Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048225
CDS Infomation

pacid=37431541 polypeptide=PGSC0003DMP400032650 locus=PGSC0003DMG400018735 ID=PGSC0003DMT400048225.v4.03 annot-version=v4.03
Sequence

ATGACTTATGCTACTCACGTTCTTCGTCACTCCAAAAAGATCGGGAGTTCTTCGAACTTG
ATACGACATGACTCTGCTGTTCTTGTCCGTTGGTTTAGTAATGGCATGAGGCCTTCTATG
GAGAAGGGAGATGATATTTTAAGGTGCCAGTCTGGTCTCATATCCGGAGAGAGACACAAC
ATTCCTAAGTCCTTCAATAGATGCTACTCAGGTTCAGCTGTCTCCAACAACAGTTGTAGA
ACAGTATCTCCCAGGATGTCATGTGGAAATGCTCTGAGAACTACAATTGCTCCATGCACC
TCCACCGGTAGCATGTCTTTCATTAGAAGGTCTTCGGGATCACAAGCGCCTTCAAGGAGG
GGTTTCTCCAGTGCTTCAGATCTTCCTCCACACCAAGCGATTGGGATGCCTTCTCTTTCA
CCTACAATGACAGAGGGAAATATTGCCAGATGGTTAAAGAAAGAGGGTGATAAAGTTTCT
CCTGGTGAAGTGCTCTGTGAAGTGGAAACAGATAAAGCAACAGTGGAGATGGAGTGCATG
GAAGAAGGATATCTAGCTAAGATTCTTCACGGAGACGGAGCAAGCAGTATCAAAGTTGGA
GAGGTGATCGCTGTTACTGTTGAAGAGGAAGATGACATTGCAAAATTTAAAGATTACCAG
CCTTCAACATCAGATGCCACGCCTTCACCAAAAGCTCCTGCTTCTCCACCTCCTCCCAAA
GAAGAGGTTGCCGAGAAACCTGTTACTCCATCACAGCCAAAAGTTTCTAAACCTAGTGCG
GCGGATCGCATTTTTGCTAGTCCGCTAGCTAGGAAAATTGCGGAAGATCACAATATACCT
CTCACAAACATCAAAGGAACAGGTCCTGAGGGACGTATCGTGAAAGCTGATATTGATGAT
TATCTTGCGTCACGCGGAAAGGATGCCCCTGCAGCAGCTCCCAAGGCTGACACATCTCTA
GATTACATGGATATTCCTGTTGCACAGATCAGAAAGGTGACAGCTTCTAGGTTGCTGTTG
TCAAAGCAAACCATTCCCCATTACTATTTGACTGTTGATACATGCGTCGACAAACTTATA
GAACTGAGGAGCAGGCTCAATTCATTGCAAGAGGCTTCAGGAGGAAAGAAGTTATCTGTT
AATGATCTTGTAATAAAGGCTGCTGCTTTGGCTCTTCGAAAAGTTCCTCAGTGCAACAGT
TCATGGACCAATGACTACATTCGTCAGTATCACAATGTAAATATCAATGTAGCAGTGCAG
ACTGACAATGGTCTTTATGTTCCTGTCGTCCGGGATGCTGATAAGAAAGGTTTATCCACT
ATTTCCGAGGAAGTGAAGAACTTAGCCCAGAAAGCAAAAGAGAACAGCTTAAAACCACAG
GATTATGAGGGTGGGACATTCACCGTCAGCAATTTGGGAGGGCCTTTTGGCATTAAACAG
TTCTGTGCCATCATTAACCCTCCACAATCAGCCATCCTAGCAGTTGGATCTGCTGAGAAA
AGGGTGCTTCCAGGATCCAGTGAAGGCCAGTATAAGTTTGCCAGTATGATGTCTGTTACA
TTGAGCTGTGATCACCGGGTGATTGATGGCGCAATTGGTGCAGAATGGCTCAAAGCATTC
AAAGGCTACATAGAGAGTCCCGAGTCTATGTTACTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400032650
PEP Infomation

pacid=37431541 transcript=PGSC0003DMT400048225 locus=PGSC0003DMG400018735 ID=PGSC0003DMT400048225.v4.03 annot-version=v4.03
Sequence

MTYATHVLRHSKKIGSSSNLIRHDSAVLVRWFSNGMRPSMEKGDDILRCQSGLISGERHN
IPKSFNRCYSGSAVSNNSCRTVSPRMSCGNALRTTIAPCTSTGSMSFIRRSSGSQAPSRR
GFSSASDLPPHQAIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECM
EEGYLAKILHGDGASSIKVGEVIAVTVEEEDDIAKFKDYQPSTSDATPSPKAPASPPPPK
EEVAEKPVTPSQPKVSKPSAADRIFASPLARKIAEDHNIPLTNIKGTGPEGRIVKADIDD
YLASRGKDAPAAAPKADTSLDYMDIPVAQIRKVTASRLLLSKQTIPHYYLTVDTCVDKLI
ELRSRLNSLQEASGGKKLSVNDLVIKAAALALRKVPQCNSSWTNDYIRQYHNVNINVAVQ
TDNGLYVPVVRDADKKGLSTISEEVKNLAQKAKENSLKPQDYEGGTFTVSNLGGPFGIKQ
FCAIINPPQSAILAVGSAEKRVLPGSSEGQYKFASMMSVTLSCDHRVIDGAIGAEWLKAF
KGYIESPESMLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400048225
Transcript Infomation

pacid=37431541 locus=PGSC0003DMG400018735 ID=PGSC0003DMT400048225.v4.03 annot-version=v4.03
Sequence

ATGACTTATGCTACTCACGTTCTTCGTCACTCCAAAAAGATCGGGAGTTCTTCGAACTTG
ATACGACATGACTCTGCTGTTCTTGTCCGTTGGTTTAGTAATGGCATGAGGCCTTCTATG
GAGAAGGGAGATGATATTTTAAGGTGCCAGTCTGGTCTCATATCCGGAGAGAGACACAAC
ATTCCTAAGTCCTTCAATAGATGCTACTCAGGTTCAGCTGTCTCCAACAACAGTTGTAGA
ACAGTATCTCCCAGGATGTCATGTGGAAATGCTCTGAGAACTACAATTGCTCCATGCACC
TCCACCGGTAGCATGTCTTTCATTAGAAGGTCTTCGGGATCACAAGCGCCTTCAAGGAGG
GGTTTCTCCAGTGCTTCAGATCTTCCTCCACACCAAGCGATTGGGATGCCTTCTCTTTCA
CCTACAATGACAGAGGGAAATATTGCCAGATGGTTAAAGAAAGAGGGTGATAAAGTTTCT
CCTGGTGAAGTGCTCTGTGAAGTGGAAACAGATAAAGCAACAGTGGAGATGGAGTGCATG
GAAGAAGGATATCTAGCTAAGATTCTTCACGGAGACGGAGCAAGCAGTATCAAAGTTGGA
GAGGTGATCGCTGTTACTGTTGAAGAGGAAGATGACATTGCAAAATTTAAAGATTACCAG
CCTTCAACATCAGATGCCACGCCTTCACCAAAAGCTCCTGCTTCTCCACCTCCTCCCAAA
GAAGAGGTTGCCGAGAAACCTGTTACTCCATCACAGCCAAAAGTTTCTAAACCTAGTGCG
GCGGATCGCATTTTTGCTAGTCCGCTAGCTAGGAAAATTGCGGAAGATCACAATATACCT
CTCACAAACATCAAAGGAACAGGTCCTGAGGGACGTATCGTGAAAGCTGATATTGATGAT
TATCTTGCGTCACGCGGAAAGGATGCCCCTGCAGCAGCTCCCAAGGCTGACACATCTCTA
GATTACATGGATATTCCTGTTGCACAGATCAGAAAGGTGACAGCTTCTAGGTTGCTGTTG
TCAAAGCAAACCATTCCCCATTACTATTTGACTGTTGATACATGCGTCGACAAACTTATA
GAACTGAGGAGCAGGCTCAATTCATTGCAAGAGGCTTCAGGAGGAAAGAAGTTATCTGTT
AATGATCTTGTAATAAAGGCTGCTGCTTTGGCTCTTCGAAAAGTTCCTCAGTGCAACAGT
TCATGGACCAATGACTACATTCGTCAGTATCACAATGTAAATATCAATGTAGCAGTGCAG
ACTGACAATGGTCTTTATGTTCCTGTCGTCCGGGATGCTGATAAGAAAGGTTTATCCACT
ATTTCCGAGGAAGTGAAGAACTTAGCCCAGAAAGCAAAAGAGAACAGCTTAAAACCACAG
GATTATGAGGGTGGGACATTCACCGTCAGCAATTTGGGAGGGCCTTTTGGCATTAAACAG
TTCTGTGCCATCATTAACCCTCCACAATCAGCCATCCTAGCAGTTGGATCTGCTGAGAAA
AGGGTGCTTCCAGGATCCAGTGAAGGCCAGTATAAGTTTGCCAGTATGATGTCTGTTACA
TTGAGCTGTGATCACCGGGTGATTGATGGCGCAATTGGTGCAGAATGGCTCAAAGCATTC
AAAGGCTACATAGAGAGTCCCGAGTCTATGTTACTGTAG