Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048664
CDS Infomation

pacid=37448471 polypeptide=PGSC0003DMP400032936 locus=PGSC0003DMG400018903 ID=PGSC0003DMT400048664.v4.03 annot-version=v4.03
Sequence

ATGGAATTCTTATCTATCTTTGTGGACAGGGTAACAGATTGCTTGATCCAGCCAGTTGAG
CGAGGGATTGGGTATTTATTTTACTACAAGAGCAACATCAAATCTATGGAAGATGAATCT
AAGAAGCTGGAGGATATCAGAATTGGGGTGCATCAAAGAGCGGAAGCTGACCGGAGAAAC
TTACAAGTCATTTCACCCAATGTTGAGGCTTGGTTTACTAGTGTTGATACTACTACTTCA
GATGTGGCAGCTGTAATGCAACGAGGTAGAATTGAGGTTGAAAGATATGGTTGGTGTCCA
AACGTGAAGTCACGTTACTCGCTGAGCAGGAGAGCTAAGAAAATTGAACTGGAGTTGATT
AAACTTCGAAATGAAGGCAATGCTTATGCTGTTTTCTCCTATCCTGCTGTCGAAATTGCA
GTTATACCTAGTAACAGTGGTGAGGAGTTTGACTCCAGAAAATTTCAAGAGGAAGAGGTC
ATGGCAGCTTTGAGAGATGACGGGGTTACTATGATTGGGATATGTGGTATGGGTGGTGTT
GGTAAGACAACACTGGCTGAGAAAATCAGACAAAAGGCGAAACAAGGAAGTTTGTTCAAT
GATGTTGTCATGGTAATTGTTAGTCAACAACCAGACCCTAAAAGAATTCAGGGTGAGATC
GCAAGAGGAGTTGGGCTAACATTAGACGGGGGTGATATGTCTAGTCGTGGAGATCGGCTG
CATACAAGGTTAATGGATCAGAAAAGCTGCATCCTTATAATCTTGGATGATGTTTGGAAG
CCTCTTGATCTAAAGAGACTTGGAATTCCAAGTGGAAACAACCACAACCATCGGTGCAAA
GTGATATTCACAACGCGTTTCCGGTCTGTTTGTGAAGCAATGGGAGCTCGGAAGATCATG
GAAGTTGGAACGTTATCCGAAGAGGAAGCATGGATCCTTTTTAGGAAGAAAGTCGGTGAT
TTTGTCGATGATTCTTCACTTCATGACACAGCAAAAGAGGTTACCAAAGAATGCAAGGGG
CTGCCGCTTGCAATTATTACAGTTGCAGGAGCACTAAAAAAGCATAAAAAAAAGCGTTCG
TGGGACTGTGCCCTTGATGAATTACGCAGTGCAGTAACAATAAGTATCCCTGAAGTGCCC
ACAGAGTTGTACAAACCTCTGAAGCTAAGCTATGATTACTTGCAAAGTAATGAAGCCAAG
CACCTCTTTTTGCTTTGTTCCTTGTTCGAGGAAGATAGTGATATTTGTCCTGAAGAATTA
CTTAGATATGGAATGGCGCTTCACATCTTTCCAGGAATAAATTTAGAACATGCAAGAAAT
AAGGTGTTTTGTATGTTAGAAAGATTCAAAGATTGTTTCTTGTTATCCCAAGGATCAGAC
AAAAATTATGTCAAAATGCATGATGTGGTGCGTGACGTGGCTATATATATTGCATCTGAG
GGCAAGCATATATTTATGGTAAGTCACGATGTGAAATCGAAAGAGTTCCCAAGAAAAGAC
TCTTACGAGCAATACACTCACATGTCAATTGTTGCAAATAACTTTTATGAGCTTCCTAGC
CCAATCATTTTCCCCAACCTGAAGCTTCTAATGTTGAAACTCTGTTTTTCTGAGACATTC
AAGTTACATGATGATTTTTTTAATGGAATGAGTAAACTTGATGTCTTAAGCCTGAGGGGA
GACAGATATAGGTCCATTCTGCTTGTTCGAGCATCCATAGCCAGATATTTGGATCCCATT
CCGCCTTTTCCAAAATCCATTCAGAAGTTGTCAAGTCTGAGGATGCTGTGTCTGAGTAAA
TTCAGGTTGGATGACATATCCATTATTGGGGAACTTGTCACATTAGAAATTCTCAGCATT
AGAGATTCTCGGTTAGAGGAGCTGCCAGTGGAGATAGGAAATTTGATCAATCTAGTTATG
TTAGAGTTGCGGACTGTGAATAGACACTTAATAGGATTTCAGCAGGGGTCTTATCAGGAC
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400032936
PEP Infomation

pacid=37448471 transcript=PGSC0003DMT400048664 locus=PGSC0003DMG400018903 ID=PGSC0003DMT400048664.v4.03 annot-version=v4.03
Sequence

MEFLSIFVDRVTDCLIQPVERGIGYLFYYKSNIKSMEDESKKLEDIRIGVHQRAEADRRN
LQVISPNVEAWFTSVDTTTSDVAAVMQRGRIEVERYGWCPNVKSRYSLSRRAKKIELELI
KLRNEGNAYAVFSYPAVEIAVIPSNSGEEFDSRKFQEEEVMAALRDDGVTMIGICGMGGV
GKTTLAEKIRQKAKQGSLFNDVVMVIVSQQPDPKRIQGEIARGVGLTLDGGDMSSRGDRL
HTRLMDQKSCILIILDDVWKPLDLKRLGIPSGNNHNHRCKVIFTTRFRSVCEAMGARKIM
EVGTLSEEEAWILFRKKVGDFVDDSSLHDTAKEVTKECKGLPLAIITVAGALKKHKKKRS
WDCALDELRSAVTISIPEVPTELYKPLKLSYDYLQSNEAKHLFLLCSLFEEDSDICPEEL
LRYGMALHIFPGINLEHARNKVFCMLERFKDCFLLSQGSDKNYVKMHDVVRDVAIYIASE
GKHIFMVSHDVKSKEFPRKDSYEQYTHMSIVANNFYELPSPIIFPNLKLLMLKLCFSETF
KLHDDFFNGMSKLDVLSLRGDRYRSILLVRASIARYLDPIPPFPKSIQKLSSLRMLCLSK
FRLDDISIIGELVTLEILSIRDSRLEELPVEIGNLINLVMLELRTVNRHLIGFQQGSYQD
*

Transcript Sequence

Transcript ID

PGSC0003DMT400048664
Transcript Infomation

pacid=37448471 locus=PGSC0003DMG400018903 ID=PGSC0003DMT400048664.v4.03 annot-version=v4.03
Sequence

ATGGAATTCTTATCTATCTTTGTGGACAGGGTAACAGATTGCTTGATCCAGCCAGTTGAG
CGAGGGATTGGGTATTTATTTTACTACAAGAGCAACATCAAATCTATGGAAGATGAATCT
AAGAAGCTGGAGGATATCAGAATTGGGGTGCATCAAAGAGCGGAAGCTGACCGGAGAAAC
TTACAAGTCATTTCACCCAATGTTGAGGCTTGGTTTACTAGTGTTGATACTACTACTTCA
GATGTGGCAGCTGTAATGCAACGAGGTAGAATTGAGGTTGAAAGATATGGTTGGTGTCCA
AACGTGAAGTCACGTTACTCGCTGAGCAGGAGAGCTAAGAAAATTGAACTGGAGTTGATT
AAACTTCGAAATGAAGGCAATGCTTATGCTGTTTTCTCCTATCCTGCTGTCGAAATTGCA
GTTATACCTAGTAACAGTGGTGAGGAGTTTGACTCCAGAAAATTTCAAGAGGAAGAGGTC
ATGGCAGCTTTGAGAGATGACGGGGTTACTATGATTGGGATATGTGGTATGGGTGGTGTT
GGTAAGACAACACTGGCTGAGAAAATCAGACAAAAGGCGAAACAAGGAAGTTTGTTCAAT
GATGTTGTCATGGTAATTGTTAGTCAACAACCAGACCCTAAAAGAATTCAGGGTGAGATC
GCAAGAGGAGTTGGGCTAACATTAGACGGGGGTGATATGTCTAGTCGTGGAGATCGGCTG
CATACAAGGTTAATGGATCAGAAAAGCTGCATCCTTATAATCTTGGATGATGTTTGGAAG
CCTCTTGATCTAAAGAGACTTGGAATTCCAAGTGGAAACAACCACAACCATCGGTGCAAA
GTGATATTCACAACGCGTTTCCGGTCTGTTTGTGAAGCAATGGGAGCTCGGAAGATCATG
GAAGTTGGAACGTTATCCGAAGAGGAAGCATGGATCCTTTTTAGGAAGAAAGTCGGTGAT
TTTGTCGATGATTCTTCACTTCATGACACAGCAAAAGAGGTTACCAAAGAATGCAAGGGG
CTGCCGCTTGCAATTATTACAGTTGCAGGAGCACTAAAAAAGCATAAAAAAAAGCGTTCG
TGGGACTGTGCCCTTGATGAATTACGCAGTGCAGTAACAATAAGTATCCCTGAAGTGCCC
ACAGAGTTGTACAAACCTCTGAAGCTAAGCTATGATTACTTGCAAAGTAATGAAGCCAAG
CACCTCTTTTTGCTTTGTTCCTTGTTCGAGGAAGATAGTGATATTTGTCCTGAAGAATTA
CTTAGATATGGAATGGCGCTTCACATCTTTCCAGGAATAAATTTAGAACATGCAAGAAAT
AAGGTGTTTTGTATGTTAGAAAGATTCAAAGATTGTTTCTTGTTATCCCAAGGATCAGAC
AAAAATTATGTCAAAATGCATGATGTGGTGCGTGACGTGGCTATATATATTGCATCTGAG
GGCAAGCATATATTTATGGTAAGTCACGATGTGAAATCGAAAGAGTTCCCAAGAAAAGAC
TCTTACGAGCAATACACTCACATGTCAATTGTTGCAAATAACTTTTATGAGCTTCCTAGC
CCAATCATTTTCCCCAACCTGAAGCTTCTAATGTTGAAACTCTGTTTTTCTGAGACATTC
AAGTTACATGATGATTTTTTTAATGGAATGAGTAAACTTGATGTCTTAAGCCTGAGGGGA
GACAGATATAGGTCCATTCTGCTTGTTCGAGCATCCATAGCCAGATATTTGGATCCCATT
CCGCCTTTTCCAAAATCCATTCAGAAGTTGTCAAGTCTGAGGATGCTGTGTCTGAGTAAA
TTCAGGTTGGATGACATATCCATTATTGGGGAACTTGTCACATTAGAAATTCTCAGCATT
AGAGATTCTCGGTTAGAGGAGCTGCCAGTGGAGATAGGAAATTTGATCAATCTAGTTATG
TTAGAGTTGCGGACTGTGAATAGACACTTAATAGGATTTCAGCAGGGGTCTTATCAGGAC
TAG