Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048825
CDS Infomation

pacid=37435177 polypeptide=PGSC0003DMP400033023 locus=PGSC0003DMG400018971 ID=PGSC0003DMT400048825.v4.03 annot-version=v4.03
Sequence

ATGGCAGATTCACCGCCAACGTTGCCAGTAACACGAAAACAAAGTTCATTTCCGTTACCA
CCACCACCATTGCAAATTCGAGATAATAGCCCTCGAATATCAGAGTTAAGGAAAAGTCTA
TTTTCACCTTCATTGCGAACACCAACATTCGGAAGTACTCAAAAATCTATGTTGTTTTTG
GCTTATGTTTTCACTTTTTTATTTGTTACATGTGCTATCTTTTTTGTATTCAATAATCCT
TCAATCAATCATTCTTTTAGAAAAGTCCTGAATAGTAGGAGATCACATTTTTCCACAATT
TTCTCACATTATTTTCATTCTGATCATCAAAACTCAACTGTTTACTCTCTTCCATTTACA
AATAATGATTCTTCAATTTCTCAAAATGGTTTTATTGCAATTTCACCTAGTCAAAGGAAT
GATTACTCTGAAAATGGTTTACAGAGTTCCATGAAAAATGATCCTAGTAGTAAAAGAGAA
GAAGAAGAGATACAAAAGGCGAATTTGTTGTCGAATTCAGAGAAAAATGATCAGTTTTTG
AAGAATGAAGGTAAATCTAGTAGTAAAAAAGAGGAGGAAGAGAGACAAAAGGTGAATGTG
TCGTTGAATTCGGAGAAAAATGATCAGGCTTTGACGAATGAAGGTAAATCTGGTAGTAAA
AGAGAAGAGGAAGAGACACAAAAGGTGAATTTGTCGTCGAATTTGGAGAACAATGATCAG
TTTTTGAAGAATGAAGGTAAATCTAGTAGTAAAAGAGAAGAGGAAGAGACACAAAAGGTG
AATTTGTTGTCGAATTCGGAGAAAAATGATCAGGTTTTGAAGAATGAAGGTAAATCTAGT
AGTAAAAGAGAAGAGAAAGAGAGCCAAAAGGTGAATTTATCGTCGAATTTGGAGAAAAAT
GAGACAAAGAAAGAGGCTTGGTGGGAAGTGATGAGTCATTGTGATGTTTTTGATGGAATG
TGGGTGAAAGATGATGCTAACCCTATGTATGAACCTGGTTCTTGTCCTTTTATTGATGAG
CCATTTGATTGTTATCAAAATGGAAGACCTGATAATGGTTATCAGAGCTTTAGATGGCAG
CCTAAGCACTGTAATATTCCAAGGTTGGATGCCAAAGAAATGTTGGAACTTTTGAGAGGA
AAGCGATTAGTCTATGTCGGTGACTCTCTGAACAGGAATATGTGGGAATCAATGGTTTGT
CTGCTCAGAAATTCTGTTGAAGACAAGAATAGAGTTTTTGAGGTATCTGGAAGAGAAGAT
TTCAAGAAAGAGGGTGCTTATTCTTTTATATTCGCGGATTATAATTGTTCCGTTGAGTTT
GTACGTTCTACATTTCTCGTTCAAGAATGGGAAATTCCAGATGGGAATGGATCAACTAAA
GAAACACTCAGATTAGATTTGGTAGAAAGGTCATGTGACAAATACAAAGGAGCCGACGTC
CTTGTCTTTAACACAGGACACTGGTGGACTCATGAGAAAACATCTGAAGGGAAGGGTTAC
TATCAAGAAGGTGGCCATGTTTATGGTGAACTAAACGTTGTTGAGGCATTTCGCAAGGCA
ATGACAACATGGGCAAGATGGATTGAGGCCAATGTAGATCCTCAGAAGACAGATGTTTTC
TTTAGAGGCTATTCAGTCTCTCATTTCAGTGGAGGTGAGTGGTATGCTGGTGGAAAATGT
GATAGTGACACCGAACCACTTCAGGATGAGAAAGATTTGTCACCTTCTCTGTATCCACCA
ATAATGGGAATGCTAGAAGATGTGATAAAGTGGATGAAGTCACCAGTACACTATTTGAAT
GTTACCATAATGTCAGACTTCCGCAAGGATGGACATCCATCGGTATACAGGAAGCCAAAC
ATGACAGATGAGGAGAGAAGGACGACGTTAAGGTACCAAGATTGCAGCCATTGGTGCCTT
CCTGGTGTACCAGACACCTGGAATGAGCTTCTATATGCACAACTATTGATGAAACATTAT
CAGCAACAACACAAACAACAACAGCAGCAGATAGGTTCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400033023
PEP Infomation

pacid=37435177 transcript=PGSC0003DMT400048825 locus=PGSC0003DMG400018971 ID=PGSC0003DMT400048825.v4.03 annot-version=v4.03
Sequence

MADSPPTLPVTRKQSSFPLPPPPLQIRDNSPRISELRKSLFSPSLRTPTFGSTQKSMLFL
AYVFTFLFVTCAIFFVFNNPSINHSFRKVLNSRRSHFSTIFSHYFHSDHQNSTVYSLPFT
NNDSSISQNGFIAISPSQRNDYSENGLQSSMKNDPSSKREEEEIQKANLLSNSEKNDQFL
KNEGKSSSKKEEEERQKVNVSLNSEKNDQALTNEGKSGSKREEEETQKVNLSSNLENNDQ
FLKNEGKSSSKREEEETQKVNLLSNSEKNDQVLKNEGKSSSKREEKESQKVNLSSNLEKN
ETKKEAWWEVMSHCDVFDGMWVKDDANPMYEPGSCPFIDEPFDCYQNGRPDNGYQSFRWQ
PKHCNIPRLDAKEMLELLRGKRLVYVGDSLNRNMWESMVCLLRNSVEDKNRVFEVSGRED
FKKEGAYSFIFADYNCSVEFVRSTFLVQEWEIPDGNGSTKETLRLDLVERSCDKYKGADV
LVFNTGHWWTHEKTSEGKGYYQEGGHVYGELNVVEAFRKAMTTWARWIEANVDPQKTDVF
FRGYSVSHFSGGEWYAGGKCDSDTEPLQDEKDLSPSLYPPIMGMLEDVIKWMKSPVHYLN
VTIMSDFRKDGHPSVYRKPNMTDEERRTTLRYQDCSHWCLPGVPDTWNELLYAQLLMKHY
QQQHKQQQQQIGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400048825
Transcript Infomation

pacid=37435177 locus=PGSC0003DMG400018971 ID=PGSC0003DMT400048825.v4.03 annot-version=v4.03
Sequence

ATGGCAGATTCACCGCCAACGTTGCCAGTAACACGAAAACAAAGTTCATTTCCGTTACCA
CCACCACCATTGCAAATTCGAGATAATAGCCCTCGAATATCAGAGTTAAGGAAAAGTCTA
TTTTCACCTTCATTGCGAACACCAACATTCGGAAGTACTCAAAAATCTATGTTGTTTTTG
GCTTATGTTTTCACTTTTTTATTTGTTACATGTGCTATCTTTTTTGTATTCAATAATCCT
TCAATCAATCATTCTTTTAGAAAAGTCCTGAATAGTAGGAGATCACATTTTTCCACAATT
TTCTCACATTATTTTCATTCTGATCATCAAAACTCAACTGTTTACTCTCTTCCATTTACA
AATAATGATTCTTCAATTTCTCAAAATGGTTTTATTGCAATTTCACCTAGTCAAAGGAAT
GATTACTCTGAAAATGGTTTACAGAGTTCCATGAAAAATGATCCTAGTAGTAAAAGAGAA
GAAGAAGAGATACAAAAGGCGAATTTGTTGTCGAATTCAGAGAAAAATGATCAGTTTTTG
AAGAATGAAGGTAAATCTAGTAGTAAAAAAGAGGAGGAAGAGAGACAAAAGGTGAATGTG
TCGTTGAATTCGGAGAAAAATGATCAGGCTTTGACGAATGAAGGTAAATCTGGTAGTAAA
AGAGAAGAGGAAGAGACACAAAAGGTGAATTTGTCGTCGAATTTGGAGAACAATGATCAG
TTTTTGAAGAATGAAGGTAAATCTAGTAGTAAAAGAGAAGAGGAAGAGACACAAAAGGTG
AATTTGTTGTCGAATTCGGAGAAAAATGATCAGGTTTTGAAGAATGAAGGTAAATCTAGT
AGTAAAAGAGAAGAGAAAGAGAGCCAAAAGGTGAATTTATCGTCGAATTTGGAGAAAAAT
GAGACAAAGAAAGAGGCTTGGTGGGAAGTGATGAGTCATTGTGATGTTTTTGATGGAATG
TGGGTGAAAGATGATGCTAACCCTATGTATGAACCTGGTTCTTGTCCTTTTATTGATGAG
CCATTTGATTGTTATCAAAATGGAAGACCTGATAATGGTTATCAGAGCTTTAGATGGCAG
CCTAAGCACTGTAATATTCCAAGGTTGGATGCCAAAGAAATGTTGGAACTTTTGAGAGGA
AAGCGATTAGTCTATGTCGGTGACTCTCTGAACAGGAATATGTGGGAATCAATGGTTTGT
CTGCTCAGAAATTCTGTTGAAGACAAGAATAGAGTTTTTGAGGTATCTGGAAGAGAAGAT
TTCAAGAAAGAGGGTGCTTATTCTTTTATATTCGCGGATTATAATTGTTCCGTTGAGTTT
GTACGTTCTACATTTCTCGTTCAAGAATGGGAAATTCCAGATGGGAATGGATCAACTAAA
GAAACACTCAGATTAGATTTGGTAGAAAGGTCATGTGACAAATACAAAGGAGCCGACGTC
CTTGTCTTTAACACAGGACACTGGTGGACTCATGAGAAAACATCTGAAGGGAAGGGTTAC
TATCAAGAAGGTGGCCATGTTTATGGTGAACTAAACGTTGTTGAGGCATTTCGCAAGGCA
ATGACAACATGGGCAAGATGGATTGAGGCCAATGTAGATCCTCAGAAGACAGATGTTTTC
TTTAGAGGCTATTCAGTCTCTCATTTCAGTGGAGGTGAGTGGTATGCTGGTGGAAAATGT
GATAGTGACACCGAACCACTTCAGGATGAGAAAGATTTGTCACCTTCTCTGTATCCACCA
ATAATGGGAATGCTAGAAGATGTGATAAAGTGGATGAAGTCACCAGTACACTATTTGAAT
GTTACCATAATGTCAGACTTCCGCAAGGATGGACATCCATCGGTATACAGGAAGCCAAAC
ATGACAGATGAGGAGAGAAGGACGACGTTAAGGTACCAAGATTGCAGCCATTGGTGCCTT
CCTGGTGTACCAGACACCTGGAATGAGCTTCTATATGCACAACTATTGATGAAACATTAT
CAGCAACAACACAAACAACAACAGCAGCAGATAGGTTCTTAG