTCACAACCTCGTCATATTTAAGCCAACCACAGAAGATAACAACAGAGAAGAAACCA
CCACTGGCTCCTTCAAAAGCACTGAGACTGCCTTTGAGAAAAATCAGCAATTTTGTGCCC
CCTCCATCCCCTCTTGCTCGTCCTCCTGCAAAAACTAGGAAGTCCTTTGTGCCAGCGGCA
TCACATGACAAGGAAAATATAGAAAGAACATCAATGACAAAGGCAGTTTTGAAACCAAGG
CGAGGATCTATTATTGCAGTTAGACCACCACCTCAAGGAACAAACCAGGTTTTCCAGCCC
AAAAGACGGGCTTCTATTGCAACCCTTCGCCCTGAGTCTAGCATTTCAACTTTCAATAAC
TCTGCTGCTCGACCAAGGAATGACCGGTTCATTGGTCGGCAATCATTTGTCTGGGATCCA
CAAAGAATGTGGCGTACATCTAGAATGCTTTCTCCAATAGCACAGGCAAAGGAAACATCT
ATTGCAACACCAGTAGGGGAAACCCCAATTGGTTCACGAAGCAGTAAATTCATGGGAAGT
CCTCCTTCACAAGTACCAGGTTCATGGAGGCCCAAGCATCCAACAGTTGTTGCATTAAAG
AAGCAATTGGTGTGGAGTCCTCTGAAGAAGGTCGCGAGAAGTAGCAATAGGAAGTCCTTG
TATTCTTCTTAA