Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048583
CDS Infomation

pacid=37480323 polypeptide=PGSC0003DMP400032896 locus=PGSC0003DMG400018876 ID=PGSC0003DMT400048583.v4.03 annot-version=v4.03
Sequence

ATGATTGACTTGACTAGTTTTGTTATTGTCCTTCTTTGCACGTATCTTCTTAATTTGATC
AATTATAGTATAGTCCTTTTTGGCGCATATCTTATTTCCAAGCTACTTCATTTTTCATTC
GTCGATAAGTCGAATCGAGAAATCAATCAACTCCCTCCTGGTCCAAAACAATGGCCTATT
GTAGGCAACCTTTTTCAGTTAGGGCAATTACCTCATCGAGACATGGCGTCTTTCTGCGAA
AAATATGGCCCATTGGTCTATCTCCGACTAGGTAATGTTGATGCTATCACCACCAATGAT
CCAGAAATCATAAGAGAAATACTTGTACAACAAGATGATGTTTTTGCATCTAGGCCAAGA
ACTCTTGCTGCCATTCATCTAGCTTATGGTTGTGGGGATGTGGCATTGGCTCCTTTAGGT
CCAAAATGGAAAAGAATGAGAAGAATATGTATGGAACATTTATTGACAACTAAAAGACTT
GAATCATTTGCAAAACATAGGGCAGATGAAGCCCAAAGTCTAGTTAAAGATATTTGGACC
AAAGCCCAAAAAGGACAAATAGTGAATTTGAGGGAAGTTTTGGGTGGATTTTCAATGAAT
AATGTGACTAGAATGTTGTTAGGTAAACAATATTTTGGGGCAGAATCAGCAGGTCCACAA
GAAGCAATGGAATTTATGCATGTAACACATGAGTTATTTTGGTTACTTGGAGTGATATAT
TTAGGTGATTATTTACCTTTTTGGAGGTGGATTGATCCTTATGGTTGTGAGAAAAAAATG
AGGGATGTTGAAAAAAGGATTGATGATTTTCATATGAGAATAATTGAAGAACATAGAAAG
AAGAAAGGTAATAAAAATAATAATAATATTGATGATGATGAAATGGACTTTGTGGATGTT
TTATTGTCTCTACCAGGAGAAGATGAAGGAGATGGTAATGGAAAACAAAATATGGATGAT
GTAGAGATTAAAGCTCTAATTCAGGATATGATAGCTGCAGCCACAGACACTTCTGCTGTG
ACCAACGAATGGGCAATGGCTGAGGTAATCAGACATCCACATGTCCTCAAAAAGATCCAA
GAAGAACTCGATATAGTTGTCGGGTCGGGTCGGATGGTAACCGAATCCGACTTGATCCAT
CTCAAGTACCTCCGTTGTGTAGTACGTGAAACATTCCGAATGCACCCTGCGGGTCCATTC
CTAATCCCACATGAATCAATTCGCGATACTATGATCAACGGCTATTACATCCCGGCCAAG
ACACGCGTGTTCATCAACACACATGGTCTTGGCCGGAACACAAAGATTTGGGACAACATA
GATGAGTTTAGGCCAGAGAGACATTTACCACCAAATGATGATGAAAAAAACATGATCATG
ACTACTAGTAGTAGTAGAGTTGAGATTAGTCATGGTCCAGATTTCAAGATTTTGCCATTT
AGTGCTGGAAAAAGGAAGTGTCCTGGTGCACCATTGGGTGTGAAATTGGTGCTTATGGCA
TTGGCTAGGTTGTTTCATTGCTATGATTGGAGTCCACCAAATGGAGTAAAGCATCAAGAT
ATTGACACAAATGAAGTTTATGGAATGACTATGCCTAAAGCTAAGCCATTGATGGCTATT
GCTAAACCTAGACTGCCTGCTCACTTGTACCAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400032896
PEP Infomation

pacid=37480323 transcript=PGSC0003DMT400048583 locus=PGSC0003DMG400018876 ID=PGSC0003DMT400048583.v4.03 annot-version=v4.03
Sequence

MIDLTSFVIVLLCTYLLNLINYSIVLFGAYLISKLLHFSFVDKSNREINQLPPGPKQWPI
VGNLFQLGQLPHRDMASFCEKYGPLVYLRLGNVDAITTNDPEIIREILVQQDDVFASRPR
TLAAIHLAYGCGDVALAPLGPKWKRMRRICMEHLLTTKRLESFAKHRADEAQSLVKDIWT
KAQKGQIVNLREVLGGFSMNNVTRMLLGKQYFGAESAGPQEAMEFMHVTHELFWLLGVIY
LGDYLPFWRWIDPYGCEKKMRDVEKRIDDFHMRIIEEHRKKKGNKNNNNIDDDEMDFVDV
LLSLPGEDEGDGNGKQNMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIRHPHVLKKIQ
EELDIVVGSGRMVTESDLIHLKYLRCVVRETFRMHPAGPFLIPHESIRDTMINGYYIPAK
TRVFINTHGLGRNTKIWDNIDEFRPERHLPPNDDEKNMIMTTSSSRVEISHGPDFKILPF
SAGKRKCPGAPLGVKLVLMALARLFHCYDWSPPNGVKHQDIDTNEVYGMTMPKAKPLMAI
AKPRLPAHLYQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400048583
Transcript Infomation

pacid=37480323 locus=PGSC0003DMG400018876 ID=PGSC0003DMT400048583.v4.03 annot-version=v4.03
Sequence

ATGATTGACTTGACTAGTTTTGTTATTGTCCTTCTTTGCACGTATCTTCTTAATTTGATC
AATTATAGTATAGTCCTTTTTGGCGCATATCTTATTTCCAAGCTACTTCATTTTTCATTC
GTCGATAAGTCGAATCGAGAAATCAATCAACTCCCTCCTGGTCCAAAACAATGGCCTATT
GTAGGCAACCTTTTTCAGTTAGGGCAATTACCTCATCGAGACATGGCGTCTTTCTGCGAA
AAATATGGCCCATTGGTCTATCTCCGACTAGGTAATGTTGATGCTATCACCACCAATGAT
CCAGAAATCATAAGAGAAATACTTGTACAACAAGATGATGTTTTTGCATCTAGGCCAAGA
ACTCTTGCTGCCATTCATCTAGCTTATGGTTGTGGGGATGTGGCATTGGCTCCTTTAGGT
CCAAAATGGAAAAGAATGAGAAGAATATGTATGGAACATTTATTGACAACTAAAAGACTT
GAATCATTTGCAAAACATAGGGCAGATGAAGCCCAAAGTCTAGTTAAAGATATTTGGACC
AAAGCCCAAAAAGGACAAATAGTGAATTTGAGGGAAGTTTTGGGTGGATTTTCAATGAAT
AATGTGACTAGAATGTTGTTAGGTAAACAATATTTTGGGGCAGAATCAGCAGGTCCACAA
GAAGCAATGGAATTTATGCATGTAACACATGAGTTATTTTGGTTACTTGGAGTGATATAT
TTAGGTGATTATTTACCTTTTTGGAGGTGGATTGATCCTTATGGTTGTGAGAAAAAAATG
AGGGATGTTGAAAAAAGGATTGATGATTTTCATATGAGAATAATTGAAGAACATAGAAAG
AAGAAAGGTAATAAAAATAATAATAATATTGATGATGATGAAATGGACTTTGTGGATGTT
TTATTGTCTCTACCAGGAGAAGATGAAGGAGATGGTAATGGAAAACAAAATATGGATGAT
GTAGAGATTAAAGCTCTAATTCAGGATATGATAGCTGCAGCCACAGACACTTCTGCTGTG
ACCAACGAATGGGCAATGGCTGAGGTAATCAGACATCCACATGTCCTCAAAAAGATCCAA
GAAGAACTCGATATAGTTGTCGGGTCGGGTCGGATGGTAACCGAATCCGACTTGATCCAT
CTCAAGTACCTCCGTTGTGTAGTACGTGAAACATTCCGAATGCACCCTGCGGGTCCATTC
CTAATCCCACATGAATCAATTCGCGATACTATGATCAACGGCTATTACATCCCGGCCAAG
ACACGCGTGTTCATCAACACACATGGTCTTGGCCGGAACACAAAGATTTGGGACAACATA
GATGAGTTTAGGCCAGAGAGACATTTACCACCAAATGATGATGAAAAAAACATGATCATG
ACTACTAGTAGTAGTAGAGTTGAGATTAGTCATGGTCCAGATTTCAAGATTTTGCCATTT
AGTGCTGGAAAAAGGAAGTGTCCTGGTGCACCATTGGGTGTGAAATTGGTGCTTATGGCA
TTGGCTAGGTTGTTTCATTGCTATGATTGGAGTCCACCAAATGGAGTAAAGCATCAAGAT
ATTGACACAAATGAAGTTTATGGAATGACTATGCCTAAAGCTAAGCCATTGATGGCTATT
GCTAAACCTAGACTGCCTGCTCACTTGTACCAATAA