Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048796
CDS Infomation

pacid=37448292 polypeptide=PGSC0003DMP400033008 locus=PGSC0003DMG402018962 ID=PGSC0003DMT400048796.v4.03 annot-version=v4.03
Sequence

ATGTGGAAATTGAAGATTGCTGAAGGGCAAAAAGGGCCATATTTGTACAGCACAAACAAC
TATGTTGGACGACAAACGTGGGAGTTCGATCCAAATGCTGGAACGATAGAAGAACGGGCT
GAGATAGAAGAGGCCCGCCAACAATTTTGGAATAATCGTTATAAAGTCAAGCCTAGTAGT
GATCTTCTTTGGCGAATGCAGTTTCTTGGAGAGAAAAATTTCAAACAAATAATTCCAGCA
GTAAAAGTTGAAGAAGATGAAGAAATTAGTCATGAAGTTGCTACAATTGCATTGCATAGA
GCAGTTAATTTCTTCTCAGCTTTACAGGCTAGTGATGGTCATTGGCCTGCTGAAAATGCT
GGTCCTTTGTTTTTTCTTCCACCTTTGGTCATGTGTATGTATATCACTGGGCATCTTAAT
ACTGTATTCCCAGCTGAACATCGAAAGGAAATTCTTCGGTATTTATATTGTCATCAGAAC
GAAGATGGTGGATGGGGTTTGCACATAGAAGGCCACAGTACTATGTTCTGTACAGCTCTG
AGTTACATTTGCATGAGGATCCTTGGAGAAGGACCAGATGGCGGTGTAAATAATGCGTGT
GCTAGAGCAAGGAAATGGATTCTTGATCATGGTAGTGTCACCGCAATTCCTTCTTGGGGA
AAAACATGGCTCTCGATTCTTGGAGTTTTTGAATGGATAGGAACCAATCCAATGCCACCT
GAGTTTTGGATTCTTCCATCTTTTCTTCCCGTGCATCCAGCAAAAATGTGGTGTTACTGT
CGAATGGTCTACATGCCGATGTCTTACCTCTATGGGAAGAGATTTGTTGGTCCAATCACG
CCTCTCATTTTGCAACTGAGGGAAGAGTTATATGATCAACCATACAATGAAATTAACTGG
AAAAAAGTGCGCCATGTATGTGCAAAGGAGGATCTCTATTACCCTCATCCATTGGTTCAA
GATTTGATGTGGGACAGTCTCTACATATGTACCGAGCCTCTATTGACCCGTTGGCCTTTC
AACAAGCTGAGAAACAAAGCTCTTGAAGTTACCATGAAACACATACACTATGAAGACGAG
AATAGTCGATACATCACCATTGGATGTGTCGAAAAAGTATTGTGCATGCTTGCTTGTTGG
GTCGAGGATCCTAACGGCGATTATTTCAAAAAACATCTTGCTAGGATCCCTGATTATTTA
TGGGTAGCTGAAGATGGAATGAAAATGCAGAGTTTTGGTAGTCAAGAATGGGATACCGGT
TTTGCTATTCAAGCACTATTGGCCAGTGAGATGAATGATGAGATAGCAGATACTCTTAGG
AAAGGACATGACTTTATAAAACAATCTCAGGTGACGGACAATCCTTCTGGTGATTTCAAA
GGGATGTATCGACATATCTCAAAAGGATCGTGGACTTTTTCAGATCAAGATCATGGATGG
CAAGTCTCTGATTGCACTGCTGAAGCATTAAAGTGCTGCCTTCTGTTCTCTACAATGCCT
CGTGAATTAGTCGGTCAGGCAATGGAACCAGGGCGACTGTATGACTCGGTGAATGTTATT
CTTTCATTACAGAGCAAAAATGGCGGTTTAGCAGCATGGGAACCTGCAGGAGCCTCTGAG
TATTTGGAGCTGCTCAATCCTACTGAATTTTTTGCGGACATTGTCATTGAGCATGAGTAT
GTCGAATGCACTGCCTCATCAATTCAAGCACTTGTTCTGTTTAAGAAGCTGTACCCCGGA
CACAGAACCAAGGAGATTAACATATTCATTGATAATGCTGTTAAATATCTTGAAGATGTA
CAAATGCCTGATGGTTCATGGTATGGTAACTGGGGTGTTTGCTTCACATATGGTTCCTGG
TTTGCTCTTGGAGGGCTTGCTGCAGCAGGCAAGTCCTACAACAACTGTGCAGCTGTTCGT
AAAGGCGTTGAATTTCTGCTAAGAACACAAAGGTCCGATGGTGGTTGGGGTGAAAGCTAC
CGTTCTTGCCCAGACAAGGTATATAGGGAACTCGAAACAAATGACTCAAATCTTGTACAA
ACTGCATGGGCATTGATGGGATTGATTCACTCTGGCCAGGTTGATAGAGATCCAAGGCCC
CTCCACCGCGCAGCAAAGCTGTTGATTAATTCTCAGATGGAAGATGGTGACTTCCCACAG
CAGGAAATTACTGGAGTTTTTATGAAGAATTGCATGTTGCATTATGCAGCATACAGAAAT
ATATATCCATTATGGGGTTTGGCAGAATATCGCAAAAATGTCCTATTACCATTAGAAAAC
AACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033008
PEP Infomation

pacid=37448292 transcript=PGSC0003DMT400048796 locus=PGSC0003DMG402018962 ID=PGSC0003DMT400048796.v4.03 annot-version=v4.03
Sequence

MWKLKIAEGQKGPYLYSTNNYVGRQTWEFDPNAGTIEERAEIEEARQQFWNNRYKVKPSS
DLLWRMQFLGEKNFKQIIPAVKVEEDEEISHEVATIALHRAVNFFSALQASDGHWPAENA
GPLFFLPPLVMCMYITGHLNTVFPAEHRKEILRYLYCHQNEDGGWGLHIEGHSTMFCTAL
SYICMRILGEGPDGGVNNACARARKWILDHGSVTAIPSWGKTWLSILGVFEWIGTNPMPP
EFWILPSFLPVHPAKMWCYCRMVYMPMSYLYGKRFVGPITPLILQLREELYDQPYNEINW
KKVRHVCAKEDLYYPHPLVQDLMWDSLYICTEPLLTRWPFNKLRNKALEVTMKHIHYEDE
NSRYITIGCVEKVLCMLACWVEDPNGDYFKKHLARIPDYLWVAEDGMKMQSFGSQEWDTG
FAIQALLASEMNDEIADTLRKGHDFIKQSQVTDNPSGDFKGMYRHISKGSWTFSDQDHGW
QVSDCTAEALKCCLLFSTMPRELVGQAMEPGRLYDSVNVILSLQSKNGGLAAWEPAGASE
YLELLNPTEFFADIVIEHEYVECTASSIQALVLFKKLYPGHRTKEINIFIDNAVKYLEDV
QMPDGSWYGNWGVCFTYGSWFALGGLAAAGKSYNNCAAVRKGVEFLLRTQRSDGGWGESY
RSCPDKVYRELETNDSNLVQTAWALMGLIHSGQVDRDPRPLHRAAKLLINSQMEDGDFPQ
QEITGVFMKNCMLHYAAYRNIYPLWGLAEYRKNVLLPLENN*

Transcript Sequence

Transcript ID

PGSC0003DMT400048796
Transcript Infomation

pacid=37448292 locus=PGSC0003DMG402018962 ID=PGSC0003DMT400048796.v4.03 annot-version=v4.03
Sequence

ATGTGGAAATTGAAGATTGCTGAAGGGCAAAAAGGGCCATATTTGTACAGCACAAACAAC
TATGTTGGACGACAAACGTGGGAGTTCGATCCAAATGCTGGAACGATAGAAGAACGGGCT
GAGATAGAAGAGGCCCGCCAACAATTTTGGAATAATCGTTATAAAGTCAAGCCTAGTAGT
GATCTTCTTTGGCGAATGCAGTTTCTTGGAGAGAAAAATTTCAAACAAATAATTCCAGCA
GTAAAAGTTGAAGAAGATGAAGAAATTAGTCATGAAGTTGCTACAATTGCATTGCATAGA
GCAGTTAATTTCTTCTCAGCTTTACAGGCTAGTGATGGTCATTGGCCTGCTGAAAATGCT
GGTCCTTTGTTTTTTCTTCCACCTTTGGTCATGTGTATGTATATCACTGGGCATCTTAAT
ACTGTATTCCCAGCTGAACATCGAAAGGAAATTCTTCGGTATTTATATTGTCATCAGAAC
GAAGATGGTGGATGGGGTTTGCACATAGAAGGCCACAGTACTATGTTCTGTACAGCTCTG
AGTTACATTTGCATGAGGATCCTTGGAGAAGGACCAGATGGCGGTGTAAATAATGCGTGT
GCTAGAGCAAGGAAATGGATTCTTGATCATGGTAGTGTCACCGCAATTCCTTCTTGGGGA
AAAACATGGCTCTCGATTCTTGGAGTTTTTGAATGGATAGGAACCAATCCAATGCCACCT
GAGTTTTGGATTCTTCCATCTTTTCTTCCCGTGCATCCAGCAAAAATGTGGTGTTACTGT
CGAATGGTCTACATGCCGATGTCTTACCTCTATGGGAAGAGATTTGTTGGTCCAATCACG
CCTCTCATTTTGCAACTGAGGGAAGAGTTATATGATCAACCATACAATGAAATTAACTGG
AAAAAAGTGCGCCATGTATGTGCAAAGGAGGATCTCTATTACCCTCATCCATTGGTTCAA
GATTTGATGTGGGACAGTCTCTACATATGTACCGAGCCTCTATTGACCCGTTGGCCTTTC
AACAAGCTGAGAAACAAAGCTCTTGAAGTTACCATGAAACACATACACTATGAAGACGAG
AATAGTCGATACATCACCATTGGATGTGTCGAAAAAGTATTGTGCATGCTTGCTTGTTGG
GTCGAGGATCCTAACGGCGATTATTTCAAAAAACATCTTGCTAGGATCCCTGATTATTTA
TGGGTAGCTGAAGATGGAATGAAAATGCAGAGTTTTGGTAGTCAAGAATGGGATACCGGT
TTTGCTATTCAAGCACTATTGGCCAGTGAGATGAATGATGAGATAGCAGATACTCTTAGG
AAAGGACATGACTTTATAAAACAATCTCAGGTGACGGACAATCCTTCTGGTGATTTCAAA
GGGATGTATCGACATATCTCAAAAGGATCGTGGACTTTTTCAGATCAAGATCATGGATGG
CAAGTCTCTGATTGCACTGCTGAAGCATTAAAGTGCTGCCTTCTGTTCTCTACAATGCCT
CGTGAATTAGTCGGTCAGGCAATGGAACCAGGGCGACTGTATGACTCGGTGAATGTTATT
CTTTCATTACAGAGCAAAAATGGCGGTTTAGCAGCATGGGAACCTGCAGGAGCCTCTGAG
TATTTGGAGCTGCTCAATCCTACTGAATTTTTTGCGGACATTGTCATTGAGCATGAGTAT
GTCGAATGCACTGCCTCATCAATTCAAGCACTTGTTCTGTTTAAGAAGCTGTACCCCGGA
CACAGAACCAAGGAGATTAACATATTCATTGATAATGCTGTTAAATATCTTGAAGATGTA
CAAATGCCTGATGGTTCATGGTATGGTAACTGGGGTGTTTGCTTCACATATGGTTCCTGG
TTTGCTCTTGGAGGGCTTGCTGCAGCAGGCAAGTCCTACAACAACTGTGCAGCTGTTCGT
AAAGGCGTTGAATTTCTGCTAAGAACACAAAGGTCCGATGGTGGTTGGGGTGAAAGCTAC
CGTTCTTGCCCAGACAAGGTATATAGGGAACTCGAAACAAATGACTCAAATCTTGTACAA
ACTGCATGGGCATTGATGGGATTGATTCACTCTGGCCAGGTTGATAGAGATCCAAGGCCC
CTCCACCGCGCAGCAAAGCTGTTGATTAATTCTCAGATGGAAGATGGTGACTTCCCACAG
CAGGAAATTACTGGAGTTTTTATGAAGAATTGCATGTTGCATTATGCAGCATACAGAAAT
ATATATCCATTATGGGGTTTGGCAGAATATCGCAAAAATGTCCTATTACCATTAGAAAAC
AACTAA