Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048727
CDS Infomation

pacid=37477112 polypeptide=PGSC0003DMP400032975 locus=PGSC0003DMG400018937 ID=PGSC0003DMT400048727.v4.03 annot-version=v4.03
Sequence

ATGGATTCTCTAGCTCTCTTCGCCACGGCTTCTCTTATCGCCGTTAGCCTCTACTGGTTC
GTATGCATCCTTGGCTCCGCCGAGCAAAAGGGCAAACGCGCTGTCGAACTCTCCGGTGGT
TCTATCGCCAAAGAGAACGTTCAAGACAAATACAAACAATACTGGTCTTTCTTCCGTCGT
CCTAAAGAAATCGAAACTACCGAAAATGTCCCTGATTTTGTAGACACTTTCTACAATCTC
GTTACTGATATTTACGAATGGGGATGGGGTCAATCTTTTCATTTTTCCCCTTCTATCCCT
GGAAAATCTGATCGTGAATGCACGCGCATTCACGAAGAGAGGGCTGTGGATCTGTTAGGT
GTAAAACCCGGAGCCCGAGTTCTAGATGCGGGCTGCGGGGTTGGCGGGCCTATGCGAGCC
ATCGCTGCCCATTCAGGTGCTAATATTGTTGGCATCACTATTAACGAGTATCAAGTAAAT
AGGGCTCGACTCCACAATAAGAAAGCGGGGCTTGACTCATTATGTGAAGTTGTGTGTGGG
AATTTTCTAGAAATGCCTTTTGATGACAACAGTTTTGATGGTGTTTATTCAATTGAAGCA
ACATGTCATGCACCAAAACTCGAAGAAGTGTACAGAGAGATATACAGGGTATTAAAACCC
GGATCCCTGTACGTTTCATATGAATGGGTTACAACTGAATTGTTCAATTCGGATGATCCC
GAACATGTGGAGATTATTCATGGTATTGAAAGGGGAGATGCCTTGCCTGGATTGAGAAAA
TATAGTGATATATTTCAGGTTGCTAAGAAAGTGGGATTCGAAGTTGTTGATGAGAAAGAT
TTAGCTAAGCCACCATCGAACCCATGGTGGACGAGGCTGCAGATGGGGAAAATTGCTTAT
TGGAGAAATCATATTGTGGTTACAGTGCTTTCTTGGCTTGGAATTGCGCCTAAGGGTACA
GTAGATGTGCACAAGATGTTGGTTGAGACAGCTGATTATTTGGCTAAAGGTGGCGATAAA
GGGATTTTTAGTCCTATGCATATGATTCTCTGCAGAAAGCCTGAAGAAAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400032975
PEP Infomation

pacid=37477112 transcript=PGSC0003DMT400048727 locus=PGSC0003DMG400018937 ID=PGSC0003DMT400048727.v4.03 annot-version=v4.03
Sequence

MDSLALFATASLIAVSLYWFVCILGSAEQKGKRAVELSGGSIAKENVQDKYKQYWSFFRR
PKEIETTENVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSDRECTRIHEERAVDLLG
VKPGARVLDAGCGVGGPMRAIAAHSGANIVGITINEYQVNRARLHNKKAGLDSLCEVVCG
NFLEMPFDDNSFDGVYSIEATCHAPKLEEVYREIYRVLKPGSLYVSYEWVTTELFNSDDP
EHVEIIHGIERGDALPGLRKYSDIFQVAKKVGFEVVDEKDLAKPPSNPWWTRLQMGKIAY
WRNHIVVTVLSWLGIAPKGTVDVHKMLVETADYLAKGGDKGIFSPMHMILCRKPEEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400048727
Transcript Infomation

pacid=37477112 locus=PGSC0003DMG400018937 ID=PGSC0003DMT400048727.v4.03 annot-version=v4.03
Sequence

ATGGATTCTCTAGCTCTCTTCGCCACGGCTTCTCTTATCGCCGTTAGCCTCTACTGGTTC
GTATGCATCCTTGGCTCCGCCGAGCAAAAGGGCAAACGCGCTGTCGAACTCTCCGGTGGT
TCTATCGCCAAAGAGAACGTTCAAGACAAATACAAACAATACTGGTCTTTCTTCCGTCGT
CCTAAAGAAATCGAAACTACCGAAAATGTCCCTGATTTTGTAGACACTTTCTACAATCTC
GTTACTGATATTTACGAATGGGGATGGGGTCAATCTTTTCATTTTTCCCCTTCTATCCCT
GGAAAATCTGATCGTGAATGCACGCGCATTCACGAAGAGAGGGCTGTGGATCTGTTAGGT
GTAAAACCCGGAGCCCGAGTTCTAGATGCGGGCTGCGGGGTTGGCGGGCCTATGCGAGCC
ATCGCTGCCCATTCAGGTGCTAATATTGTTGGCATCACTATTAACGAGTATCAAGTAAAT
AGGGCTCGACTCCACAATAAGAAAGCGGGGCTTGACTCATTATGTGAAGTTGTGTGTGGG
AATTTTCTAGAAATGCCTTTTGATGACAACAGTTTTGATGGTGTTTATTCAATTGAAGCA
ACATGTCATGCACCAAAACTCGAAGAAGTGTACAGAGAGATATACAGGGTATTAAAACCC
GGATCCCTGTACGTTTCATATGAATGGGTTACAACTGAATTGTTCAATTCGGATGATCCC
GAACATGTGGAGATTATTCATGGTATTGAAAGGGGAGATGCCTTGCCTGGATTGAGAAAA
TATAGTGATATATTTCAGGTTGCTAAGAAAGTGGGATTCGAAGTTGTTGATGAGAAAGAT
TTAGCTAAGCCACCATCGAACCCATGGTGGACGAGGCTGCAGATGGGGAAAATTGCTTAT
TGGAGAAATCATATTGTGGTTACAGTGCTTTCTTGGCTTGGAATTGCGCCTAAGGGTACA
GTAGATGTGCACAAGATGTTGGTTGAGACAGCTGATTATTTGGCTAAAGGTGGCGATAAA
GGGATTTTTAGTCCTATGCATATGATTCTCTGCAGAAAGCCTGAAGAAAACTAG