Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048449
CDS Infomation

pacid=37447397 polypeptide=PGSC0003DMP400032813 locus=PGSC0003DMG400018818 ID=PGSC0003DMT400048449.v4.03 annot-version=v4.03
Sequence

ATGGATGAATTTGTACCAGAAAGAACATGTGCATATATAAGTCAAGATGATGTTCATCTA
GCAAATCTAACTGTGAGGGAGACTCTTGAATTTTCAGCTAGATGTCAAGGAGTTGGACCT
CGTTATGAGATGTTGGAAGAGTTGTTAAAGAGAGAAAAGGAAGCAAATATAAAGCCAGAT
CCTGATATTGACATGTTTATGAAGGCAGCAACAGTTCAAGGGAAAGAGCCAAATATAATA
ACAGATTATACACTCAAGATATTGGGTCTTGAGATATGTGCTGAGACACTAGTTGGTGAT
GAAATGGTACGAGGAATTTCTGGTGGACAGCTAAAGAGACTCACCACAGGAGAGATGATG
GTTGGACCAGCAAGAGCTCTATTTATGGATGAAATATCAACTGGATTAGACAGTTCAACA
ACCTTCCAAATCGTCAAATCCATTAGACAATCCATCCACATTCTTAAGGGAACTGCTCTT
ATCTCCCTTCTGCAGCCTGCACCAGAAACTTATGGCCTTTTTGATGACGTGATTCTTTTG
GCGGATGGGCGAATTGTGTATCAAGGTCCACGTGAACATGTTCTTGAATTCTTTGAGTTT
GTGGGGTTTAAATGTCCTCGGAGAAAGGGAGTAGCTGATTTCTTGCAAGAAGTGACCTCT
AGGAAAGATCAGGAGCAATACTGGGCAAGGACAGATGAGCCATACAAATTTGTTTCATCC
AGGGAGTTCTTTGAAGCATTTCAGTCCTTCCATGTCGGACGCGAACTTGCAAATGACCTT
TCTGTTCCTTTTGACAAGGCCAACAAGAATCCTGATGCTCTAACCACCAACAAGTATGGC
GTTAAAAAGAGGGATCTTTTGAAAGCTTGCATGTCAAGAGAAATCCTTCTCATGAAGAGG
AATATATTTGTCTACTTGTTCAAGATAATACAACATCTGTTATTGGCTTCTATAACAATG
ACACTGTTCCTGCGAATCAAGATGCCGAAGGAGACACAGACAGATGGATTCATCTTCATG
GGTGCATTGTTCTTTACAGTAATTGCAGCTATGTTCAATGGGTGCTCAGAGGTTCCTTTC
ACTATCTTGAAGCTTCCGGTCTTCTTCAAGCAGCACAACCTTCTCTTCTTTCCTGTATGG
GCTTATACTTTGCCTGCATGGATAGTCAAGATCCCAATCTCAATTATCGAGTCTTCCATT
TGGGTTTCTATCACATACTATGCAATAGGATTTGATCCAAACATTGTAAGGTTTTCCAAG
CAGTTATTTCTAGTGATATGTGTTGACCAGATGGCTTCTGGATTATTTCGCTTCATGGCA
GCTGTTGGAAGGAAAATGATAATCGCAAACACATTGGGATCGCTTGCATTACTTCTTGCT
CTTGTAATGGGTGGATTCATAATGGATCGAGATGATGTGAAAAAATGGTGGTTATGGGGT
TACTGGTGCTCTCCGATGATGTACGCACAGAACGCCATCACTGTAAATGAGTTTCTCGGC
AATAGTTGGAGTAATAATGTTCCTGGCTCAACAGATACACTAGGAGTTGTAGTGTTAAAG
TCTCGGGCAATGTTTCCTGATGCACACTGGTACTGGATTGGAGTAGGCGCAGTGCTAGGA
TACGTTGTATTTTTCAATTTTATGGCTACGTTGGCCTTAACTTACCTCAAGCCATTTGGA
AAATCTGGTGCAGTTTTGCCTGATGAAAAAGTTGTCAAAAGGAATACAAAGATACGGAAT
ATAGACATAAAGTCATCAACAGGAGAAATGAAAAATGAGGGCAAAAGAAATGCACCTATT
CGAGAAACCAAGTCAATCAAGAAGGGAGGGATGATTTTACCATTTCAACCTCTTTCGCTA
GTTTTTGATGATATCAGATATGCAGTCGATGTGCCTCAGGATATAAAACCTCAAGGTGTT
TTGGAGGCCCGGTTAGAGCTTTTGAAGGGAATTAGTGGTGCTTTCCGTCCAGGAGTCCTT
ACAGCTCTAATGGGTATTAGTGGAGCTGGAAAAACCACTTTGATGGATGTTTTGGCTGGT
AGAAAGACACATGGATATATAGAAGGAAGCATAACTATATCAGGATATCCGAAGAAACAA
GAAACATTTGCACGAATTGCAGGATATTGTGAACAAACAGATATTCATTCTCCTAATCTA
ACAGTACATGAATCGTTGCAATTTTCAGCATGGCTTCGATTGCCTCAAGAAGTTGACAGC
GCAACTAGAAAGATGTTCATTGAAGAGGTGATGGATCTTGTGGAACTAACCCCACTGAAG
GAAGCACTTGTTGGATTACCCAGTGGGAGTGGTCTTTCGGTTGAGCAGCGCAAGCGACTT
ACTATAGCTGTTGAGCTTGTTGCCAATCCATCTATAATATTCATGGATGAACCAACCTCA
GGCCTCGATGCTAGAGCCGCTGCAATTGTCATGAGAACAGTTAGAAACACAGTTGATACT
GGTCGAACAGTCGTATGTACCATCCACCAACCCAGCATTGACATCTTTGATGCATTTGAC
GAGTTGGTGCTTCTAAAACAAGGAGGTGAAGAAATCTATGTTGGTCCATTAGGCCACCAT
TCGTCCGAGTTAATCAAATACTTTGAGGGAATAAACGGAGTACCTAAAATCAAGGATGGT
TATAATCCTGCCACTTGGGTGTTAGAGATCACATCAAAAGCACAAGAAGCTGCCCTTGGC
GTTAATTTTGCAGTACTATATAAAAGCTCAGAACTATACAGAAACAATAAATCTTTGATC
AGAGAAGCAAGTATATCAATCCCAGGTTCAAAAGAATTGAATTTTTCGACTAAGTACTCG
CGATCTTTCTTCAACCAATGCATAGCTTGCCTTTGGAAACAGCATTGGTCCTATTGGAGA
AATCCATCATACACTGCTGTGAGAATTCTTTTTACGTCGTTTACTGCCCTCATGTTTGGA
ACAGTTTTCTGGGATCTTGGCTCTAGAAGGAGAAGGAAGCAAGATCTTTTTAATGCTGCA
GGTTCCATGTATGCATCTGTTCTATTTCTCGGTATACAAAATGCTTCCGTAGCACAGCCA
GTTGTTTCCATTGAGAGAACAGTCTTCTATAGAGAAAGAGCTGCTGGCATGTATTCAGCT
TTTCCATATGCTTTTGGTCAGATTGTGATTGAGCTTCCTTACATTTTAGTTCAAACAGTT
GTGTTTGGCGTGATAGCGTATGGCATGATAGGATTTGAATGGACAATAGCCAAGTTCTTT
TGGTATCAATTCTTCATGTTTTTCACTTTGTTATACTTCACACTTTATGGGATGATGACA
GTAGCTGTTACTCCAAACCTGAGTGTTGCTGGAATAATATCAAATTTCTTTTACGCAATG
TGGAACCTCTTCTCCGGTTTTGTTGTTCCCAAAACAAGGATTCCACTGTGGTGGAGATGG
TACTATTATATATGTCCTGTCTCATGGACATTGTATGGATTAGTTGCTTCTCAGTTCGGG
GACTTAACGGATGAACTTGAGGAAAATTTAACACTCGAACAATTCGTGAAGAGTTATTTT
GGATTCGAGAGTGATTTTGTGCCATATGTTGCCATCATTGTCATCGCATTTTGTATCCTC
TTCGCCTTCATTTTTGCCTTCTCGATCAAGGCTTTTAACTTCCAGAGAAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400032813
PEP Infomation

pacid=37447397 transcript=PGSC0003DMT400048449 locus=PGSC0003DMG400018818 ID=PGSC0003DMT400048449.v4.03 annot-version=v4.03
Sequence

MDEFVPERTCAYISQDDVHLANLTVRETLEFSARCQGVGPRYEMLEELLKREKEANIKPD
PDIDMFMKAATVQGKEPNIITDYTLKILGLEICAETLVGDEMVRGISGGQLKRLTTGEMM
VGPARALFMDEISTGLDSSTTFQIVKSIRQSIHILKGTALISLLQPAPETYGLFDDVILL
ADGRIVYQGPREHVLEFFEFVGFKCPRRKGVADFLQEVTSRKDQEQYWARTDEPYKFVSS
REFFEAFQSFHVGRELANDLSVPFDKANKNPDALTTNKYGVKKRDLLKACMSREILLMKR
NIFVYLFKIIQHLLLASITMTLFLRIKMPKETQTDGFIFMGALFFTVIAAMFNGCSEVPF
TILKLPVFFKQHNLLFFPVWAYTLPAWIVKIPISIIESSIWVSITYYAIGFDPNIVRFSK
QLFLVICVDQMASGLFRFMAAVGRKMIIANTLGSLALLLALVMGGFIMDRDDVKKWWLWG
YWCSPMMYAQNAITVNEFLGNSWSNNVPGSTDTLGVVVLKSRAMFPDAHWYWIGVGAVLG
YVVFFNFMATLALTYLKPFGKSGAVLPDEKVVKRNTKIRNIDIKSSTGEMKNEGKRNAPI
RETKSIKKGGMILPFQPLSLVFDDIRYAVDVPQDIKPQGVLEARLELLKGISGAFRPGVL
TALMGISGAGKTTLMDVLAGRKTHGYIEGSITISGYPKKQETFARIAGYCEQTDIHSPNL
TVHESLQFSAWLRLPQEVDSATRKMFIEEVMDLVELTPLKEALVGLPSGSGLSVEQRKRL
TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFD
ELVLLKQGGEEIYVGPLGHHSSELIKYFEGINGVPKIKDGYNPATWVLEITSKAQEAALG
VNFAVLYKSSELYRNNKSLIREASISIPGSKELNFSTKYSRSFFNQCIACLWKQHWSYWR
NPSYTAVRILFTSFTALMFGTVFWDLGSRRRRKQDLFNAAGSMYASVLFLGIQNASVAQP
VVSIERTVFYRERAAGMYSAFPYAFGQIVIELPYILVQTVVFGVIAYGMIGFEWTIAKFF
WYQFFMFFTLLYFTLYGMMTVAVTPNLSVAGIISNFFYAMWNLFSGFVVPKTRIPLWWRW
YYYICPVSWTLYGLVASQFGDLTDELEENLTLEQFVKSYFGFESDFVPYVAIIVIAFCIL
FAFIFAFSIKAFNFQRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400048449
Transcript Infomation

pacid=37447397 locus=PGSC0003DMG400018818 ID=PGSC0003DMT400048449.v4.03 annot-version=v4.03
Sequence

ATGGATGAATTTGTACCAGAAAGAACATGTGCATATATAAGTCAAGATGATGTTCATCTA
GCAAATCTAACTGTGAGGGAGACTCTTGAATTTTCAGCTAGATGTCAAGGAGTTGGACCT
CGTTATGAGATGTTGGAAGAGTTGTTAAAGAGAGAAAAGGAAGCAAATATAAAGCCAGAT
CCTGATATTGACATGTTTATGAAGGCAGCAACAGTTCAAGGGAAAGAGCCAAATATAATA
ACAGATTATACACTCAAGATATTGGGTCTTGAGATATGTGCTGAGACACTAGTTGGTGAT
GAAATGGTACGAGGAATTTCTGGTGGACAGCTAAAGAGACTCACCACAGGAGAGATGATG
GTTGGACCAGCAAGAGCTCTATTTATGGATGAAATATCAACTGGATTAGACAGTTCAACA
ACCTTCCAAATCGTCAAATCCATTAGACAATCCATCCACATTCTTAAGGGAACTGCTCTT
ATCTCCCTTCTGCAGCCTGCACCAGAAACTTATGGCCTTTTTGATGACGTGATTCTTTTG
GCGGATGGGCGAATTGTGTATCAAGGTCCACGTGAACATGTTCTTGAATTCTTTGAGTTT
GTGGGGTTTAAATGTCCTCGGAGAAAGGGAGTAGCTGATTTCTTGCAAGAAGTGACCTCT
AGGAAAGATCAGGAGCAATACTGGGCAAGGACAGATGAGCCATACAAATTTGTTTCATCC
AGGGAGTTCTTTGAAGCATTTCAGTCCTTCCATGTCGGACGCGAACTTGCAAATGACCTT
TCTGTTCCTTTTGACAAGGCCAACAAGAATCCTGATGCTCTAACCACCAACAAGTATGGC
GTTAAAAAGAGGGATCTTTTGAAAGCTTGCATGTCAAGAGAAATCCTTCTCATGAAGAGG
AATATATTTGTCTACTTGTTCAAGATAATACAACATCTGTTATTGGCTTCTATAACAATG
ACACTGTTCCTGCGAATCAAGATGCCGAAGGAGACACAGACAGATGGATTCATCTTCATG
GGTGCATTGTTCTTTACAGTAATTGCAGCTATGTTCAATGGGTGCTCAGAGGTTCCTTTC
ACTATCTTGAAGCTTCCGGTCTTCTTCAAGCAGCACAACCTTCTCTTCTTTCCTGTATGG
GCTTATACTTTGCCTGCATGGATAGTCAAGATCCCAATCTCAATTATCGAGTCTTCCATT
TGGGTTTCTATCACATACTATGCAATAGGATTTGATCCAAACATTGTAAGGTTTTCCAAG
CAGTTATTTCTAGTGATATGTGTTGACCAGATGGCTTCTGGATTATTTCGCTTCATGGCA
GCTGTTGGAAGGAAAATGATAATCGCAAACACATTGGGATCGCTTGCATTACTTCTTGCT
CTTGTAATGGGTGGATTCATAATGGATCGAGATGATGTGAAAAAATGGTGGTTATGGGGT
TACTGGTGCTCTCCGATGATGTACGCACAGAACGCCATCACTGTAAATGAGTTTCTCGGC
AATAGTTGGAGTAATAATGTTCCTGGCTCAACAGATACACTAGGAGTTGTAGTGTTAAAG
TCTCGGGCAATGTTTCCTGATGCACACTGGTACTGGATTGGAGTAGGCGCAGTGCTAGGA
TACGTTGTATTTTTCAATTTTATGGCTACGTTGGCCTTAACTTACCTCAAGCCATTTGGA
AAATCTGGTGCAGTTTTGCCTGATGAAAAAGTTGTCAAAAGGAATACAAAGATACGGAAT
ATAGACATAAAGTCATCAACAGGAGAAATGAAAAATGAGGGCAAAAGAAATGCACCTATT
CGAGAAACCAAGTCAATCAAGAAGGGAGGGATGATTTTACCATTTCAACCTCTTTCGCTA
GTTTTTGATGATATCAGATATGCAGTCGATGTGCCTCAGGATATAAAACCTCAAGGTGTT
TTGGAGGCCCGGTTAGAGCTTTTGAAGGGAATTAGTGGTGCTTTCCGTCCAGGAGTCCTT
ACAGCTCTAATGGGTATTAGTGGAGCTGGAAAAACCACTTTGATGGATGTTTTGGCTGGT
AGAAAGACACATGGATATATAGAAGGAAGCATAACTATATCAGGATATCCGAAGAAACAA
GAAACATTTGCACGAATTGCAGGATATTGTGAACAAACAGATATTCATTCTCCTAATCTA
ACAGTACATGAATCGTTGCAATTTTCAGCATGGCTTCGATTGCCTCAAGAAGTTGACAGC
GCAACTAGAAAGATGTTCATTGAAGAGGTGATGGATCTTGTGGAACTAACCCCACTGAAG
GAAGCACTTGTTGGATTACCCAGTGGGAGTGGTCTTTCGGTTGAGCAGCGCAAGCGACTT
ACTATAGCTGTTGAGCTTGTTGCCAATCCATCTATAATATTCATGGATGAACCAACCTCA
GGCCTCGATGCTAGAGCCGCTGCAATTGTCATGAGAACAGTTAGAAACACAGTTGATACT
GGTCGAACAGTCGTATGTACCATCCACCAACCCAGCATTGACATCTTTGATGCATTTGAC
GAGTTGGTGCTTCTAAAACAAGGAGGTGAAGAAATCTATGTTGGTCCATTAGGCCACCAT
TCGTCCGAGTTAATCAAATACTTTGAGGGAATAAACGGAGTACCTAAAATCAAGGATGGT
TATAATCCTGCCACTTGGGTGTTAGAGATCACATCAAAAGCACAAGAAGCTGCCCTTGGC
GTTAATTTTGCAGTACTATATAAAAGCTCAGAACTATACAGAAACAATAAATCTTTGATC
AGAGAAGCAAGTATATCAATCCCAGGTTCAAAAGAATTGAATTTTTCGACTAAGTACTCG
CGATCTTTCTTCAACCAATGCATAGCTTGCCTTTGGAAACAGCATTGGTCCTATTGGAGA
AATCCATCATACACTGCTGTGAGAATTCTTTTTACGTCGTTTACTGCCCTCATGTTTGGA
ACAGTTTTCTGGGATCTTGGCTCTAGAAGGAGAAGGAAGCAAGATCTTTTTAATGCTGCA
GGTTCCATGTATGCATCTGTTCTATTTCTCGGTATACAAAATGCTTCCGTAGCACAGCCA
GTTGTTTCCATTGAGAGAACAGTCTTCTATAGAGAAAGAGCTGCTGGCATGTATTCAGCT
TTTCCATATGCTTTTGGTCAGATTGTGATTGAGCTTCCTTACATTTTAGTTCAAACAGTT
GTGTTTGGCGTGATAGCGTATGGCATGATAGGATTTGAATGGACAATAGCCAAGTTCTTT
TGGTATCAATTCTTCATGTTTTTCACTTTGTTATACTTCACACTTTATGGGATGATGACA
GTAGCTGTTACTCCAAACCTGAGTGTTGCTGGAATAATATCAAATTTCTTTTACGCAATG
TGGAACCTCTTCTCCGGTTTTGTTGTTCCCAAAACAAGGATTCCACTGTGGTGGAGATGG
TACTATTATATATGTCCTGTCTCATGGACATTGTATGGATTAGTTGCTTCTCAGTTCGGG
GACTTAACGGATGAACTTGAGGAAAATTTAACACTCGAACAATTCGTGAAGAGTTATTTT
GGATTCGAGAGTGATTTTGTGCCATATGTTGCCATCATTGTCATCGCATTTTGTATCCTC
TTCGCCTTCATTTTTGCCTTCTCGATCAAGGCTTTTAACTTCCAGAGAAAATAA