Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048435
CDS Infomation

pacid=37469269 polypeptide=PGSC0003DMP400032803 locus=PGSC0003DMG400018811 ID=PGSC0003DMT400048435.v4.03 annot-version=v4.03
Sequence

ATGACATCATTTTTACTTCAAAGATGTAATCTTTTCTTTGAGGTTCTTCTTCTTTTGGGG
TTCTTGAATTTCTTCAGCTTTGGTTCTGTGGTGTCTGATGATGGTTCTGCATTGTTGGAG
ATTAAGAAGTCAATTAGGGACGTGGAGAATGTGTTATATGACTGGACTGATTCTCCTTCA
TCTGATTACTGTGCCTGGAGAGGTGTTACCTGTGATAATGTCACCTTCAATGTTGTTCAA
CTTAATCTTTCGAGTTTAAATCTTGATGGGGAGTTGTCTCCTGCAATTGGACAGCTCAAA
GGCCTTATATCTATTGATGTAAGGGGAAATCGCCTTTCTGGCCAGATACCAGATGAGATT
GGTGACTGTTCAGCACTGAAAAACTTGGACCTATCCTTCAATGAGCTTTATGGTGATATT
CCCTTTTCCATATCAAAACTTAAGCAACTGGAATATCTGATTTTAAAGAATAATCAGTTG
ATTGGACCAATTCCATCTACATTGTCACAGATCCCCAACTTGAAGGTCTTGGACCTAGCT
CAAAATAGGTTAAGTGGAGAAATTCCTAGGCTGATATACTGGAATGAAGTCCTGCAGTAT
TTGGGACTGCGTGGCAACAACTTGGGTGGATCACTTTCTCCTGATATGTGTCAGCTCACC
GGCCTGTGGTACTTTGATGTTCGGAACAATAGTTTGACTGGTTCCATTCCTCAAAATATT
GGCAACTGTACTGCTTTCCAGGTTCTAGATTTGTCTTATAATGACTTGACTGGAGAGATT
CCTTTCAACATTGGTTTCCTGCAAGTAGCGACCTTGTCTTTGCAAGGTAATCGCCTTTCA
GGGCAGATCCCTTCTGTCATTGGATTGATGCAAGCTCTTGCAGTTTTGGACTTGAGCTGC
AATATGTTGAGTGGAACAATTCCTTCAATTCTTGGGAATTTGACTTACACAGAAAAATTG
TATCTACATGGGAACAAGCTATCTGGTTCCATTCCTCCAGAGCTGGGAAATATGACAAAG
CTTCACTACTTAGAATTGAATGATAACCAACTTACTGGACGCATACCACCAGAACTTGGA
AAGCTGACGGAGTTGTTTGACTTAAATGTTGCAAACAACCACCTTGATGGGCCCATACCT
TCCAATCTTAGCTCATGTACCAATTTGAATAGTCTCAACGTTCATGGAAACAAATTGAAT
GGTACAATTCCACCTGCTTTTCAAAAGCTGGAAAGTATGACCTATCTTAATCTCTCCTCC
AACAACCTCAAAGGCCCAATTCCAATTGAGCTTTCTCGTATTGGGAATGTAGATACACTG
GACTTATCAAACAACAGGATCAGTGGTCGTATACCTTTGTCCCTCGGTGATTTGGAACAT
CTTCTTAAACTGAACTTAAGCAAGAACGAAATAAATGGAAACTTGCCAGCTGAATTTGGC
AATTTAAGGAGCATCATGGAGATTGATCTGTCAAGCAATCACCTCTCTGGTCCCTTGCCT
CAGGAACTTGGTCAGCTTCCAAATCTGTACTTGCTGAAACTGGAAAACAACAATTTATCA
GGCGATGTGATGTCCTTAGCCAGTTGTCTCAGTCTAAATGTCCTAAATGTCTCATACAAT
AATCTGGGAGGGAATATTCCAACAGGCAATAATTTCTCTAGATTTTCACCAGACAGCTTC
ATAGGAAATCCAGATCTGTGTGGGTATTGGCTCACTTCTCCCTGTCATGCATCTCATCCA
GCAGAGCGAGTTTCAATTTCTAAAGCTGCTATACTTGGTATTGCTCTGGGTGGCTTGGTG
ATTCTTCTGATGATACTAGTAGCAGCATGCCGGCCACAGAATCCTGCACCTTTCATGGAA
GGATCTATTGATAAACCAGTTTATTACTCATCTCCAAAGCTTGTGATCCTTCATATGAAC
ATGGCACTTCATGTTTACGAGGACATTATGAGGATGACTGAGAACTTGAGTGAGAAGTAT
ATAATTGGTTGTGGAGCATCAAGTACTGTATATAAATGTGTTTTGAAAAATTGCAAACCT
GTAGCTATCAAGAAATTGTACTCTCACAACCCGCAATACTTGAAGGAGTTTGAGACTGAA
CTTGAGACAGTTGGGAGTATTAAGCATCGTAATCTTGTCTGCCTCCAAGGATATTCTCTT
TCTCCATCTGGCCATCTTCTTTTCTATGACTACATGGAAAATGGTAGCCTTTGGGATTTG
CTTCATGGTCCTACAACAAAGAAGAAAAAACTTGATTGGGTTACTCGCCTTCGAATTGCA
TTGGGATCAGCTCAAGGGCTTGCTTATCTTCACCATGATTGTAGCCCTCGAATTATCCAC
CGTGATGTTAAATCATCAAATATCTTGTTGGACAAAGACTTTGAGGCTCATCTGACTGAT
TTTGGCATTGCCAAAAGCTTATGCATATCAAAGACCTATACGTCCACATACATTATGGGA
ACCATTGGTTACATTGATCCAGAGTATGCTCGCACTTCTCGCTTGACAGAGAAGTCTGAT
GTTTACAGCTATGGAATTGTTCTATTGGAATTGCTCACTGGAAGGAAAGCTGTAGATAAT
GAATCTAATCTACACCATATGATTCTAACTAAGGCAGCAAACAATGCTGTAATGGAAACA
GTGGATCCTGAGATCACAGGCACATGCAAAGATCTTGCAGATGTGAAGAAGGTTTTTCAG
CTTGCCCTTCTATGTTCCAAAAGACAGCCTGCTGAGAGACCAACAATGCATGAAGTGGCA
AGAGTACTTGAAAGCCTAATACCCGTCGCTGAAACGAAACAGCCAAATCCAACCCCCTCA
CTTGCATTACTTCCATCTGCTAAGGTACCTTGTTACATGGATGAATATGTCAACCTCAAG
ACACCCCATCTAGTGAATTGTTCATCCATGAGCACTTCAGATGCCCAACTTTTCCTCAAG
TTTGGAGAGGTCATATCCCAGAATAGTGGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032803
PEP Infomation

pacid=37469269 transcript=PGSC0003DMT400048435 locus=PGSC0003DMG400018811 ID=PGSC0003DMT400048435.v4.03 annot-version=v4.03
Sequence

MTSFLLQRCNLFFEVLLLLGFLNFFSFGSVVSDDGSALLEIKKSIRDVENVLYDWTDSPS
SDYCAWRGVTCDNVTFNVVQLNLSSLNLDGELSPAIGQLKGLISIDVRGNRLSGQIPDEI
GDCSALKNLDLSFNELYGDIPFSISKLKQLEYLILKNNQLIGPIPSTLSQIPNLKVLDLA
QNRLSGEIPRLIYWNEVLQYLGLRGNNLGGSLSPDMCQLTGLWYFDVRNNSLTGSIPQNI
GNCTAFQVLDLSYNDLTGEIPFNIGFLQVATLSLQGNRLSGQIPSVIGLMQALAVLDLSC
NMLSGTIPSILGNLTYTEKLYLHGNKLSGSIPPELGNMTKLHYLELNDNQLTGRIPPELG
KLTELFDLNVANNHLDGPIPSNLSSCTNLNSLNVHGNKLNGTIPPAFQKLESMTYLNLSS
NNLKGPIPIELSRIGNVDTLDLSNNRISGRIPLSLGDLEHLLKLNLSKNEINGNLPAEFG
NLRSIMEIDLSSNHLSGPLPQELGQLPNLYLLKLENNNLSGDVMSLASCLSLNVLNVSYN
NLGGNIPTGNNFSRFSPDSFIGNPDLCGYWLTSPCHASHPAERVSISKAAILGIALGGLV
ILLMILVAACRPQNPAPFMEGSIDKPVYYSSPKLVILHMNMALHVYEDIMRMTENLSEKY
IIGCGASSTVYKCVLKNCKPVAIKKLYSHNPQYLKEFETELETVGSIKHRNLVCLQGYSL
SPSGHLLFYDYMENGSLWDLLHGPTTKKKKLDWVTRLRIALGSAQGLAYLHHDCSPRIIH
RDVKSSNILLDKDFEAHLTDFGIAKSLCISKTYTSTYIMGTIGYIDPEYARTSRLTEKSD
VYSYGIVLLELLTGRKAVDNESNLHHMILTKAANNAVMETVDPEITGTCKDLADVKKVFQ
LALLCSKRQPAERPTMHEVARVLESLIPVAETKQPNPTPSLALLPSAKVPCYMDEYVNLK
TPHLVNCSSMSTSDAQLFLKFGEVISQNSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400048435
Transcript Infomation

pacid=37469269 locus=PGSC0003DMG400018811 ID=PGSC0003DMT400048435.v4.03 annot-version=v4.03
Sequence

ATGACATCATTTTTACTTCAAAGATGTAATCTTTTCTTTGAGGTTCTTCTTCTTTTGGGG
TTCTTGAATTTCTTCAGCTTTGGTTCTGTGGTGTCTGATGATGGTTCTGCATTGTTGGAG
ATTAAGAAGTCAATTAGGGACGTGGAGAATGTGTTATATGACTGGACTGATTCTCCTTCA
TCTGATTACTGTGCCTGGAGAGGTGTTACCTGTGATAATGTCACCTTCAATGTTGTTCAA
CTTAATCTTTCGAGTTTAAATCTTGATGGGGAGTTGTCTCCTGCAATTGGACAGCTCAAA
GGCCTTATATCTATTGATGTAAGGGGAAATCGCCTTTCTGGCCAGATACCAGATGAGATT
GGTGACTGTTCAGCACTGAAAAACTTGGACCTATCCTTCAATGAGCTTTATGGTGATATT
CCCTTTTCCATATCAAAACTTAAGCAACTGGAATATCTGATTTTAAAGAATAATCAGTTG
ATTGGACCAATTCCATCTACATTGTCACAGATCCCCAACTTGAAGGTCTTGGACCTAGCT
CAAAATAGGTTAAGTGGAGAAATTCCTAGGCTGATATACTGGAATGAAGTCCTGCAGTAT
TTGGGACTGCGTGGCAACAACTTGGGTGGATCACTTTCTCCTGATATGTGTCAGCTCACC
GGCCTGTGGTACTTTGATGTTCGGAACAATAGTTTGACTGGTTCCATTCCTCAAAATATT
GGCAACTGTACTGCTTTCCAGGTTCTAGATTTGTCTTATAATGACTTGACTGGAGAGATT
CCTTTCAACATTGGTTTCCTGCAAGTAGCGACCTTGTCTTTGCAAGGTAATCGCCTTTCA
GGGCAGATCCCTTCTGTCATTGGATTGATGCAAGCTCTTGCAGTTTTGGACTTGAGCTGC
AATATGTTGAGTGGAACAATTCCTTCAATTCTTGGGAATTTGACTTACACAGAAAAATTG
TATCTACATGGGAACAAGCTATCTGGTTCCATTCCTCCAGAGCTGGGAAATATGACAAAG
CTTCACTACTTAGAATTGAATGATAACCAACTTACTGGACGCATACCACCAGAACTTGGA
AAGCTGACGGAGTTGTTTGACTTAAATGTTGCAAACAACCACCTTGATGGGCCCATACCT
TCCAATCTTAGCTCATGTACCAATTTGAATAGTCTCAACGTTCATGGAAACAAATTGAAT
GGTACAATTCCACCTGCTTTTCAAAAGCTGGAAAGTATGACCTATCTTAATCTCTCCTCC
AACAACCTCAAAGGCCCAATTCCAATTGAGCTTTCTCGTATTGGGAATGTAGATACACTG
GACTTATCAAACAACAGGATCAGTGGTCGTATACCTTTGTCCCTCGGTGATTTGGAACAT
CTTCTTAAACTGAACTTAAGCAAGAACGAAATAAATGGAAACTTGCCAGCTGAATTTGGC
AATTTAAGGAGCATCATGGAGATTGATCTGTCAAGCAATCACCTCTCTGGTCCCTTGCCT
CAGGAACTTGGTCAGCTTCCAAATCTGTACTTGCTGAAACTGGAAAACAACAATTTATCA
GGCGATGTGATGTCCTTAGCCAGTTGTCTCAGTCTAAATGTCCTAAATGTCTCATACAAT
AATCTGGGAGGGAATATTCCAACAGGCAATAATTTCTCTAGATTTTCACCAGACAGCTTC
ATAGGAAATCCAGATCTGTGTGGGTATTGGCTCACTTCTCCCTGTCATGCATCTCATCCA
GCAGAGCGAGTTTCAATTTCTAAAGCTGCTATACTTGGTATTGCTCTGGGTGGCTTGGTG
ATTCTTCTGATGATACTAGTAGCAGCATGCCGGCCACAGAATCCTGCACCTTTCATGGAA
GGATCTATTGATAAACCAGTTTATTACTCATCTCCAAAGCTTGTGATCCTTCATATGAAC
ATGGCACTTCATGTTTACGAGGACATTATGAGGATGACTGAGAACTTGAGTGAGAAGTAT
ATAATTGGTTGTGGAGCATCAAGTACTGTATATAAATGTGTTTTGAAAAATTGCAAACCT
GTAGCTATCAAGAAATTGTACTCTCACAACCCGCAATACTTGAAGGAGTTTGAGACTGAA
CTTGAGACAGTTGGGAGTATTAAGCATCGTAATCTTGTCTGCCTCCAAGGATATTCTCTT
TCTCCATCTGGCCATCTTCTTTTCTATGACTACATGGAAAATGGTAGCCTTTGGGATTTG
CTTCATGGTCCTACAACAAAGAAGAAAAAACTTGATTGGGTTACTCGCCTTCGAATTGCA
TTGGGATCAGCTCAAGGGCTTGCTTATCTTCACCATGATTGTAGCCCTCGAATTATCCAC
CGTGATGTTAAATCATCAAATATCTTGTTGGACAAAGACTTTGAGGCTCATCTGACTGAT
TTTGGCATTGCCAAAAGCTTATGCATATCAAAGACCTATACGTCCACATACATTATGGGA
ACCATTGGTTACATTGATCCAGAGTATGCTCGCACTTCTCGCTTGACAGAGAAGTCTGAT
GTTTACAGCTATGGAATTGTTCTATTGGAATTGCTCACTGGAAGGAAAGCTGTAGATAAT
GAATCTAATCTACACCATATGATTCTAACTAAGGCAGCAAACAATGCTGTAATGGAAACA
GTGGATCCTGAGATCACAGGCACATGCAAAGATCTTGCAGATGTGAAGAAGGTTTTTCAG
CTTGCCCTTCTATGTTCCAAAAGACAGCCTGCTGAGAGACCAACAATGCATGAAGTGGCA
AGAGTACTTGAAAGCCTAATACCCGTCGCTGAAACGAAACAGCCAAATCCAACCCCCTCA
CTTGCATTACTTCCATCTGCTAAGGTACCTTGTTACATGGATGAATATGTCAACCTCAAG
ACACCCCATCTAGTGAATTGTTCATCCATGAGCACTTCAGATGCCCAACTTTTCCTCAAG
TTTGGAGAGGTCATATCCCAGAATAGTGGCTGA