Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048275
CDS Infomation

pacid=37434273 polypeptide=PGSC0003DMP400032688 locus=PGSC0003DMG400018756 ID=PGSC0003DMT400048275.v4.03 annot-version=v4.03
Sequence

ATGGCGCGTTATACTTGTATATTCTTTGTCCTTTTCTTCTTTATTTCAACTCTCTTCTTT
TTCAGCAGAAAAATTGTTCAACCTACTCAAATACTCTCTGTTTACAGAGATACCCTTTCT
CAAACCCCTATATTCTTGCAAAATCAGACCCCCATTTCACCAAAATCTGATCTTGATGAT
AGTTTGGTTAACCCCATTTCACCAAAGACTTCTACAGAGATACCCATTTTGCCAAAATCT
GATTTTGATGGTAGTTTGGTTGAATCAGAGACCATTTCTAGTTCTAGTGAGACATCAAGA
TTTAAAGGACTTGAGGCTAATACAGAGATACCCATTTTGCCAAAATCTGATTTTGATGGT
AGTTTGGTTGAATCAGAGACCATCTCTAGTTCTAATGAGACATCAAGGTTTCAAGGACTA
GAGGTTAATACAGAGATACCCATTTTGGCAAAAACTGATTTTGATGATAATTTGGTTAAA
CCTATTTCACCTGAGACTAGTTCTAGTTCTAGTGAGAAGTCAAAATCTGATCTTGATGTA
ACATCAGAAACACCCAAATCTAGTTTAGTTGAGAAAAAGTCAAGACCCATTGGAGAAAGT
TGTGATCTTTTTAAGGGAAGTTGGGTGAAAGATGAGAATCATCCAATTTATAAACCAGGG
TCTTGCCCTTATGTGGATGAGGCTTTTGATTGTCAGACTAATGGTAGGCCAGACTCACAA
TATCTTAAATGGACATGGAAGCCACATGGATGTCATCTTCCAAGGTTTAGTCCATCAGAT
TTTTTGAAGAGATTGAAAGGAAAGAGGCTGATGCTGGTTGGGGACTCAATGAACCGGAAC
CAGTTCGAATCTCTCCTTTGCCTTCTTCGTGAAGGCCTCGCTAATAAGAGTAAAATGTAC
GAGATCCATGGGTATAAGATAACAAAAGGAAGAGGCTATTATGTTTTCAAATTTGAGGAT
TATAACTGCACAGTTGAATTCGTGCGCTCACACTTCCTTGCTAGAGAAGGAGTACGTATC
AATCCTCAAGGAAGCTCAAATCCAACTCTATCTATAGATCGCATAGACAAAACATCTAAG
CGTTGGAAGGGAGCTGACATTCTTATCTTCAATACAGGGCATTGGTGGACTCATGGAAAG
ACTGCCAGGGGGAAAAATTATTATAAAGAAGGTGACCAAGTATACCCTAAATTTGATGCC
GTTGAAGCTTATAGGAGAGCATTGAAGACCTGGGCTAAGTGGATTGACGAAAACATGAAC
CGTGAAAAGTTGATTATATATCGTGGGTACTCTTCAGCTCATTATAGAGGCGGAGATTGG
GATTCAGGTGGAAGTTGTAATAAAGAGAGTGAACCTGTTTCGAAAGGTGCTATCCTTGGA
AACTATCCTTTAAAAATGAAGATTGTGGAGGAGGTGATTAAGGAAATGCAGTTTCCAGTA
GTCCTTTTAAACGTAACACAGTCAACAAATTTCCGCAAGGATGGCCACCCGTCTGTGTAT
GGTAAGGTTGGTAAAAAGGGTAAGCAAGATTGTAGCCATTGGTGTCTACCGGGAGTCCCC
GATGCATGGAATGAGCTAATCTATGCCACTTTGGTGTTGCAACAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400032688
PEP Infomation

pacid=37434273 transcript=PGSC0003DMT400048275 locus=PGSC0003DMG400018756 ID=PGSC0003DMT400048275.v4.03 annot-version=v4.03
Sequence

MARYTCIFFVLFFFISTLFFFSRKIVQPTQILSVYRDTLSQTPIFLQNQTPISPKSDLDD
SLVNPISPKTSTEIPILPKSDFDGSLVESETISSSSETSRFKGLEANTEIPILPKSDFDG
SLVESETISSSNETSRFQGLEVNTEIPILAKTDFDDNLVKPISPETSSSSSEKSKSDLDV
TSETPKSSLVEKKSRPIGESCDLFKGSWVKDENHPIYKPGSCPYVDEAFDCQTNGRPDSQ
YLKWTWKPHGCHLPRFSPSDFLKRLKGKRLMLVGDSMNRNQFESLLCLLREGLANKSKMY
EIHGYKITKGRGYYVFKFEDYNCTVEFVRSHFLAREGVRINPQGSSNPTLSIDRIDKTSK
RWKGADILIFNTGHWWTHGKTARGKNYYKEGDQVYPKFDAVEAYRRALKTWAKWIDENMN
REKLIIYRGYSSAHYRGGDWDSGGSCNKESEPVSKGAILGNYPLKMKIVEEVIKEMQFPV
VLLNVTQSTNFRKDGHPSVYGKVGKKGKQDCSHWCLPGVPDAWNELIYATLVLQQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400048275
Transcript Infomation

pacid=37434273 locus=PGSC0003DMG400018756 ID=PGSC0003DMT400048275.v4.03 annot-version=v4.03
Sequence

ATGGCGCGTTATACTTGTATATTCTTTGTCCTTTTCTTCTTTATTTCAACTCTCTTCTTT
TTCAGCAGAAAAATTGTTCAACCTACTCAAATACTCTCTGTTTACAGAGATACCCTTTCT
CAAACCCCTATATTCTTGCAAAATCAGACCCCCATTTCACCAAAATCTGATCTTGATGAT
AGTTTGGTTAACCCCATTTCACCAAAGACTTCTACAGAGATACCCATTTTGCCAAAATCT
GATTTTGATGGTAGTTTGGTTGAATCAGAGACCATTTCTAGTTCTAGTGAGACATCAAGA
TTTAAAGGACTTGAGGCTAATACAGAGATACCCATTTTGCCAAAATCTGATTTTGATGGT
AGTTTGGTTGAATCAGAGACCATCTCTAGTTCTAATGAGACATCAAGGTTTCAAGGACTA
GAGGTTAATACAGAGATACCCATTTTGGCAAAAACTGATTTTGATGATAATTTGGTTAAA
CCTATTTCACCTGAGACTAGTTCTAGTTCTAGTGAGAAGTCAAAATCTGATCTTGATGTA
ACATCAGAAACACCCAAATCTAGTTTAGTTGAGAAAAAGTCAAGACCCATTGGAGAAAGT
TGTGATCTTTTTAAGGGAAGTTGGGTGAAAGATGAGAATCATCCAATTTATAAACCAGGG
TCTTGCCCTTATGTGGATGAGGCTTTTGATTGTCAGACTAATGGTAGGCCAGACTCACAA
TATCTTAAATGGACATGGAAGCCACATGGATGTCATCTTCCAAGGTTTAGTCCATCAGAT
TTTTTGAAGAGATTGAAAGGAAAGAGGCTGATGCTGGTTGGGGACTCAATGAACCGGAAC
CAGTTCGAATCTCTCCTTTGCCTTCTTCGTGAAGGCCTCGCTAATAAGAGTAAAATGTAC
GAGATCCATGGGTATAAGATAACAAAAGGAAGAGGCTATTATGTTTTCAAATTTGAGGAT
TATAACTGCACAGTTGAATTCGTGCGCTCACACTTCCTTGCTAGAGAAGGAGTACGTATC
AATCCTCAAGGAAGCTCAAATCCAACTCTATCTATAGATCGCATAGACAAAACATCTAAG
CGTTGGAAGGGAGCTGACATTCTTATCTTCAATACAGGGCATTGGTGGACTCATGGAAAG
ACTGCCAGGGGGAAAAATTATTATAAAGAAGGTGACCAAGTATACCCTAAATTTGATGCC
GTTGAAGCTTATAGGAGAGCATTGAAGACCTGGGCTAAGTGGATTGACGAAAACATGAAC
CGTGAAAAGTTGATTATATATCGTGGGTACTCTTCAGCTCATTATAGAGGCGGAGATTGG
GATTCAGGTGGAAGTTGTAATAAAGAGAGTGAACCTGTTTCGAAAGGTGCTATCCTTGGA
AACTATCCTTTAAAAATGAAGATTGTGGAGGAGGTGATTAAGGAAATGCAGTTTCCAGTA
GTCCTTTTAAACGTAACACAGTCAACAAATTTCCGCAAGGATGGCCACCCGTCTGTGTAT
GGTAAGGTTGGTAAAAAGGGTAAGCAAGATTGTAGCCATTGGTGTCTACCGGGAGTCCCC
GATGCATGGAATGAGCTAATCTATGCCACTTTGGTGTTGCAACAATGA