Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048729
CDS Infomation

pacid=37477388 polypeptide=PGSC0003DMP400032977 locus=PGSC0003DMG400018938 ID=PGSC0003DMT400048729.v4.03 annot-version=v4.03
Sequence

ATGGATCAACTTTCTTCATCTCTCAAGAAATCATTAACACCACACGGTTCTTATAAGAAG
GTCTCTGCTGCCCACGATATCGAAAACCAACCTATACTGGCTCATCGAAGCCCGGAAGCC
CCGTCTTCTTCCTCCTCCATCAACTCCTCCTCGTTGACGACAAGGTCCTCCATTGATCTT
AATGACCGACGAGAGGTCATTGTCAAGATTGATGGTGGAGAAAAAAACAATGGAAATGAA
CATAATATGTTATGGCACGAGACGAGTTATGAATTTTGGAGAGAAGAAATGAGTAACGGG
CCCCAAAACAACGTCCCGAAGACATTCCAGCGTGGCAAGGACATGTCTGAGGATCCACCC
TCCAGACTAATTGGACAGTTCTTGAATAAACAGAGAGCTGTTGGATGTGAAATGACATTG
GACATGGACATGGAAATGGATGAGCTGAGGAGGCATCCGAAACCTGAAAATGATCATAGC
GCTGCTGGATCCAGTCCCCTAATAAATTTCCCCCCTGATCACACACACAATCATAGTCAT
ACGACATCAAGAGAACTTAGAGTTTCATTTCAGGATCCGTCACCATCTAGTAACGTGGTT
GACATCGAGCCTGACCAACCTTATAATAATGATTCATCGAGCGATGAAGAGGATGGTGCA
ATTAGTGATGCAACACCCAATGAGCAAAAGCATCTTAACCGAAGAAGGACCATAAACATG
AATAATTCTCCAGATGATAATAATAACAGCAACACTGCTTATTACACTCCTAAAAATGGT
GCTGGTGAAAGTGATCAGGTGCTAAGGTGCACTTCGTTTCAAAGAAGAGCGAGTGTATTA
GGGAGAGTAAAGACAAAATCAAGGCTAATTGACCCGCCGCCTGATATACCTGAGAGGAGA
TCAGGAAAAATAGGAAAATCTGGTCAATTAAAATCTGGAGTGTTAGGAAGAACTTCGGGG
ATGCTAAAGCCACCAGAGGAGGAAGATGACGATCCGTTATTCGATGAAGATCTTCCAGAG
GAATTTAAAAAGGGCAAAGTTGATTGCTGGACGCTGTTACAATGGATAAGTCTTATTGTA
ATTGTTACAGCTTTAATCTGCACACTTACTATTCCTTTGTTGAAGAGCAGAATATTAAGA
GGACTTCATTTGTGGAAATGGTTAGTTTTGGTTCTTGTTTTAATATGTGGGAGATTGTTA
TCAGGATGGGTGATTCGGTTAGTTGTGTTCTGTATTGAGAGGAATTTTCTATTGCGGAAA
AGGGTACTATATTTCGTTTATGGTGTTAGAAAACCTGTCCAGAATTGTCTTTGGTTAGGG
TTGGTTTTAATTGCTTGGCATTCCATGTTTGATCAGAAAGTTGATACAACTAATAAGTTC
TTGGGGTACATCAATAAACTGATGATATGTATGCTAATTGGGACAATGTTATGGTTGGTG
AAAACTCTCATGGTTAAAGTCCTAGCATCTTCATTTCATGTTAGTACTTTCTTCGATCGA
ATTCAAGAGTCATTGTTCAACCAGTATGTGATTGAGACATTATCAGGTCCGCCTTTGCTT
GAAATCCATCGATCTCAAGAAGAAGAGGACAGAACATTGGCTGAAGTTTGGAAGCTACAG
AATATTGCAGGGGCACAGTTGCCACCAGAACTTAGGCCCCCACTTGCTCCTCGATACAGT
AGTAAAGGTGCAAGTGTTAATGGTGGGCAAACACCAACACCAAAACCATCAAGAACAGTA
AGTATCGCCATTTCTGGTCCCTTGTCAAAAAATCCAGATGAACCGAACCAAGGGATATCC
ATTGATCATTTGCATAAGTTGAATCCCAAGAATATTTCAGCTTGGAATATGAAGAGATTG
ATTAAAATAGTAAGATATGGGGTAATATCTACGTTGGATGAGCAAATACATGATACCAAA
AGAGAAGATGATTCTACTACACAGATAAGAAGTGAATATGAGGCCAAAGTTGCTGCCAGG
AAAATATTCAGAAATGTTGCCAAGCCTAGGTCCAAGTTCATCTATCTGAAGGACTTAAGT
AGCTTCTTGCGAGAAGAAGAAGCTTTGAAGACTATGAATCTTGTGGAAGGATCACCGGAC
AGAGAAAAGATCAGTAAAGCATCACTCAAGAACTGGGTGGTAAGAAATGATCATAGAAGC
AATGGATTTAACATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400032977
PEP Infomation

pacid=37477388 transcript=PGSC0003DMT400048729 locus=PGSC0003DMG400018938 ID=PGSC0003DMT400048729.v4.03 annot-version=v4.03
Sequence

MDQLSSSLKKSLTPHGSYKKVSAAHDIENQPILAHRSPEAPSSSSSINSSSLTTRSSIDL
NDRREVIVKIDGGEKNNGNEHNMLWHETSYEFWREEMSNGPQNNVPKTFQRGKDMSEDPP
SRLIGQFLNKQRAVGCEMTLDMDMEMDELRRHPKPENDHSAAGSSPLINFPPDHTHNHSH
TTSRELRVSFQDPSPSSNVVDIEPDQPYNNDSSSDEEDGAISDATPNEQKHLNRRRTINM
NNSPDDNNNSNTAYYTPKNGAGESDQVLRCTSFQRRASVLGRVKTKSRLIDPPPDIPERR
SGKIGKSGQLKSGVLGRTSGMLKPPEEEDDDPLFDEDLPEEFKKGKVDCWTLLQWISLIV
IVTALICTLTIPLLKSRILRGLHLWKWLVLVLVLICGRLLSGWVIRLVVFCIERNFLLRK
RVLYFVYGVRKPVQNCLWLGLVLIAWHSMFDQKVDTTNKFLGYINKLMICMLIGTMLWLV
KTLMVKVLASSFHVSTFFDRIQESLFNQYVIETLSGPPLLEIHRSQEEEDRTLAEVWKLQ
NIAGAQLPPELRPPLAPRYSSKGASVNGGQTPTPKPSRTVSIAISGPLSKNPDEPNQGIS
IDHLHKLNPKNISAWNMKRLIKIVRYGVISTLDEQIHDTKREDDSTTQIRSEYEAKVAAR
KIFRNVAKPRSKFIYLKDLSSFLREEEALKTMNLVEGSPDREKISKASLKNWVVRNDHRS
NGFNI*

Transcript Sequence

Transcript ID

PGSC0003DMT400048729
Transcript Infomation

pacid=37477388 locus=PGSC0003DMG400018938 ID=PGSC0003DMT400048729.v4.03 annot-version=v4.03
Sequence

ATGGATCAACTTTCTTCATCTCTCAAGAAATCATTAACACCACACGGTTCTTATAAGAAG
GTCTCTGCTGCCCACGATATCGAAAACCAACCTATACTGGCTCATCGAAGCCCGGAAGCC
CCGTCTTCTTCCTCCTCCATCAACTCCTCCTCGTTGACGACAAGGTCCTCCATTGATCTT
AATGACCGACGAGAGGTCATTGTCAAGATTGATGGTGGAGAAAAAAACAATGGAAATGAA
CATAATATGTTATGGCACGAGACGAGTTATGAATTTTGGAGAGAAGAAATGAGTAACGGG
CCCCAAAACAACGTCCCGAAGACATTCCAGCGTGGCAAGGACATGTCTGAGGATCCACCC
TCCAGACTAATTGGACAGTTCTTGAATAAACAGAGAGCTGTTGGATGTGAAATGACATTG
GACATGGACATGGAAATGGATGAGCTGAGGAGGCATCCGAAACCTGAAAATGATCATAGC
GCTGCTGGATCCAGTCCCCTAATAAATTTCCCCCCTGATCACACACACAATCATAGTCAT
ACGACATCAAGAGAACTTAGAGTTTCATTTCAGGATCCGTCACCATCTAGTAACGTGGTT
GACATCGAGCCTGACCAACCTTATAATAATGATTCATCGAGCGATGAAGAGGATGGTGCA
ATTAGTGATGCAACACCCAATGAGCAAAAGCATCTTAACCGAAGAAGGACCATAAACATG
AATAATTCTCCAGATGATAATAATAACAGCAACACTGCTTATTACACTCCTAAAAATGGT
GCTGGTGAAAGTGATCAGGTGCTAAGGTGCACTTCGTTTCAAAGAAGAGCGAGTGTATTA
GGGAGAGTAAAGACAAAATCAAGGCTAATTGACCCGCCGCCTGATATACCTGAGAGGAGA
TCAGGAAAAATAGGAAAATCTGGTCAATTAAAATCTGGAGTGTTAGGAAGAACTTCGGGG
ATGCTAAAGCCACCAGAGGAGGAAGATGACGATCCGTTATTCGATGAAGATCTTCCAGAG
GAATTTAAAAAGGGCAAAGTTGATTGCTGGACGCTGTTACAATGGATAAGTCTTATTGTA
ATTGTTACAGCTTTAATCTGCACACTTACTATTCCTTTGTTGAAGAGCAGAATATTAAGA
GGACTTCATTTGTGGAAATGGTTAGTTTTGGTTCTTGTTTTAATATGTGGGAGATTGTTA
TCAGGATGGGTGATTCGGTTAGTTGTGTTCTGTATTGAGAGGAATTTTCTATTGCGGAAA
AGGGTACTATATTTCGTTTATGGTGTTAGAAAACCTGTCCAGAATTGTCTTTGGTTAGGG
TTGGTTTTAATTGCTTGGCATTCCATGTTTGATCAGAAAGTTGATACAACTAATAAGTTC
TTGGGGTACATCAATAAACTGATGATATGTATGCTAATTGGGACAATGTTATGGTTGGTG
AAAACTCTCATGGTTAAAGTCCTAGCATCTTCATTTCATGTTAGTACTTTCTTCGATCGA
ATTCAAGAGTCATTGTTCAACCAGTATGTGATTGAGACATTATCAGGTCCGCCTTTGCTT
GAAATCCATCGATCTCAAGAAGAAGAGGACAGAACATTGGCTGAAGTTTGGAAGCTACAG
AATATTGCAGGGGCACAGTTGCCACCAGAACTTAGGCCCCCACTTGCTCCTCGATACAGT
AGTAAAGGTGCAAGTGTTAATGGTGGGCAAACACCAACACCAAAACCATCAAGAACAGTA
AGTATCGCCATTTCTGGTCCCTTGTCAAAAAATCCAGATGAACCGAACCAAGGGATATCC
ATTGATCATTTGCATAAGTTGAATCCCAAGAATATTTCAGCTTGGAATATGAAGAGATTG
ATTAAAATAGTAAGATATGGGGTAATATCTACGTTGGATGAGCAAATACATGATACCAAA
AGAGAAGATGATTCTACTACACAGATAAGAAGTGAATATGAGGCCAAAGTTGCTGCCAGG
AAAATATTCAGAAATGTTGCCAAGCCTAGGTCCAAGTTCATCTATCTGAAGGACTTAAGT
AGCTTCTTGCGAGAAGAAGAAGCTTTGAAGACTATGAATCTTGTGGAAGGATCACCGGAC
AGAGAAAAGATCAGTAAAGCATCACTCAAGAACTGGGTGGTAAGAAATGATCATAGAAGC
AATGGATTTAACATCTAA