Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048757
CDS Infomation

pacid=37458433 polypeptide=PGSC0003DMP400032990 locus=PGSC0003DMG400018950 ID=PGSC0003DMT400048757.v4.03 annot-version=v4.03
Sequence

ATGAATCATTCTGTTCCTGATTTTGATATGGATGATGACTACTCTCTTCCTGCTTCTTCT
GGTCTTACCAGAACTAAGAAGTCCGCAATGGCGGAGGAGGAAATCATGGAACTACTGTGG
CAAAATGGTCAAGTGGTTATGCAGAGTCAGAATCAAAGATCTCTTAAGAAATCTCACATC
GGTAACGGCAGTGGAGGCGGTGGTGATGCGGTTATTCCCTCTGACCAAGCTGTCGGTAGA
GAGATCCGACATGTAGAGGAAACTACTCCACATCATCTGTTTATGCAGGAGGATGAGATG
GCCTCATGGCTTCACTACCCACTTGATGACCCCTCCTTCGAACGTGATCTCTACTCCGAT
CTCCTATATCCCACACCGACTTCTACCTTAACCACCGCCACGCTGCCACGAGATAACCGT
ACGTCTACGTTGGAGATCCGTCCACCTCCGCCACAACCATCGCCAGCAGCGCCGATCGGA
ACGGCTCCTCGGCCGCCTATACCTCCTTCTAGACGCTCCGTCACAGAAAATTCAAATCGG
TTCCAGAACTTCGGACACTTCTCGCGATTGCCTAAAGCCAGGTTAGAACCTGGTCAGGCA
AATTTAAGCAAGTCACTGAGAGATTCAGCGGTCGTGGATTCAAACGTAACTCCAATTACA
GGGCAGGAATCTAGAGTTTCACACGTACCCGATAATGTGGTACCAGTTCCCAGCGGAAAT
GTAGGATGTAGTACTATAAACGGCAGCACCGGAACTGCGACTACGTCAACGGCAATTAGA
GAACCGACGACTACATGTGACATTTCAATGACGTCATCTCCGGGTGGCTCAGGAAATAGT
GTAAGCGCCAGTGCCGAACCACCAGCACCGTCGCATAAGGCGGCGCCAACGGCAACAGCA
GCAGCAGCGGATGACCGGAAACGGAAAGGAAGAGAAAAGGATGACGAAGGTCAGAATGAG
GATGCTGAATTTGAGTCTCCTGATACAAAAAAGCAAGCACGCGGTTCAACATCCACAAAG
CGATCTCGTGCTGCGGAGGTCCATAATCTTTCAGAAAGGAGACGTAGAGACAGAATAAAT
GAGAAGATGAAGGCCCTGCAGGAACTCATACCACGCTGTAACAAGACGGACAAAGCTTCA
ATGCTTGATGAGGCAATTGAGTATTTGAAATCACTGCAATTGCAAGTGCAGATGATGTCC
ATGGGATGTGGCATGGTCCCGATGATGTATCCTGGAATGCAACCGTACATGCCGCCAATG
GGAATGGGCATGGGTATAGGGATGGGTATGGAGATTGGCATGAACAGGCAAATGGTGCCA
TATCCACCTCTATTACAAGGTGCAGCGATGCAGAATGCAGCTGCAGCAGCACAAATGGGT
CCTAGATTTCCTATCCCTCCATTTCATTTGCCACCAGTTCCAGTACCAGATCCATCCAGA
ATGCAAGCTTCAAGTCAGCCAGATCCAATGCTAAATTCACTTGTTGCACATAATTCGAAC
CAGCCAAGACTTCCGACTTTTAATGATCCATATCAGCAGTTTTTTGGTCTCCAGCAAACG
CAAGTCGCATTACCGCAGAATCAGGCAGTAGAACAGCCAAGTAACAATAAATCCAGCAGC
AAAAAAGAAGTTGGAAATCCAGGGAATCATCAATCTGGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032990
PEP Infomation

pacid=37458433 transcript=PGSC0003DMT400048757 locus=PGSC0003DMG400018950 ID=PGSC0003DMT400048757.v4.03 annot-version=v4.03
Sequence

MNHSVPDFDMDDDYSLPASSGLTRTKKSAMAEEEIMELLWQNGQVVMQSQNQRSLKKSHI
GNGSGGGGDAVIPSDQAVGREIRHVEETTPHHLFMQEDEMASWLHYPLDDPSFERDLYSD
LLYPTPTSTLTTATLPRDNRTSTLEIRPPPPQPSPAAPIGTAPRPPIPPSRRSVTENSNR
FQNFGHFSRLPKARLEPGQANLSKSLRDSAVVDSNVTPITGQESRVSHVPDNVVPVPSGN
VGCSTINGSTGTATTSTAIREPTTTCDISMTSSPGGSGNSVSASAEPPAPSHKAAPTATA
AAADDRKRKGREKDDEGQNEDAEFESPDTKKQARGSTSTKRSRAAEVHNLSERRRRDRIN
EKMKALQELIPRCNKTDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMYPGMQPYMPPM
GMGMGIGMGMEIGMNRQMVPYPPLLQGAAMQNAAAAAQMGPRFPIPPFHLPPVPVPDPSR
MQASSQPDPMLNSLVAHNSNQPRLPTFNDPYQQFFGLQQTQVALPQNQAVEQPSNNKSSS
KKEVGNPGNHQSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400048757
Transcript Infomation

pacid=37458433 locus=PGSC0003DMG400018950 ID=PGSC0003DMT400048757.v4.03 annot-version=v4.03
Sequence

ATGAATCATTCTGTTCCTGATTTTGATATGGATGATGACTACTCTCTTCCTGCTTCTTCT
GGTCTTACCAGAACTAAGAAGTCCGCAATGGCGGAGGAGGAAATCATGGAACTACTGTGG
CAAAATGGTCAAGTGGTTATGCAGAGTCAGAATCAAAGATCTCTTAAGAAATCTCACATC
GGTAACGGCAGTGGAGGCGGTGGTGATGCGGTTATTCCCTCTGACCAAGCTGTCGGTAGA
GAGATCCGACATGTAGAGGAAACTACTCCACATCATCTGTTTATGCAGGAGGATGAGATG
GCCTCATGGCTTCACTACCCACTTGATGACCCCTCCTTCGAACGTGATCTCTACTCCGAT
CTCCTATATCCCACACCGACTTCTACCTTAACCACCGCCACGCTGCCACGAGATAACCGT
ACGTCTACGTTGGAGATCCGTCCACCTCCGCCACAACCATCGCCAGCAGCGCCGATCGGA
ACGGCTCCTCGGCCGCCTATACCTCCTTCTAGACGCTCCGTCACAGAAAATTCAAATCGG
TTCCAGAACTTCGGACACTTCTCGCGATTGCCTAAAGCCAGGTTAGAACCTGGTCAGGCA
AATTTAAGCAAGTCACTGAGAGATTCAGCGGTCGTGGATTCAAACGTAACTCCAATTACA
GGGCAGGAATCTAGAGTTTCACACGTACCCGATAATGTGGTACCAGTTCCCAGCGGAAAT
GTAGGATGTAGTACTATAAACGGCAGCACCGGAACTGCGACTACGTCAACGGCAATTAGA
GAACCGACGACTACATGTGACATTTCAATGACGTCATCTCCGGGTGGCTCAGGAAATAGT
GTAAGCGCCAGTGCCGAACCACCAGCACCGTCGCATAAGGCGGCGCCAACGGCAACAGCA
GCAGCAGCGGATGACCGGAAACGGAAAGGAAGAGAAAAGGATGACGAAGGTCAGAATGAG
GATGCTGAATTTGAGTCTCCTGATACAAAAAAGCAAGCACGCGGTTCAACATCCACAAAG
CGATCTCGTGCTGCGGAGGTCCATAATCTTTCAGAAAGGAGACGTAGAGACAGAATAAAT
GAGAAGATGAAGGCCCTGCAGGAACTCATACCACGCTGTAACAAGACGGACAAAGCTTCA
ATGCTTGATGAGGCAATTGAGTATTTGAAATCACTGCAATTGCAAGTGCAGATGATGTCC
ATGGGATGTGGCATGGTCCCGATGATGTATCCTGGAATGCAACCGTACATGCCGCCAATG
GGAATGGGCATGGGTATAGGGATGGGTATGGAGATTGGCATGAACAGGCAAATGGTGCCA
TATCCACCTCTATTACAAGGTGCAGCGATGCAGAATGCAGCTGCAGCAGCACAAATGGGT
CCTAGATTTCCTATCCCTCCATTTCATTTGCCACCAGTTCCAGTACCAGATCCATCCAGA
ATGCAAGCTTCAAGTCAGCCAGATCCAATGCTAAATTCACTTGTTGCACATAATTCGAAC
CAGCCAAGACTTCCGACTTTTAATGATCCATATCAGCAGTTTTTTGGTCTCCAGCAAACG
CAAGTCGCATTACCGCAGAATCAGGCAGTAGAACAGCCAAGTAACAATAAATCCAGCAGC
AAAAAAGAAGTTGGAAATCCAGGGAATCATCAATCTGGTTGA