Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048357
CDS Infomation

pacid=37448622 polypeptide=PGSC0003DMP400032745 locus=PGSC0003DMG400018789 ID=PGSC0003DMT400048357.v4.03 annot-version=v4.03
Sequence

ATGTCTAGCCAAAAATTTGTTCGTCCAATTTTTGACAATCCCTTTTTCAACATTGAAGAA
TTACCAAATGATACAATTAAACGTAAACCTGAACCCCTCATACCAGCCAATTCTGATCCC
AATGGTACTTCCTTAGTCATATCTAAAGACGTAGACCTTGACATCAACAAAAAAACATGG
CTACGAATATACGTCCCACGACGAATAATTGCAAATCATGATGATGATAAATTGCCTGTC
ATTTTCTACTATCATGGTGGAGGATTTGTTTTCTTTCATGCTAATAGTTATGGTTGGGAT
CTCTTTTGTCAGGCACTTGCTGAGAAACTTGGCGCGATGGTTATCGCCCTTGAATATCGT
TTGGCCCCTGAAAATCGACTCCCTGCAGCTTACGAAGATGCCATTGACGGGTTAAATTGG
ATTAAATCAACTCAAGATGAATGGATTCGAAATTATTCTGATTTGAGTAACGTTTATCTT
TTTGGATCCAGTTCTGGTGGAAACATGGCTTACCATGCAGGGTTACGCGTAGCATCTTTA
TCATACAAGGAACTAGAGCCAGTGAAGATCAAAGGGCTAATTTTGCATCAACCATATTTT
AGTGGCAAAAACAGGACAGAATCTGAAGAGAAGCTAAAGGATGATCAACTTTTGCCATTA
CATGCAATTGACAAGATGTTTGACTTGTCCTTACCAAAAGGAACACTAGATCATGATCAT
GAATATTCCAATCCATTTCTTAACGGAGGGTCAAAGCATTTAGATGATATGGTCACACGA
GGCTGGGGGATCCTTGTAACCGGTGTCTCTGAAGATCCTTTGGTTGATGGCGCGCGCAAC
TTTGCTAATTTTGTGGAAGAGAAAGGTATAAAAACTTTCAAGCTCTTTGGAGATGGTTAC
CATGTTGTTGAGTTGTTTGAGCCATCTATGGCTGCAGTCTTATTTGATGCCACCAGGGAT
TTCATATCTGCTACTAAAAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400032745
PEP Infomation

pacid=37448622 transcript=PGSC0003DMT400048357 locus=PGSC0003DMG400018789 ID=PGSC0003DMT400048357.v4.03 annot-version=v4.03
Sequence

MSSQKFVRPIFDNPFFNIEELPNDTIKRKPEPLIPANSDPNGTSLVISKDVDLDINKKTW
LRIYVPRRIIANHDDDKLPVIFYYHGGGFVFFHANSYGWDLFCQALAEKLGAMVIALEYR
LAPENRLPAAYEDAIDGLNWIKSTQDEWIRNYSDLSNVYLFGSSSGGNMAYHAGLRVASL
SYKELEPVKIKGLILHQPYFSGKNRTESEEKLKDDQLLPLHAIDKMFDLSLPKGTLDHDH
EYSNPFLNGGSKHLDDMVTRGWGILVTGVSEDPLVDGARNFANFVEEKGIKTFKLFGDGY
HVVELFEPSMAAVLFDATRDFISATKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400048357
Transcript Infomation

pacid=37448622 locus=PGSC0003DMG400018789 ID=PGSC0003DMT400048357.v4.03 annot-version=v4.03
Sequence

ATGTCTAGCCAAAAATTTGTTCGTCCAATTTTTGACAATCCCTTTTTCAACATTGAAGAA
TTACCAAATGATACAATTAAACGTAAACCTGAACCCCTCATACCAGCCAATTCTGATCCC
AATGGTACTTCCTTAGTCATATCTAAAGACGTAGACCTTGACATCAACAAAAAAACATGG
CTACGAATATACGTCCCACGACGAATAATTGCAAATCATGATGATGATAAATTGCCTGTC
ATTTTCTACTATCATGGTGGAGGATTTGTTTTCTTTCATGCTAATAGTTATGGTTGGGAT
CTCTTTTGTCAGGCACTTGCTGAGAAACTTGGCGCGATGGTTATCGCCCTTGAATATCGT
TTGGCCCCTGAAAATCGACTCCCTGCAGCTTACGAAGATGCCATTGACGGGTTAAATTGG
ATTAAATCAACTCAAGATGAATGGATTCGAAATTATTCTGATTTGAGTAACGTTTATCTT
TTTGGATCCAGTTCTGGTGGAAACATGGCTTACCATGCAGGGTTACGCGTAGCATCTTTA
TCATACAAGGAACTAGAGCCAGTGAAGATCAAAGGGCTAATTTTGCATCAACCATATTTT
AGTGGCAAAAACAGGACAGAATCTGAAGAGAAGCTAAAGGATGATCAACTTTTGCCATTA
CATGCAATTGACAAGATGTTTGACTTGTCCTTACCAAAAGGAACACTAGATCATGATCAT
GAATATTCCAATCCATTTCTTAACGGAGGGTCAAAGCATTTAGATGATATGGTCACACGA
GGCTGGGGGATCCTTGTAACCGGTGTCTCTGAAGATCCTTTGGTTGATGGCGCGCGCAAC
TTTGCTAATTTTGTGGAAGAGAAAGGTATAAAAACTTTCAAGCTCTTTGGAGATGGTTAC
CATGTTGTTGAGTTGTTTGAGCCATCTATGGCTGCAGTCTTATTTGATGCCACCAGGGAT
TTCATATCTGCTACTAAAAATTAA