Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048564
CDS Infomation

pacid=37455834 polypeptide=PGSC0003DMP400032886 locus=PGSC0003DMG400018865 ID=PGSC0003DMT400048564.v4.03 annot-version=v4.03
Sequence

ATGCTGACGAGTGTGGATTCAATTCCTCTTCAGACTGTATATACTATTGATTTACGGTCC
AATTTGCTTCAAGGTTCACTACCTATGCCACCAAATTCCACAAGATACTTCTTCATCTCC
CAAAATAATCTCACTAAAGAAATTCCTTCATCTATTTGCAATTTGACATCACTGGTAATG
CTAGATTTGGCAAGAAACAACTTGACGGGAGAAATTCCGCAATGTTTGGGTAATATTAGT
GGTCTCAAGGTTCTTGATATGCAGCACAACAGGCTTATTGGTACTCTTCCAACAATTTTC
AGCATTAATGGAAGTTCACTGAAAAGCCTCAACTTGCATAGCAATAAATTAGAGGGGAGA
ATTCCCCGATCATTGGCCAATTGCAAAGAGTTGCAGCTTCTTGATTTAGGTGATAATCAT
CTCACTGACACATTCCCGATGTGGTTGGGAACTCTTCCAAAGCTAAAAGTTTTAAGCTTG
AGATCAAATACATTGCATGGGTCCATTCAACCTCCAAGGATTGAAACTATTTTTCCCGAG
CTTCAAATCTTGGATCTCTCTTACAATGCCTTCTCGGGAAACTTACCTTCGAATCTGTTT
CAACATCTAAAAGCTATGAGGACAAATGATCCATCAACGGAAGCACCAAGATATCCTGGA
AGTACATATTACGAAGATTCGATTACAGTTACAACCAAGGGATTTGTGCGTGAAATTGTG
AGAATCTTGTATCCTAGAAGTACATATTACGAAGATTCGATTACAGTTACAACCAAGGGA
TTTGTACGTGAAATTGTGAGAATCTTGTATCTGTACACTGTTATCGATTTTTCAAGTAAT
AAATTTGAAGGGCAAATTCCAAGTATCATGGGGGATCTCATTGCAGTTCACACATTAAAT
TTATCTCGTAATGGATTAAAAGGTCATATACCACCATCATTAGGAGATTTATCTTCAGTT
GAATCATTGGATCTATCAGGAAACCAGCTTACGGGAGAGATACCAGAACAACTGGCTTCT
CTTACGTCTCTTTCATTCTTAAATCTCTCTCACAATCATCTCCAAGGATGCATCCCTCAA
GGATCTCAATTTCACACTTTTGAGAGCAATTCATATGAAGGGAATGATGGATTACGTGGA
TTTCCTGTTTCAAAAATTGTGGAGATGCTGGGGTGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400032886
PEP Infomation

pacid=37455834 transcript=PGSC0003DMT400048564 locus=PGSC0003DMG400018865 ID=PGSC0003DMT400048564.v4.03 annot-version=v4.03
Sequence

MLTSVDSIPLQTVYTIDLRSNLLQGSLPMPPNSTRYFFISQNNLTKEIPSSICNLTSLVM
LDLARNNLTGEIPQCLGNISGLKVLDMQHNRLIGTLPTIFSINGSSLKSLNLHSNKLEGR
IPRSLANCKELQLLDLGDNHLTDTFPMWLGTLPKLKVLSLRSNTLHGSIQPPRIETIFPE
LQILDLSYNAFSGNLPSNLFQHLKAMRTNDPSTEAPRYPGSTYYEDSITVTTKGFVREIV
RILYPRSTYYEDSITVTTKGFVREIVRILYLYTVIDFSSNKFEGQIPSIMGDLIAVHTLN
LSRNGLKGHIPPSLGDLSSVESLDLSGNQLTGEIPEQLASLTSLSFLNLSHNHLQGCIPQ
GSQFHTFESNSYEGNDGLRGFPVSKIVEMLGC*

Transcript Sequence

Transcript ID

PGSC0003DMT400048564
Transcript Infomation

pacid=37455834 locus=PGSC0003DMG400018865 ID=PGSC0003DMT400048564.v4.03 annot-version=v4.03
Sequence

ATGCTGACGAGTGTGGATTCAATTCCTCTTCAGACTGTATATACTATTGATTTACGGTCC
AATTTGCTTCAAGGTTCACTACCTATGCCACCAAATTCCACAAGATACTTCTTCATCTCC
CAAAATAATCTCACTAAAGAAATTCCTTCATCTATTTGCAATTTGACATCACTGGTAATG
CTAGATTTGGCAAGAAACAACTTGACGGGAGAAATTCCGCAATGTTTGGGTAATATTAGT
GGTCTCAAGGTTCTTGATATGCAGCACAACAGGCTTATTGGTACTCTTCCAACAATTTTC
AGCATTAATGGAAGTTCACTGAAAAGCCTCAACTTGCATAGCAATAAATTAGAGGGGAGA
ATTCCCCGATCATTGGCCAATTGCAAAGAGTTGCAGCTTCTTGATTTAGGTGATAATCAT
CTCACTGACACATTCCCGATGTGGTTGGGAACTCTTCCAAAGCTAAAAGTTTTAAGCTTG
AGATCAAATACATTGCATGGGTCCATTCAACCTCCAAGGATTGAAACTATTTTTCCCGAG
CTTCAAATCTTGGATCTCTCTTACAATGCCTTCTCGGGAAACTTACCTTCGAATCTGTTT
CAACATCTAAAAGCTATGAGGACAAATGATCCATCAACGGAAGCACCAAGATATCCTGGA
AGTACATATTACGAAGATTCGATTACAGTTACAACCAAGGGATTTGTGCGTGAAATTGTG
AGAATCTTGTATCCTAGAAGTACATATTACGAAGATTCGATTACAGTTACAACCAAGGGA
TTTGTACGTGAAATTGTGAGAATCTTGTATCTGTACACTGTTATCGATTTTTCAAGTAAT
AAATTTGAAGGGCAAATTCCAAGTATCATGGGGGATCTCATTGCAGTTCACACATTAAAT
TTATCTCGTAATGGATTAAAAGGTCATATACCACCATCATTAGGAGATTTATCTTCAGTT
GAATCATTGGATCTATCAGGAAACCAGCTTACGGGAGAGATACCAGAACAACTGGCTTCT
CTTACGTCTCTTTCATTCTTAAATCTCTCTCACAATCATCTCCAAGGATGCATCCCTCAA
GGATCTCAATTTCACACTTTTGAGAGCAATTCATATGAAGGGAATGATGGATTACGTGGA
TTTCCTGTTTCAAAAATTGTGGAGATGCTGGGGTGTTAG