Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048240
CDS Infomation

pacid=37431088 polypeptide=PGSC0003DMP400032662 locus=PGSC0003DMG401018740 ID=PGSC0003DMT400048240.v4.03 annot-version=v4.03
Sequence

ATGGCATTATTTTCATCAAGAAATTCATCAAGGTCAAGATCCTCTCTTCCATATTTGGTG
TTCCTCTTAATTGCTGCTTTTTTTGTCTTCAAGGTAGATATACTCATATCTCAGTCTTTT
AGTTCAGCCCGTCGCAACCTGGAAAAAACTCCTAATCGTATTGTAGTGAACCCCAAAAAA
TCATCAGAAGAACGTGTTGTTGACAGCCTCCCTGTAGTTTTAGTTAATGGTACATTTGAC
CAGCATATTATGATATCATGGGGAGAAGACAGGGGAAAAATACTTGAAAATGGAGAGTTT
TTAACACTCTCCTTAGACAAGTTGTCTGGATCAGGCTTTCAGTCTAAAAAAGAGTACCTC
TTTGCTAAAGTTGATATGCAAATTAAGCTCGTCCCCGGAAACTCTGCTGGCACTGTTACT
ACATTTTACCTATCATCACAAGGGAACAAGCATGATGAAATAGATTTTGAATTCTTGGGA
AATTCAACAGGGAACCCTTATACTCTTCATACTAATGTTTTTAGTCTAGGCCAAGGCAAT
AGGGAACAACAATTCTTCTTGTGGTTTGATCCAACTGCAGATTATCACACATATTCAATC
CTATGGAATTCTAAATGTATTATATTCTACGTTGATGGTATACCAATTAGAGAGTACAAG
AATCTAGAGAGACTTGGTGTGTCATATTTAAAATTCCAACCAATGAGACTATACTCAAGT
CTATGGAACGCAGATGATTGGGCTACACAAGGTGGCCGTGTCAAAACCAATTGGAAATTA
GCACCTTTTGTAGCGTCCTACAAAAATTTCACATATGAAGCTTGTATTTATTCAAGATTA
ACTAGCTCGTCTTCATGTGATATAGACTCTCCTCCTTCTACCAACAACGCTTGGTTAACA
TATGAGTTAGATCGAAGAAGTCGTGTTAGAATGAAAGCATTGCAGAAAAAACATATGATT
TATGATTATTGCAACGATAAATGGAGATTTCCTAAAGGTCCTGCTCCTGAATGCAAGCTT
CTTCAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400032662
PEP Infomation

pacid=37431088 transcript=PGSC0003DMT400048240 locus=PGSC0003DMG401018740 ID=PGSC0003DMT400048240.v4.03 annot-version=v4.03
Sequence

MALFSSRNSSRSRSSLPYLVFLLIAAFFVFKVDILISQSFSSARRNLEKTPNRIVVNPKK
SSEERVVDSLPVVLVNGTFDQHIMISWGEDRGKILENGEFLTLSLDKLSGSGFQSKKEYL
FAKVDMQIKLVPGNSAGTVTTFYLSSQGNKHDEIDFEFLGNSTGNPYTLHTNVFSLGQGN
REQQFFLWFDPTADYHTYSILWNSKCIIFYVDGIPIREYKNLERLGVSYLKFQPMRLYSS
LWNADDWATQGGRVKTNWKLAPFVASYKNFTYEACIYSRLTSSSSCDIDSPPSTNNAWLT
YELDRRSRVRMKALQKKHMIYDYCNDKWRFPKGPAPECKLLQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400048240
Transcript Infomation

pacid=37431088 locus=PGSC0003DMG401018740 ID=PGSC0003DMT400048240.v4.03 annot-version=v4.03
Sequence

ATGGCATTATTTTCATCAAGAAATTCATCAAGGTCAAGATCCTCTCTTCCATATTTGGTG
TTCCTCTTAATTGCTGCTTTTTTTGTCTTCAAGGTAGATATACTCATATCTCAGTCTTTT
AGTTCAGCCCGTCGCAACCTGGAAAAAACTCCTAATCGTATTGTAGTGAACCCCAAAAAA
TCATCAGAAGAACGTGTTGTTGACAGCCTCCCTGTAGTTTTAGTTAATGGTACATTTGAC
CAGCATATTATGATATCATGGGGAGAAGACAGGGGAAAAATACTTGAAAATGGAGAGTTT
TTAACACTCTCCTTAGACAAGTTGTCTGGATCAGGCTTTCAGTCTAAAAAAGAGTACCTC
TTTGCTAAAGTTGATATGCAAATTAAGCTCGTCCCCGGAAACTCTGCTGGCACTGTTACT
ACATTTTACCTATCATCACAAGGGAACAAGCATGATGAAATAGATTTTGAATTCTTGGGA
AATTCAACAGGGAACCCTTATACTCTTCATACTAATGTTTTTAGTCTAGGCCAAGGCAAT
AGGGAACAACAATTCTTCTTGTGGTTTGATCCAACTGCAGATTATCACACATATTCAATC
CTATGGAATTCTAAATGTATTATATTCTACGTTGATGGTATACCAATTAGAGAGTACAAG
AATCTAGAGAGACTTGGTGTGTCATATTTAAAATTCCAACCAATGAGACTATACTCAAGT
CTATGGAACGCAGATGATTGGGCTACACAAGGTGGCCGTGTCAAAACCAATTGGAAATTA
GCACCTTTTGTAGCGTCCTACAAAAATTTCACATATGAAGCTTGTATTTATTCAAGATTA
ACTAGCTCGTCTTCATGTGATATAGACTCTCCTCCTTCTACCAACAACGCTTGGTTAACA
TATGAGTTAGATCGAAGAAGTCGTGTTAGAATGAAAGCATTGCAGAAAAAACATATGATT
TATGATTATTGCAACGATAAATGGAGATTTCCTAAAGGTCCTGCTCCTGAATGCAAGCTT
CTTCAATAA