Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048280
CDS Infomation

pacid=37434379 polypeptide=PGSC0003DMP400032693 locus=PGSC0003DMG402018758 ID=PGSC0003DMT400048280.v4.03 annot-version=v4.03
Sequence

ATGGCAGGAGGAGGAATTGCTTCAATTGGTGTAAACAAAGAAAGAGCTGAAAATTACAAT
GGAAAACTCACTCTTTATGTCATCATAGCATGTATTGTTGCTGCTGTTGGAGGTTCACTC
TTTGGATATGATATTGGAATTTCAGGGGGAGTGACATCGATGGATGAATTTCTTCGACGA
TTCTTCTACTCTGTATACCTAAAGAAGCAGCACGTCCACGAAGACAACTATTGCAAGTAT
AATAACCAAGTTCTTGCTGCATTTACCTCGTCTTTGTACATGGCTGGTTTAGTTGCATCT
CTGGTAGCATCTCCTATCACAAGGAATCATGGACGTCGTGCAAGTATAATATGCGGTGGC
ATTAGTTTCTTTCTTGGAGCAGTTCTTAATGCCGCTGCTATCAACCTTGGCATGCTTCTT
TTCGGACGAATTATGCTAGGTGTTGGCATTGGCTTTGGCAACCAGGCAGTTCCGTTGTAT
TTATCAGAGATGGCACCAGCACACCTAAGAGGATGTCTGAACATGATGTTTCAATTAGCA
ACAACGCTCGGAATCTTTACAGCAAACATGATAAACTATGGAACAAGTAAACTCCATCCA
TGGGGATGGAGACTTTCATTAGGCTTAGCAGCAGCGCCGGCTTTCGTTATGACAGTGGGA
GGCATGCTTCTTCCCGAGACACCGAACAGCTTAATAGAACAAGGAAACAAAACTAAAGGA
AGACGTGTTTTAGAGAGGATAAGAGGAACCGAGAATGTAGACGCAGAATTCGAAGACATG
GTGGATGCAAGTGAATTAGCACGTTTGGTTAAGCATCCGTTTAGAAACATTCTTAAAAGG
AGAAACAGGCCGCAGTTAATTATGGCGATTTTGATGCCGACTTTTCAGATACTTACAGGC
ATTAACATCATACTTTTTTATGCCCCAGTATTGTTTCAGAGTATGGGGTTTAAAAGATCT
GCCTCTCTGTATTCCTCTGCTTTGACTGGTGCAGTTCTTGCTTCATCTACACTTGTATCG
ATGGCCACTGTCGATAGATGGGGTCGAAGAATTCTTCTTATTACCGGTGGAATCCAAATG
ATCATTTGCCAGGTTATTGTTGCGATAATCTTGGGACTCAAATTTGGTAGTGACAAGGAG
CTATCAAGAGGTTACTCGATTATAGTAGTTGTTTTCATTTGCCTCTTTGTAGCTGCATTT
GGATACTCATGGGGGCCTCTTGGATGGACAGTGCCAAGTGAAATTTTCCCCTTAGAGACA
AGATCAGCAGGCCAAAGTATCACAGTTACTGTGAATTTGTTCTTCACATTTGCAATAGCA
CAATCTTTCCTCTCACTTTTATGTGTTATGAGGTTCGGGATTTTCCTCTTTTTCTCCGGT
TGGATTGCTATCATGACGATCTTCATCTATCTCTTCTTGCCCGAAACAAAGGGAGTTCCG
ATTGAAGAAATGATGCGTCTTTGGGAAAAGCATTGGTTCTGGAAGAAAATCGTCTCGGAG
GAGCAACAAGCTAAAAACACCAATGGACTCAATCATGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032693
PEP Infomation

pacid=37434379 transcript=PGSC0003DMT400048280 locus=PGSC0003DMG402018758 ID=PGSC0003DMT400048280.v4.03 annot-version=v4.03
Sequence

MAGGGIASIGVNKERAENYNGKLTLYVIIACIVAAVGGSLFGYDIGISGGVTSMDEFLRR
FFYSVYLKKQHVHEDNYCKYNNQVLAAFTSSLYMAGLVASLVASPITRNHGRRASIICGG
ISFFLGAVLNAAAINLGMLLFGRIMLGVGIGFGNQAVPLYLSEMAPAHLRGCLNMMFQLA
TTLGIFTANMINYGTSKLHPWGWRLSLGLAAAPAFVMTVGGMLLPETPNSLIEQGNKTKG
RRVLERIRGTENVDAEFEDMVDASELARLVKHPFRNILKRRNRPQLIMAILMPTFQILTG
INIILFYAPVLFQSMGFKRSASLYSSALTGAVLASSTLVSMATVDRWGRRILLITGGIQM
IICQVIVAIILGLKFGSDKELSRGYSIIVVVFICLFVAAFGYSWGPLGWTVPSEIFPLET
RSAGQSITVTVNLFFTFAIAQSFLSLLCVMRFGIFLFFSGWIAIMTIFIYLFLPETKGVP
IEEMMRLWEKHWFWKKIVSEEQQAKNTNGLNHA*

Transcript Sequence

Transcript ID

PGSC0003DMT400048280
Transcript Infomation

pacid=37434379 locus=PGSC0003DMG402018758 ID=PGSC0003DMT400048280.v4.03 annot-version=v4.03
Sequence

ATGGCAGGAGGAGGAATTGCTTCAATTGGTGTAAACAAAGAAAGAGCTGAAAATTACAAT
GGAAAACTCACTCTTTATGTCATCATAGCATGTATTGTTGCTGCTGTTGGAGGTTCACTC
TTTGGATATGATATTGGAATTTCAGGGGGAGTGACATCGATGGATGAATTTCTTCGACGA
TTCTTCTACTCTGTATACCTAAAGAAGCAGCACGTCCACGAAGACAACTATTGCAAGTAT
AATAACCAAGTTCTTGCTGCATTTACCTCGTCTTTGTACATGGCTGGTTTAGTTGCATCT
CTGGTAGCATCTCCTATCACAAGGAATCATGGACGTCGTGCAAGTATAATATGCGGTGGC
ATTAGTTTCTTTCTTGGAGCAGTTCTTAATGCCGCTGCTATCAACCTTGGCATGCTTCTT
TTCGGACGAATTATGCTAGGTGTTGGCATTGGCTTTGGCAACCAGGCAGTTCCGTTGTAT
TTATCAGAGATGGCACCAGCACACCTAAGAGGATGTCTGAACATGATGTTTCAATTAGCA
ACAACGCTCGGAATCTTTACAGCAAACATGATAAACTATGGAACAAGTAAACTCCATCCA
TGGGGATGGAGACTTTCATTAGGCTTAGCAGCAGCGCCGGCTTTCGTTATGACAGTGGGA
GGCATGCTTCTTCCCGAGACACCGAACAGCTTAATAGAACAAGGAAACAAAACTAAAGGA
AGACGTGTTTTAGAGAGGATAAGAGGAACCGAGAATGTAGACGCAGAATTCGAAGACATG
GTGGATGCAAGTGAATTAGCACGTTTGGTTAAGCATCCGTTTAGAAACATTCTTAAAAGG
AGAAACAGGCCGCAGTTAATTATGGCGATTTTGATGCCGACTTTTCAGATACTTACAGGC
ATTAACATCATACTTTTTTATGCCCCAGTATTGTTTCAGAGTATGGGGTTTAAAAGATCT
GCCTCTCTGTATTCCTCTGCTTTGACTGGTGCAGTTCTTGCTTCATCTACACTTGTATCG
ATGGCCACTGTCGATAGATGGGGTCGAAGAATTCTTCTTATTACCGGTGGAATCCAAATG
ATCATTTGCCAGGTTATTGTTGCGATAATCTTGGGACTCAAATTTGGTAGTGACAAGGAG
CTATCAAGAGGTTACTCGATTATAGTAGTTGTTTTCATTTGCCTCTTTGTAGCTGCATTT
GGATACTCATGGGGGCCTCTTGGATGGACAGTGCCAAGTGAAATTTTCCCCTTAGAGACA
AGATCAGCAGGCCAAAGTATCACAGTTACTGTGAATTTGTTCTTCACATTTGCAATAGCA
CAATCTTTCCTCTCACTTTTATGTGTTATGAGGTTCGGGATTTTCCTCTTTTTCTCCGGT
TGGATTGCTATCATGACGATCTTCATCTATCTCTTCTTGCCCGAAACAAAGGGAGTTCCG
ATTGAAGAAATGATGCGTCTTTGGGAAAAGCATTGGTTCTGGAAGAAAATCGTCTCGGAG
GAGCAACAAGCTAAAAACACCAATGGACTCAATCATGCTTGA